Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4637

Experiment: Thallium(I) acetate 0.0006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4636 and Ac3H11_4637 are separated by 18 nucleotidesAc3H11_4637 and Ac3H11_4638 are separated by 257 nucleotides Ac3H11_4636 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 242,691 to 244,421 _4636 Ac3H11_4637 - hypothetical protein, at 244,440 to 244,583 _4637 Ac3H11_4638 - hypothetical protein, at 244,841 to 245,737 _4638 Position (kb) 244 245Strain fitness (log2 ratio) -1 0 1 2 3 4at 243.675 kb on + strand, within Ac3H11_4636at 243.675 kb on + strand, within Ac3H11_4636at 243.675 kb on + strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 243.676 kb on - strand, within Ac3H11_4636at 244.070 kb on + strand, within Ac3H11_4636at 244.070 kb on + strand, within Ac3H11_4636at 244.070 kb on + strand, within Ac3H11_4636at 244.071 kb on - strand, within Ac3H11_4636at 244.120 kb on + strand, within Ac3H11_4636at 244.120 kb on + strand, within Ac3H11_4636at 244.121 kb on - strand, within Ac3H11_4636at 244.556 kb on + strand, within Ac3H11_4637at 244.556 kb on + strand, within Ac3H11_4637at 244.556 kb on + strand, within Ac3H11_4637at 244.557 kb on - strand, within Ac3H11_4637at 244.557 kb on - strand, within Ac3H11_4637at 244.557 kb on - strand, within Ac3H11_4637at 244.557 kb on - strand, within Ac3H11_4637at 244.557 kb on - strand, within Ac3H11_4637at 244.588 kb on + strandat 244.628 kb on + strandat 244.629 kb on - strandat 244.811 kb on + strandat 244.812 kb on - strandat 244.812 kb on - strandat 244.813 kb on + strandat 244.813 kb on + strandat 244.814 kb on - strandat 244.814 kb on - strandat 244.814 kb on - strandat 244.814 kb on - strandat 244.821 kb on + strandat 244.840 kb on + strandat 244.840 kb on + strandat 244.840 kb on + strandat 244.840 kb on + strandat 244.841 kb on - strandat 244.841 kb on - strandat 244.841 kb on - strandat 244.841 kb on - strandat 244.841 kb on - strandat 244.841 kb on - strandat 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.099 kb on + strand, within Ac3H11_4638at 245.100 kb on - strand, within Ac3H11_4638at 245.100 kb on - strand, within Ac3H11_4638at 245.126 kb on + strand, within Ac3H11_4638at 245.126 kb on + strand, within Ac3H11_4638at 245.126 kb on + strand, within Ac3H11_4638at 245.127 kb on - strand, within Ac3H11_4638at 245.127 kb on - strand, within Ac3H11_4638at 245.348 kb on + strand, within Ac3H11_4638at 245.348 kb on + strand, within Ac3H11_4638at 245.348 kb on + strand, within Ac3H11_4638at 245.348 kb on + strand, within Ac3H11_4638at 245.349 kb on - strand, within Ac3H11_4638at 245.349 kb on - strand, within Ac3H11_4638at 245.402 kb on + strand, within Ac3H11_4638at 245.402 kb on + strand, within Ac3H11_4638at 245.403 kb on - strand, within Ac3H11_4638at 245.403 kb on - strand, within Ac3H11_4638at 245.403 kb on - strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.408 kb on + strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.409 kb on - strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.441 kb on + strand, within Ac3H11_4638at 245.442 kb on - strand, within Ac3H11_4638at 245.442 kb on - strand, within Ac3H11_4638at 245.442 kb on - strand, within Ac3H11_4638at 245.442 kb on - strand, within Ac3H11_4638at 245.442 kb on - strand, within Ac3H11_4638

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.0006 mg/ml
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243,675 + Ac3H11_4636 0.57 +0.6
243,675 + Ac3H11_4636 0.57 +0.5
243,675 + Ac3H11_4636 0.57 +0.3
243,676 - Ac3H11_4636 0.57 +0.3
243,676 - Ac3H11_4636 0.57 +0.9
243,676 - Ac3H11_4636 0.57 -0.1
243,676 - Ac3H11_4636 0.57 +0.6
243,676 - Ac3H11_4636 0.57 +0.8
243,676 - Ac3H11_4636 0.57 -0.0
243,676 - Ac3H11_4636 0.57 -1.6
244,070 + Ac3H11_4636 0.80 -1.1
244,070 + Ac3H11_4636 0.80 -0.3
244,070 + Ac3H11_4636 0.80 +0.7
244,071 - Ac3H11_4636 0.80 -0.3
244,120 + Ac3H11_4636 0.83 +0.4
244,120 + Ac3H11_4636 0.83 +1.5
244,121 - Ac3H11_4636 0.83 +0.4
244,556 + Ac3H11_4637 0.81 +0.6
244,556 + Ac3H11_4637 0.81 +0.1
244,556 + Ac3H11_4637 0.81 +1.4
244,557 - Ac3H11_4637 0.81 +0.2
244,557 - Ac3H11_4637 0.81 +0.6
244,557 - Ac3H11_4637 0.81 +1.5
244,557 - Ac3H11_4637 0.81 +0.4
244,557 - Ac3H11_4637 0.81 +0.0
244,588 + -0.3
244,628 + +0.1
244,629 - +0.6
244,811 + +0.9
244,812 - +0.1
244,812 - +1.6
244,813 + +0.8
244,813 + +0.3
244,814 - +0.4
244,814 - -0.6
244,814 - -0.2
244,814 - -0.0
244,821 + +0.3
244,840 + +0.7
244,840 + +0.7
244,840 + -1.1
244,840 + +0.1
244,841 - -0.5
244,841 - +0.1
244,841 - +0.1
244,841 - -0.4
244,841 - -0.5
244,841 - +0.3
245,099 + Ac3H11_4638 0.29 +0.6
245,099 + Ac3H11_4638 0.29 -1.1
245,099 + Ac3H11_4638 0.29 -0.2
245,099 + Ac3H11_4638 0.29 +0.8
245,099 + Ac3H11_4638 0.29 -0.1
245,099 + Ac3H11_4638 0.29 +0.2
245,099 + Ac3H11_4638 0.29 +0.8
245,099 + Ac3H11_4638 0.29 -0.4
245,099 + Ac3H11_4638 0.29 +0.3
245,100 - Ac3H11_4638 0.29 -0.4
245,100 - Ac3H11_4638 0.29 +2.0
245,126 + Ac3H11_4638 0.32 -0.4
245,126 + Ac3H11_4638 0.32 +0.5
245,126 + Ac3H11_4638 0.32 +1.2
245,127 - Ac3H11_4638 0.32 +0.1
245,127 - Ac3H11_4638 0.32 +0.7
245,348 + Ac3H11_4638 0.57 +0.2
245,348 + Ac3H11_4638 0.57 +0.4
245,348 + Ac3H11_4638 0.57 +1.0
245,348 + Ac3H11_4638 0.57 +1.2
245,349 - Ac3H11_4638 0.57 +0.8
245,349 - Ac3H11_4638 0.57 +0.4
245,402 + Ac3H11_4638 0.63 +0.2
245,402 + Ac3H11_4638 0.63 -0.0
245,403 - Ac3H11_4638 0.63 +2.0
245,403 - Ac3H11_4638 0.63 -0.6
245,403 - Ac3H11_4638 0.63 -0.8
245,408 + Ac3H11_4638 0.63 -0.1
245,408 + Ac3H11_4638 0.63 +0.7
245,408 + Ac3H11_4638 0.63 +0.4
245,408 + Ac3H11_4638 0.63 -0.2
245,408 + Ac3H11_4638 0.63 +0.6
245,408 + Ac3H11_4638 0.63 -0.1
245,408 + Ac3H11_4638 0.63 -0.1
245,409 - Ac3H11_4638 0.63 -0.5
245,409 - Ac3H11_4638 0.63 +0.3
245,409 - Ac3H11_4638 0.63 +0.6
245,409 - Ac3H11_4638 0.63 +0.4
245,409 - Ac3H11_4638 0.63 +0.2
245,409 - Ac3H11_4638 0.63 +1.3
245,409 - Ac3H11_4638 0.63 +1.1
245,409 - Ac3H11_4638 0.63 +0.4
245,409 - Ac3H11_4638 0.63 +1.4
245,409 - Ac3H11_4638 0.63 -0.2
245,409 - Ac3H11_4638 0.63 +0.0
245,409 - Ac3H11_4638 0.63 +0.8
245,409 - Ac3H11_4638 0.63 -0.5
245,409 - Ac3H11_4638 0.63 +1.0
245,409 - Ac3H11_4638 0.63 +1.0
245,409 - Ac3H11_4638 0.63 +0.4
245,409 - Ac3H11_4638 0.63 +0.4
245,409 - Ac3H11_4638 0.63 -0.3
245,409 - Ac3H11_4638 0.63 +0.5
245,441 + Ac3H11_4638 0.67 -0.2
245,441 + Ac3H11_4638 0.67 -1.2
245,441 + Ac3H11_4638 0.67 -1.2
245,441 + Ac3H11_4638 0.67 +0.2
245,441 + Ac3H11_4638 0.67 +1.5
245,441 + Ac3H11_4638 0.67 +1.4
245,441 + Ac3H11_4638 0.67 +0.3
245,441 + Ac3H11_4638 0.67 +1.3
245,441 + Ac3H11_4638 0.67 -0.3
245,441 + Ac3H11_4638 0.67 +4.0
245,441 + Ac3H11_4638 0.67 +0.9
245,441 + Ac3H11_4638 0.67 +0.5
245,442 - Ac3H11_4638 0.67 -0.2
245,442 - Ac3H11_4638 0.67 +2.4
245,442 - Ac3H11_4638 0.67 +1.1
245,442 - Ac3H11_4638 0.67 +0.9
245,442 - Ac3H11_4638 0.67 +0.6

Or see this region's nucleotide sequence