Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08355

Experiment: Tetracycline 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0016 mg/ml
1,835,617	+		AO353_08350	0.26	-0.2
1,835,618	-		AO353_08350	0.26	-1.0
1,835,655	+		AO353_08350	0.29	+0.4
1,835,655	+		AO353_08350	0.29	-0.2
1,835,655	+		AO353_08350	0.29	-0.7
1,835,655	+		AO353_08350	0.29	+1.9
1,835,656	-		AO353_08350	0.29	+0.9
1,835,656	-		AO353_08350	0.29	-2.4
1,835,808	+		AO353_08350	0.41	-0.4
1,835,808	+		AO353_08350	0.41	+0.1
1,835,808	+		AO353_08350	0.41	+0.4
1,835,808	+		AO353_08350	0.41	-2.2
1,835,808	+		AO353_08350	0.41	-1.4
1,835,809	-		AO353_08350	0.41	-1.2
1,835,809	-		AO353_08350	0.41	-0.4
1,835,809	-		AO353_08350	0.41	+0.5
1,835,839	+		AO353_08350	0.44	-0.2
1,836,012	+		AO353_08350	0.58	-1.2
1,836,031	-		AO353_08350	0.60	-2.4
1,836,099	+				+1.8
1,836,099	+		AO353_08350	0.65	+0.4
1,836,099	+		AO353_08350	0.65	-0.9
1,836,099	+		AO353_08350	0.65	+0.2
1,836,099	+		AO353_08350	0.65	-0.4
1,836,100	-		AO353_08350	0.65	-0.3
1,836,100	-		AO353_08350	0.65	+1.2
1,836,100	-		AO353_08350	0.65	-0.6
1,836,121	+		AO353_08350	0.67	-0.2
1,836,121	+		AO353_08350	0.67	-2.2
1,836,121	+		AO353_08350	0.67	-1.1
1,836,121	+		AO353_08350	0.67	-0.6
1,836,122	-		AO353_08350	0.67	+0.8
1,836,122	-		AO353_08350	0.67	+0.8
1,836,122	-		AO353_08350	0.67	+0.9
1,836,122	-		AO353_08350	0.67	-2.2
1,836,122	-		AO353_08350	0.67	+0.6
1,836,133	+		AO353_08350	0.68	-1.3
1,836,134	-		AO353_08350	0.68	-2.4
1,836,189	+		AO353_08350	0.72	-1.6
1,836,189	+		AO353_08350	0.72	+0.8
1,836,228	-		AO353_08350	0.76	+0.5
1,836,414	+				-1.4
1,836,414	+				-0.1
1,836,415	-				-0.9
1,836,415	-				-1.4
1,836,487	+				-1.0
1,836,487	+				+0.4
1,836,487	+				-0.6
1,836,487	+				-0.4
1,836,487	+				-0.9
1,836,487	+				-0.4
1,836,487	+				-1.0
1,836,487	+				+0.2
1,836,488	-				-2.1
1,836,488	-				-2.5
1,836,488	-				-2.4
1,836,488	-				+0.1
1,836,488	-				-1.0
1,836,488	-				-1.2
1,836,488	-				-1.2
1,836,488	-				-1.0
1,836,526	+				-0.3
1,836,526	+				+0.4
1,836,526	+				+1.9
1,836,526	+				+1.1
1,836,526	+				+1.8
1,836,527	-				+1.8
1,836,527	-				-1.4
1,836,527	-				-0.3
1,836,667	+		AO353_08355	0.13	-0.3
1,836,667	+		AO353_08355	0.13	-1.7
1,836,667	+		AO353_08355	0.13	-1.3
1,836,668	-		AO353_08355	0.13	-1.4
1,836,668	-		AO353_08355	0.13	-0.2
1,836,668	-		AO353_08355	0.13	-1.0
1,836,668	-		AO353_08355	0.13	-0.4
1,836,668	-		AO353_08355	0.13	-1.3
1,836,668	-		AO353_08355	0.13	-0.4
1,836,670	+		AO353_08355	0.13	-0.4
1,836,670	+		AO353_08355	0.13	-1.1
1,836,670	+		AO353_08355	0.13	-0.6
1,836,670	+		AO353_08355	0.13	-1.6
1,836,671	-		AO353_08355	0.13	+0.0
1,836,671	-		AO353_08355	0.13	-0.8
1,836,671	-		AO353_08355	0.13	+0.1
1,836,671	-		AO353_08355	0.13	+0.4
1,836,671	-		AO353_08355	0.13	+1.7
1,836,671	-		AO353_08355	0.13	-2.5
1,836,691	+		AO353_08355	0.15	+0.0
1,836,730	+		AO353_08355	0.18	-0.6
1,836,751	+		AO353_08355	0.20	-2.6
1,836,751	+		AO353_08355	0.20	+0.7
1,836,751	+		AO353_08355	0.20	+1.0
1,836,752	-		AO353_08355	0.20	+0.7
1,836,752	-		AO353_08355	0.20	-0.8
1,836,752	-		AO353_08355	0.20	+0.4
1,836,766	+		AO353_08355	0.22	+0.2
1,836,766	+		AO353_08355	0.22	+0.8
1,836,767	-		AO353_08355	0.22	+0.0
1,836,828	+		AO353_08355	0.27	-1.0
1,836,828	+		AO353_08355	0.27	-1.0
1,836,828	+		AO353_08355	0.27	-1.1
1,836,829	-		AO353_08355	0.27	+0.0
1,836,829	-		AO353_08355	0.27	+0.8
1,836,829	-		AO353_08355	0.27	+0.8
1,836,878	-		AO353_08355	0.32	+0.1
1,836,878	-		AO353_08355	0.32	-0.1
1,836,878	-		AO353_08355	0.32	-1.0
1,837,042	+		AO353_08355	0.47	+1.1
1,837,042	+		AO353_08355	0.47	-0.2
1,837,090	+		AO353_08355	0.51	-0.4
1,837,090	+		AO353_08355	0.51	-0.5
1,837,267	-		AO353_08355	0.67	-2.3
1,837,335	+		AO353_08355	0.73	+1.4
1,837,335	+		AO353_08355	0.73	+1.7
1,837,335	+		AO353_08355	0.73	-0.9
1,837,335	+		AO353_08355	0.73	+1.4
1,837,335	+		AO353_08355	0.73	+0.0
1,837,335	+		AO353_08355	0.73	+0.0
1,837,336	-		AO353_08355	0.73	+0.8
1,837,336	-		AO353_08355	0.73	+1.4
1,837,336	-		AO353_08355	0.73	-1.9
1,837,336	-		AO353_08355	0.73	-0.8
1,837,336	-		AO353_08355	0.73	+2.7
1,837,336	-		AO353_08355	0.73	+0.9
1,837,492	+		AO353_08355	0.88	-0.6
1,837,492	+		AO353_08355	0.88	-0.3
1,837,493	-		AO353_08355	0.88	-0.1
1,837,493	-		AO353_08355	0.88	-1.7
1,837,493	-		AO353_08355	0.88	-0.0
1,837,493	-		AO353_08355	0.88	-2.2
1,837,493	-		AO353_08355	0.88	-1.3
1,837,507	+		AO353_08355	0.89	+1.9
1,837,508	-		AO353_08355	0.89	+0.4
1,837,508	-		AO353_08355	0.89	+1.6
1,837,567	+				-2.1
1,837,567	+				-1.5
1,837,567	+				-0.1
1,837,567	+				-0.4
1,837,567	+				-0.2
1,837,568	-				+0.1
1,837,568	-				-1.3
1,837,568	-				-3.0
1,837,568	-				+1.6
1,837,568	-				-1.8
1,837,568	-				+0.4
1,837,568	-				+0.8
1,837,568	-				+0.4
1,837,568	-				+0.5
1,837,568	-				-0.6
1,837,568	-				-0.7
1,837,568	-				-1.5
1,837,568	-				+0.0
1,837,568	-				-1.6
1,837,628	+				-2.8
1,837,628	+				-1.8
1,837,628	+				-1.7
1,837,628	+				-2.3
1,837,628	+				-1.0
1,837,628	+				-0.1
1,837,628	+				-0.3
1,837,628	+				+0.0
1,837,629	-				-0.2
1,837,629	-				-0.6
1,837,629	-				-0.2
1,837,629	-				-0.8
1,837,629	-				+0.4
1,837,629	-				-0.2
1,837,629	-				-2.4
1,837,629	-				-1.1
1,837,629	-				+1.2
1,837,629	-				-1.0
1,837,629	-				+1.4
1,837,629	-				+0.4
1,837,632	+				+1.4
1,837,632	+				-1.3
1,837,632	+				+0.3
1,837,632	+				-0.0
1,837,632	+				-0.1
1,837,633	-				+0.7
1,837,633	-				-1.4
1,837,633	-				-1.2
1,837,633	-				-0.3
1,837,633	-				-1.0
1,837,633	-				+0.3
1,837,633	-				+0.4
1,837,633	-				+1.3
1,837,633	-				+0.0
1,837,665	+				-2.4
1,837,666	-				+1.4
1,837,677	+				+0.4
1,837,677	+				-1.0
1,837,678	-				-1.1
1,837,678	-				+2.7
1,837,701	-				-0.6
1,837,701	-				-1.3
1,837,766	+		AO353_08360	0.11	+1.3
1,837,766	+		AO353_08360	0.11	+1.1
1,837,767	-		AO353_08360	0.11	-0.9
1,837,767	-		AO353_08360	0.11	-1.3
1,837,767	-		AO353_08360	0.11	-0.2
1,837,767	-		AO353_08360	0.11	-1.1
1,837,910	+		AO353_08360	0.21	+0.0
1,837,910	+		AO353_08360	0.21	-0.0
1,837,910	+		AO353_08360	0.21	+0.1
1,837,910	+		AO353_08360	0.21	-0.6
1,837,910	+		AO353_08360	0.21	-0.6
1,837,910	+		AO353_08360	0.21	-2.0
1,837,910	+		AO353_08360	0.21	+0.2
1,837,910	+		AO353_08360	0.21	+0.2
1,837,910	+		AO353_08360	0.21	-1.1
1,837,910	+		AO353_08360	0.21	-1.3
1,837,910	+		AO353_08360	0.21	+0.0
1,837,910	+		AO353_08360	0.21	-1.1
1,837,911	-		AO353_08360	0.21	+0.0
1,837,911	-		AO353_08360	0.21	-2.0
1,837,911	-		AO353_08360	0.21	-0.8
1,837,911	-		AO353_08360	0.21	-0.8
1,837,911	-		AO353_08360	0.21	-0.9
1,837,911	-		AO353_08360	0.21	-1.3
1,837,911	-		AO353_08360	0.21	-1.3
1,837,911	-		AO353_08360	0.21	-0.5
1,837,911	-		AO353_08360	0.21	-0.4
1,837,991	+		AO353_08360	0.27	+0.6
1,837,991	+		AO353_08360	0.27	+0.5
1,837,991	+		AO353_08360	0.27	+0.6
1,837,992	-		AO353_08360	0.27	-0.2
1,837,992	-		AO353_08360	0.27	+1.7
1,837,992	-		AO353_08360	0.27	+0.0
1,838,135	+		AO353_08360	0.37	-1.3
1,838,135	+		AO353_08360	0.37	-0.4
1,838,135	+		AO353_08360	0.37	+0.7
1,838,135	+		AO353_08360	0.37	-1.8
1,838,135	+		AO353_08360	0.37	-0.8
1,838,135	+		AO353_08360	0.37	+2.2
1,838,135	+		AO353_08360	0.37	-1.1
1,838,136	-		AO353_08360	0.37	-0.6
1,838,136	-		AO353_08360	0.37	-2.2
1,838,136	-		AO353_08360	0.37	-1.7
1,838,136	-		AO353_08360	0.37	+2.7
1,838,136	-		AO353_08360	0.37	-2.2
1,838,136	-		AO353_08360	0.37	-1.0
1,838,136	-		AO353_08360	0.37	-0.2
1,838,136	-		AO353_08360	0.37	-2.4
1,838,136	-		AO353_08360	0.37	+0.4
1,838,136	-		AO353_08360	0.37	-1.2
1,838,136	-		AO353_08360	0.37	-1.3
1,838,136	-		AO353_08360	0.37	+0.8
1,838,136	-		AO353_08360	0.37	+0.4
1,838,136	-		AO353_08360	0.37	-0.6
1,838,136	-		AO353_08360	0.37	-1.2
1,838,136	-		AO353_08360	0.37	-0.8
1,838,136	-		AO353_08360	0.37	-2.3
1,838,136	-		AO353_08360	0.37	-0.3
1,838,136	-		AO353_08360	0.37	-1.5
1,838,141	+		AO353_08360	0.37	-0.1
1,838,141	+		AO353_08360	0.37	-1.2
1,838,141	+		AO353_08360	0.37	-0.8
1,838,141	+		AO353_08360	0.37	+0.2
1,838,141	+		AO353_08360	0.37	-1.2
1,838,141	+		AO353_08360	0.37	-1.6
1,838,142	-		AO353_08360	0.37	-1.1
1,838,142	-		AO353_08360	0.37	-2.4
1,838,142	-		AO353_08360	0.37	-1.7
1,838,142	-		AO353_08360	0.37	+0.8
1,838,142	-		AO353_08360	0.37	-1.0
1,838,142	-		AO353_08360	0.37	+1.8
1,838,142	-		AO353_08360	0.37	+0.9
1,838,142	-		AO353_08360	0.37	+0.0
1,838,142	-		AO353_08360	0.37	-0.2
1,838,152	-		AO353_08360	0.38	+0.2
1,838,199	+		AO353_08360	0.41	-0.5
1,838,199	+		AO353_08360	0.41	-1.1
1,838,199	+		AO353_08360	0.41	+0.0
1,838,199	+		AO353_08360	0.41	+0.3
1,838,200	-		AO353_08360	0.41	+0.1
1,838,210	+		AO353_08360	0.42	+1.9
1,838,211	-		AO353_08360	0.42	+0.6
1,838,280	-		AO353_08360	0.47	-0.1
1,838,297	+		AO353_08360	0.48	-0.1
1,838,297	+		AO353_08360	0.48	+0.5
1,838,298	-		AO353_08360	0.48	-1.3
1,838,298	-		AO353_08360	0.48	+0.8
1,838,298	-		AO353_08360	0.48	-2.8
1,838,318	+		AO353_08360	0.50	-0.8
1,838,319	-		AO353_08360	0.50	-1.6
1,838,555	+		AO353_08360	0.67	-0.2
1,838,555	+		AO353_08360	0.67	+0.0
1,838,555	+		AO353_08360	0.67	+1.7
1,838,555	+		AO353_08360	0.67	-0.1
1,838,555	+		AO353_08360	0.67	-1.0
1,838,555	+		AO353_08360	0.67	-1.1
1,838,556	-		AO353_08360	0.67	-0.4
1,838,556	-		AO353_08360	0.67	+0.0
1,838,587	+		AO353_08360	0.69	-1.6
1,838,588	-		AO353_08360	0.69	+0.2
1,838,615	+		AO353_08360	0.71	-1.5
1,838,615	+		AO353_08360	0.71	-0.5
1,838,615	+		AO353_08360	0.71	-0.8
1,838,615	+		AO353_08360	0.71	+0.5
1,838,615	+		AO353_08360	0.71	-0.4
1,838,615	+		AO353_08360	0.71	-0.1
1,838,616	-		AO353_08360	0.71	+0.5
1,838,616	-		AO353_08360	0.71	+1.4
1,838,616	-		AO353_08360	0.71	+0.0
1,838,616	-		AO353_08360	0.71	-0.9
1,838,616	-		AO353_08360	0.71	+1.2
1,838,616	-		AO353_08360	0.71	-0.2