Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4148

Experiment: L-Lysine 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 25 mM
4,827,225	+		Pf6N2E2_4147	0.36	+0.2
4,827,225	+		Pf6N2E2_4147	0.36	+0.0
4,827,225	+		Pf6N2E2_4147	0.36	+0.4
4,827,225	+		Pf6N2E2_4147	0.36	+0.8
4,827,226	-		Pf6N2E2_4147	0.37	-0.2
4,827,387	+		Pf6N2E2_4147	0.50	-0.0
4,827,387	+		Pf6N2E2_4147	0.50	+0.5
4,827,388	-		Pf6N2E2_4147	0.50	+0.2
4,827,388	-		Pf6N2E2_4147	0.50	-0.3
4,827,528	+		Pf6N2E2_4147	0.61	+0.8
4,827,528	+		Pf6N2E2_4147	0.61	-0.2
4,827,529	-		Pf6N2E2_4147	0.61	-0.0
4,827,529	-		Pf6N2E2_4147	0.61	-0.7
4,827,529	-		Pf6N2E2_4147	0.61	+0.1
4,827,529	-		Pf6N2E2_4147	0.61	+0.1
4,828,011	+				+0.6
4,828,011	+				+0.7
4,828,011	+				-0.3
4,828,011	+				-0.8
4,828,011	+				+0.4
4,828,012	-				+0.5
4,828,012	-				+0.4
4,828,012	-				-0.7
4,828,012	-				+0.7
4,828,012	-				-0.1
4,828,012	-				-1.2
4,828,083	+				+1.6
4,828,083	+				+1.0
4,828,083	+				+0.4
4,828,083	+				+0.9
4,828,084	-				-1.2
4,828,084	-				-0.3
4,828,086	+				+0.9
4,828,086	+				+0.2
4,828,086	+				+0.2
4,828,086	+				+0.8
4,828,086	+				+0.5
4,828,087	-				+0.6
4,828,087	-				-2.2
4,828,087	-				+0.5
4,828,211	+				+1.2
4,828,211	+				-0.6
4,828,211	+				-0.6
4,828,211	+				+0.1
4,828,211	+				-0.0
4,828,211	+				-0.1
4,828,211	+				+0.1
4,828,211	+				+1.1
4,828,212	-				+1.0
4,828,212	-				+0.5
4,828,212	-				+0.8
4,828,212	-				+0.4
4,828,212	-				+0.7
4,828,212	-				+1.2
4,828,212	-				+0.1
4,828,463	+		Pf6N2E2_4148	0.26	+0.8
4,828,631	+		Pf6N2E2_4148	0.38	+0.5
4,828,742	+		Pf6N2E2_4148	0.47	+1.2
4,828,742	+		Pf6N2E2_4148	0.47	+2.2
4,828,743	-		Pf6N2E2_4148	0.47	+1.3
4,828,839	-		Pf6N2E2_4148	0.54	+1.0
4,828,951	+		Pf6N2E2_4148	0.62	+0.8
4,828,952	-		Pf6N2E2_4148	0.62	-0.1
4,829,078	+		Pf6N2E2_4148	0.72	+2.2
4,829,078	+		Pf6N2E2_4148	0.72	+0.8
4,829,078	+				+3.6
4,829,078	+		Pf6N2E2_4148	0.72	+1.0
4,829,079	-		Pf6N2E2_4148	0.72	+0.6
4,829,079	-		Pf6N2E2_4148	0.72	+0.4
4,829,079	-		Pf6N2E2_4148	0.72	+0.8
4,829,088	+		Pf6N2E2_4148	0.73	+1.1
4,829,089	-		Pf6N2E2_4148	0.73	+1.4
4,829,192	+		Pf6N2E2_4148	0.80	+0.8
4,829,192	+		Pf6N2E2_4148	0.80	+0.6
4,829,192	+		Pf6N2E2_4148	0.80	+1.3
4,829,192	+		Pf6N2E2_4148	0.80	+1.2
4,829,192	+		Pf6N2E2_4148	0.80	+1.2
4,829,193	-		Pf6N2E2_4148	0.81	+1.1
4,829,193	-		Pf6N2E2_4148	0.81	+0.9
4,829,308	-		Pf6N2E2_4148	0.89	+0.5
4,829,434	+				+1.4
4,829,434	+				+1.4
4,829,451	+				+0.9
4,829,451	+				+0.8
4,829,451	+				+1.5
4,829,451	+				+1.6
4,829,451	+				+0.7
4,829,452	-				-0.1
4,829,452	-				+0.1
4,829,452	-				+0.6
4,829,458	-				+0.9
4,829,458	-				+0.6
4,829,463	+				+0.1
4,829,464	-				+0.8
4,829,464	-				+0.0
4,829,464	-				+0.0
4,829,464	-				+0.4
4,829,535	+				+1.3
4,829,535	+				+1.2
4,829,535	+				+0.4
4,829,535	+				+1.2
4,829,536	-				-3.2
4,829,536	-				-0.1
4,829,536	-				+0.5
4,829,537	+				+0.5
4,829,537	+				-0.0
4,829,537	+				+1.2
4,829,537	+				+1.2
4,829,537	+				+0.2
4,829,537	+				+1.2
4,829,538	-				+0.3
4,829,538	-				-1.7
4,829,538	-				+0.7
4,829,538	-				-1.6
4,829,538	-				-0.7
4,829,591	+				+1.3
4,829,591	+				+1.7
4,829,591	+				+1.2
4,829,591	+				+0.5
4,829,591	+				+1.1
4,829,592	-				+1.0
4,829,592	-				+0.6
4,829,702	+				-0.6
4,829,702	+				+0.6
4,829,702	+				-0.0
4,829,702	+				+0.1
4,829,702	+				-0.2
4,829,702	+				-0.9
4,829,702	+				-0.1
4,829,703	-				+0.6
4,829,703	-				-0.5
4,829,712	+				+0.2
4,829,712	+				+0.1
4,829,712	+				-0.3
4,829,712	+				+0.5
4,829,712	+				-0.8
4,829,712	+				-0.1
4,829,712	+				-0.0
4,829,712	+				-0.0
4,829,712	+				-0.5
4,829,712	+				-0.6
4,829,712	+				+0.5
4,829,713	-				+0.9
4,829,713	-				-0.5
4,829,713	-				+0.8
4,829,713	-				-0.1
4,829,713	-				-0.1
4,829,713	-				+1.0
4,829,713	-				+1.1
4,829,713	-				+0.7
4,829,740	+				+0.3
4,829,740	+				-0.1
4,829,815	+				-1.0
4,829,816	-				+0.7
4,829,824	-				-0.6
4,829,835	+				+0.7
4,829,835	+				+0.3
4,829,835	+				-0.2
4,829,835	+				+0.0
4,829,835	+				+0.2
4,829,835	+				+0.1
4,829,835	+				-0.0
4,829,835	+				+0.5
4,829,835	+				+0.5
4,829,835	+				+0.1
4,829,835	+				-0.6
4,829,835	+				+0.5
4,829,836	-				-0.1
4,829,836	-				+0.4
4,829,836	-				-0.9
4,829,836	-				+0.3
4,829,836	-				+0.3
4,829,836	-				-0.1
4,829,836	-				-0.7
4,829,855	+				+0.3
4,829,856	-				+0.4
4,829,954	+				-0.8
4,829,954	+				+0.2
4,829,954	+				+0.6
4,829,955	-				+0.3
4,830,044	+				-0.9
4,830,044	+				-0.1
4,830,045	-				+0.6
4,830,045	-				-0.6
4,830,160	-				-1.0
4,830,191	+				-0.1
4,830,300	+		Pf6N2E2_4149	0.31	+0.0
4,830,300	+		Pf6N2E2_4149	0.31	-0.3
4,830,300	+		Pf6N2E2_4149	0.31	+0.4
4,830,301	-		Pf6N2E2_4149	0.31	+0.3
4,830,301	-		Pf6N2E2_4149	0.31	-0.3
4,830,301	-		Pf6N2E2_4149	0.31	+0.5
4,830,301	-		Pf6N2E2_4149	0.31	+0.4
4,830,356	-		Pf6N2E2_4149	0.43	+0.4
4,830,356	-		Pf6N2E2_4149	0.43	+0.5
4,830,387	+		Pf6N2E2_4149	0.50	-0.0
4,830,387	+		Pf6N2E2_4149	0.50	+0.4
4,830,387	+		Pf6N2E2_4149	0.50	-1.0
4,830,387	+		Pf6N2E2_4149	0.50	-0.9
4,830,387	+		Pf6N2E2_4149	0.50	-0.1
4,830,387	+		Pf6N2E2_4149	0.50	-0.6
4,830,387	+		Pf6N2E2_4149	0.50	-0.2
4,830,387	+		Pf6N2E2_4149	0.50	-0.2
4,830,388	-		Pf6N2E2_4149	0.50	+0.4
4,830,388	-		Pf6N2E2_4149	0.50	+0.1
4,830,388	-		Pf6N2E2_4149	0.50	+0.4
4,830,388	-		Pf6N2E2_4149	0.50	-0.2
4,830,388	-		Pf6N2E2_4149	0.50	+0.1
4,830,388	-		Pf6N2E2_4149	0.50	+0.3
4,830,388	-		Pf6N2E2_4149	0.50	+0.6
4,830,388	-		Pf6N2E2_4149	0.50	+0.7
4,830,388	-		Pf6N2E2_4149	0.50	+0.4
4,830,388	-		Pf6N2E2_4149	0.50	-2.2
4,830,388	-		Pf6N2E2_4149	0.50	+0.6
4,830,388	-		Pf6N2E2_4149	0.50	-0.4