Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13390

Experiment: Tetracycline 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0016 mg/ml
2,968,575	+		AO353_13385	0.21	+0.9
2,968,660	+		AO353_13385	0.30	+0.9
2,968,661	-		AO353_13385	0.31	+1.6
2,968,661	-		AO353_13385	0.31	-1.2
2,968,661	-		AO353_13385	0.31	-0.5
2,968,661	-		AO353_13385	0.31	+1.1
2,968,677	+		AO353_13385	0.32	-3.2
2,968,677	+		AO353_13385	0.32	-0.7
2,968,677	+		AO353_13385	0.32	-1.0
2,968,677	+		AO353_13385	0.32	-0.7
2,968,678	-		AO353_13385	0.32	+1.5
2,968,678	-		AO353_13385	0.32	-0.7
2,968,678	-		AO353_13385	0.32	+0.7
2,968,746	+		AO353_13385	0.40	-0.4
2,968,774	+		AO353_13385	0.43	+0.0
2,968,774	+		AO353_13385	0.43	-0.7
2,968,774	+		AO353_13385	0.43	-0.2
2,968,774	+		AO353_13385	0.43	-0.5
2,968,774	+		AO353_13385	0.43	+0.2
2,968,775	-		AO353_13385	0.43	+0.9
2,968,775	-		AO353_13385	0.43	-2.2
2,968,775	-		AO353_13385	0.43	-0.9
2,968,927	+		AO353_13385	0.60	+0.3
2,968,927	+		AO353_13385	0.60	-0.6
2,968,927	+		AO353_13385	0.60	+0.9
2,968,928	-		AO353_13385	0.60	-0.2
2,969,095	+		AO353_13385	0.78	+0.6
2,969,095	+		AO353_13385	0.78	-0.7
2,969,095	+		AO353_13385	0.78	-2.6
2,969,095	+		AO353_13385	0.78	+0.2
2,969,095	+		AO353_13385	0.78	+0.8
2,969,096	-		AO353_13385	0.79	+0.3
2,969,096	-		AO353_13385	0.79	+0.5
2,969,096	-		AO353_13385	0.79	-1.1
2,969,096	-		AO353_13385	0.79	-1.7
2,969,096	-		AO353_13385	0.79	+0.8
2,969,096	-		AO353_13385	0.79	+1.0
2,969,096	-		AO353_13385	0.79	+0.9
2,969,096	-		AO353_13385	0.79	-0.7
2,969,096	-		AO353_13385	0.79	+0.0
2,969,104	+		AO353_13385	0.79	+0.3
2,969,104	+		AO353_13385	0.79	+0.1
2,969,104	+		AO353_13385	0.79	+0.3
2,969,104	+		AO353_13385	0.79	+1.1
2,969,104	+		AO353_13385	0.79	+0.5
2,969,104	+		AO353_13385	0.79	-0.2
2,969,104	+		AO353_13385	0.79	-1.0
2,969,104	+		AO353_13385	0.79	-0.7
2,969,104	+		AO353_13385	0.79	-0.1
2,969,105	-		AO353_13385	0.80	+1.3
2,969,105	-		AO353_13385	0.80	+0.0
2,969,105	-		AO353_13385	0.80	+0.2
2,969,105	-		AO353_13385	0.80	+0.8
2,969,105	-		AO353_13385	0.80	-0.5
2,969,105	-		AO353_13385	0.80	+1.6
2,969,105	-		AO353_13385	0.80	+0.1
2,969,105	-		AO353_13385	0.80	+0.8
2,969,150	+		AO353_13385	0.85	+0.1
2,969,150	+		AO353_13385	0.85	-1.0
2,969,151	-		AO353_13385	0.85	+1.3
2,969,151	-		AO353_13385	0.85	+0.9
2,969,151	-		AO353_13385	0.85	-1.4
2,969,165	-		AO353_13385	0.86	-0.5
2,969,364	+				-0.4
2,969,364	+				-2.5
2,969,364	+				-1.2
2,969,364	+				-0.7
2,969,365	-				-1.2
2,969,388	+				-1.0
2,969,388	+				-0.4
2,969,388	+				-0.4
2,969,388	+				-0.4
2,969,388	+				-1.8
2,969,388	+				-0.7
2,969,389	-				-2.3
2,969,389	-				-0.2
2,969,389	-				-1.2
2,969,389	-				+0.6
2,969,389	-				-0.7
2,969,389	-				-0.7
2,969,389	-				+0.0
2,969,389	-				+0.7
2,969,389	-				+0.6
2,969,389	-				-1.9
2,969,389	-				-0.6
2,969,389	-				+0.9
2,969,391	+				-1.2
2,969,466	+				+0.3
2,969,502	+				-2.7
2,969,503	-				-2.1
2,969,658	+		AO353_13390	0.18	-1.0
2,969,659	-		AO353_13390	0.18	+0.2
2,969,659	-		AO353_13390	0.18	-1.9
2,969,659	-		AO353_13390	0.18	-1.0
2,969,659	-		AO353_13390	0.18	-0.8
2,969,733	-		AO353_13390	0.24	-0.5
2,969,733	-		AO353_13390	0.24	+1.8
2,969,733	-		AO353_13390	0.24	+0.2
2,969,753	-		AO353_13390	0.26	-1.8
2,969,878	+		AO353_13390	0.37	-2.2
2,970,093	+		AO353_13390	0.56	-1.2
2,970,093	+		AO353_13390	0.56	-0.3
2,970,186	+		AO353_13390	0.64	-3.3
2,970,187	-		AO353_13390	0.64	+0.3
2,970,222	+		AO353_13390	0.68	-0.5
2,970,223	-		AO353_13390	0.68	-2.1
2,970,223	-		AO353_13390	0.68	+0.8
2,970,223	-		AO353_13390	0.68	-0.8
2,970,223	-		AO353_13390	0.68	-0.8
2,970,223	-		AO353_13390	0.68	-0.5
2,970,223	-		AO353_13390	0.68	-0.7
2,970,232	+		AO353_13390	0.68	-2.0
2,970,233	-		AO353_13390	0.69	-1.6
2,970,233	-		AO353_13390	0.69	+0.2
2,970,233	-		AO353_13390	0.69	-0.4
2,970,270	+		AO353_13390	0.72	-1.5
2,970,270	+		AO353_13390	0.72	-0.7
2,970,270	+		AO353_13390	0.72	-3.0
2,970,270	+		AO353_13390	0.72	-1.5
2,970,270	+		AO353_13390	0.72	-1.7
2,970,270	+		AO353_13390	0.72	-1.1
2,970,271	-		AO353_13390	0.72	-1.0
2,970,271	-		AO353_13390	0.72	-2.2
2,970,381	+		AO353_13390	0.82	-1.2
2,970,381	+		AO353_13390	0.82	-0.5
2,970,381	+		AO353_13390	0.82	-1.7
2,970,381	+		AO353_13390	0.82	-2.9
2,970,381	+		AO353_13390	0.82	-0.5
2,970,381	+		AO353_13390	0.82	-0.8
2,970,381	+		AO353_13390	0.82	-0.5
2,970,381	+		AO353_13390	0.82	-0.2
2,970,381	+		AO353_13390	0.82	-1.1
2,970,382	-		AO353_13390	0.82	-0.8
2,970,382	-		AO353_13390	0.82	-0.8
2,970,382	-		AO353_13390	0.82	+3.8
2,970,382	-		AO353_13390	0.82	-1.6
2,970,382	-		AO353_13390	0.82	-0.2
2,970,382	-		AO353_13390	0.82	+0.2
2,970,382	-		AO353_13390	0.82	-0.7
2,970,456	+		AO353_13390	0.88	-1.9
2,970,456	+		AO353_13390	0.88	-0.4
2,970,457	-		AO353_13390	0.88	-1.8
2,970,631	-				-1.3
2,970,631	-				+0.8
2,970,718	-				-1.2
2,970,863	+		AO353_13395	0.14	-0.4
2,970,928	+		AO353_13395	0.25	+0.3
2,970,928	-		AO353_13395	0.25	+1.8
2,971,153	+		AO353_13395	0.65	-1.7
2,971,154	-		AO353_13395	0.65	-1.0
2,971,358	+				-1.1
2,971,358	+				+0.0
2,971,358	+				-1.2
2,971,358	+				-0.5
2,971,359	-				-0.4
2,971,359	-				+0.0
2,971,359	-				+2.1
2,971,359	-				-0.2
2,971,359	-				+1.1
2,971,359	-				+0.7
2,971,359	-				-1.2
2,971,359	-				+0.0
2,971,537	+		AO353_13400	0.23	-2.3
2,971,537	+		AO353_13400	0.23	+1.0
2,971,537	+		AO353_13400	0.23	-2.4