Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_154
Experiment: Thallium(I) acetate 0.0006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.0006 mg/ml |
---|---|---|---|---|---|
remove | |||||
39,894 | - | Ac3H11_153 | 0.82 | -0.2 | |
39,894 | - | Ac3H11_153 | 0.82 | +0.0 | |
39,894 | - | Ac3H11_153 | 0.82 | +0.4 | |
40,173 | - | Ac3H11_153 | 0.90 | -0.4 | |
40,192 | + | +1.3 | |||
40,193 | - | +0.2 | |||
40,193 | - | +0.1 | |||
40,193 | - | -0.1 | |||
40,193 | - | -0.7 | |||
40,193 | - | +0.2 | |||
40,573 | - | -1.3 | |||
40,573 | - | +0.9 | |||
40,656 | + | -0.7 | |||
40,656 | + | +0.5 | |||
40,656 | + | +0.3 | |||
40,668 | + | -0.6 | |||
40,669 | - | +0.7 | |||
40,968 | + | Ac3H11_154 | 0.32 | -0.5 | |
40,969 | - | Ac3H11_154 | 0.33 | -0.7 | |
40,969 | - | Ac3H11_154 | 0.33 | -1.0 | |
41,133 | + | Ac3H11_154 | 0.49 | +0.2 | |
41,133 | + | Ac3H11_154 | 0.49 | +0.5 | |
41,134 | - | Ac3H11_154 | 0.50 | -0.2 | |
41,220 | + | Ac3H11_154 | 0.58 | +0.4 | |
41,220 | + | Ac3H11_154 | 0.58 | +0.3 | |
41,221 | - | Ac3H11_154 | 0.59 | +0.7 | |
41,708 | + | -0.4 | |||
41,709 | - | -0.7 | |||
42,116 | + | Ac3H11_155 | 0.35 | -0.1 | |
42,117 | - | Ac3H11_155 | 0.35 | +0.1 | |
42,245 | + | Ac3H11_155 | 0.45 | -0.9 | |
42,246 | - | Ac3H11_155 | 0.45 | -0.1 | |
42,246 | - | Ac3H11_155 | 0.45 | -1.4 | |
42,246 | - | Ac3H11_155 | 0.45 | -0.9 | |
42,305 | + | Ac3H11_155 | 0.50 | -0.6 | |
42,383 | + | Ac3H11_155 | 0.56 | -0.2 | |
42,384 | - | Ac3H11_155 | 0.56 | -1.0 |
Or see this region's nucleotide sequence