Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08070

Experiment: Tetracycline 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0016 mg/ml
1,777,784	+		AO353_08065	0.29	-1.5
1,777,842	+		AO353_08065	0.34	-0.4
1,777,842	+		AO353_08065	0.34	+0.3
1,777,842	+		AO353_08065	0.34	+0.2
1,777,842	+		AO353_08065	0.34	-1.0
1,777,842	+		AO353_08065	0.34	-1.5
1,777,843	-		AO353_08065	0.34	-0.4
1,777,843	-		AO353_08065	0.34	-0.5
1,777,843	-		AO353_08065	0.34	-0.5
1,777,843	-		AO353_08065	0.34	-0.8
1,777,843	-		AO353_08065	0.34	-0.0
1,777,843	-		AO353_08065	0.34	-2.2
1,777,844	+		AO353_08065	0.34	-0.5
1,777,860	-		AO353_08065	0.35	+2.3
1,777,967	-		AO353_08065	0.44	+0.8
1,778,023	+		AO353_08065	0.49	-0.2
1,778,024	-		AO353_08065	0.49	+0.7
1,778,098	-		AO353_08065	0.55	+0.9
1,778,099	+		AO353_08065	0.55	-0.1
1,778,099	+		AO353_08065	0.55	+0.9
1,778,099	+		AO353_08065	0.55	-1.0
1,778,099	+		AO353_08065	0.55	-1.3
1,778,099	+		AO353_08065	0.55	+0.4
1,778,099	+		AO353_08065	0.55	-0.4
1,778,099	+		AO353_08065	0.55	+0.3
1,778,100	-		AO353_08065	0.55	+0.2
1,778,100	-		AO353_08065	0.55	+0.7
1,778,100	-		AO353_08065	0.55	-0.5
1,778,100	-		AO353_08065	0.55	-0.8
1,778,100	-		AO353_08065	0.55	-0.6
1,778,100	-		AO353_08065	0.55	+3.6
1,778,318	-		AO353_08065	0.72	+0.4
1,778,329	+		AO353_08065	0.73	-0.9
1,778,330	-		AO353_08065	0.73	+1.2
1,778,330	-		AO353_08065	0.73	-0.3
1,778,330	-		AO353_08065	0.73	+0.2
1,778,330	-		AO353_08065	0.73	-0.3
1,778,421	+		AO353_08065	0.81	+0.3
1,778,421	+		AO353_08065	0.81	-1.4
1,778,422	-		AO353_08065	0.81	+1.7
1,778,422	-		AO353_08065	0.81	-2.1
1,778,422	-		AO353_08065	0.81	+0.5
1,778,504	+		AO353_08065	0.87	-0.1
1,778,504	+		AO353_08065	0.87	-0.3
1,778,504	+		AO353_08065	0.87	+1.9
1,778,504	+		AO353_08065	0.87	+1.2
1,778,505	-		AO353_08065	0.87	+1.3
1,778,505	-		AO353_08065	0.87	+0.6
1,778,505	-		AO353_08065	0.87	-0.7
1,778,505	-		AO353_08065	0.87	-0.4
1,778,515	+		AO353_08065	0.88	-0.3
1,778,515	+		AO353_08065	0.88	-0.0
1,778,515	+		AO353_08065	0.88	-1.0
1,778,515	+		AO353_08065	0.88	-0.3
1,778,515	+		AO353_08065	0.88	+1.1
1,778,515	+		AO353_08065	0.88	-1.3
1,778,515	+		AO353_08065	0.88	+0.5
1,778,515	+		AO353_08065	0.88	+0.9
1,778,515	+		AO353_08065	0.88	+0.3
1,778,515	+		AO353_08065	0.88	+0.5
1,778,516	-		AO353_08065	0.88	+0.2
1,778,516	-		AO353_08065	0.88	-0.8
1,778,606	+				-1.6
1,778,607	-				-0.5
1,778,607	-				-0.8
1,778,729	+				-1.4
1,778,730	-				-1.2
1,778,730	-				-0.8
1,778,730	-				+0.3
1,778,746	+				+1.2
1,778,839	+				+0.8
1,778,839	+				-0.2
1,778,839	+				+0.6
1,778,839	+				+2.3
1,778,839	+				-0.1
1,778,839	+				+0.8
1,778,840	-				-1.2
1,778,928	-		AO353_08070	0.17	-1.6
1,778,928	-		AO353_08070	0.17	+0.9
1,779,001	+		AO353_08070	0.25	+0.4
1,779,002	-		AO353_08070	0.26	-0.3
1,779,266	-		AO353_08070	0.54	-0.4
1,779,266	-		AO353_08070	0.54	+0.6
1,779,393	+		AO353_08070	0.68	-1.1
1,779,394	-		AO353_08070	0.69	+0.3
1,779,394	-		AO353_08070	0.69	-1.8
1,779,394	-		AO353_08070	0.69	+0.2
1,779,444	+		AO353_08070	0.74	+0.5
1,779,444	+		AO353_08070	0.74	-0.4
1,779,444	+		AO353_08070	0.74	+0.2
1,779,444	+		AO353_08070	0.74	-1.5
1,779,444	+		AO353_08070	0.74	+0.2
1,779,444	+		AO353_08070	0.74	-0.8
1,779,444	+		AO353_08070	0.74	-0.7
1,779,445	-		AO353_08070	0.74	-0.5
1,779,445	-		AO353_08070	0.74	-1.9
1,779,445	-		AO353_08070	0.74	+0.5
1,779,445	-		AO353_08070	0.74	-2.1
1,779,445	-		AO353_08070	0.74	-1.9
1,779,445	-		AO353_08070	0.74	-0.5
1,779,445	-		AO353_08070	0.74	-1.2
1,779,445	-		AO353_08070	0.74	-1.0
1,779,445	-		AO353_08070	0.74	-0.2
1,779,531	-		AO353_08070	0.84	+1.8
1,779,573	+		AO353_08070	0.88	-0.8
1,779,574	-		AO353_08070	0.88	+0.8
1,779,574	-		AO353_08070	0.88	-0.5
1,779,574	-		AO353_08070	0.88	-1.6
1,779,574	-		AO353_08070	0.88	-0.3
1,779,692	+				+0.5
1,779,693	-				-1.0
1,779,693	-				+0.9
1,779,693	-				+1.2
1,779,693	-				-0.5
1,779,719	+				+0.1
1,779,719	+				-0.2
1,779,719	+				+1.2
1,779,719	+				-0.0
1,779,719	+				+1.0
1,779,719	+				+0.3
1,779,719	+				-0.8
1,779,720	-				-0.4
1,779,720	-				-1.1
1,779,720	-				-0.6
1,779,720	-				+0.2
1,779,720	-				+1.3
1,779,720	-				-1.7
1,779,720	-				+0.0
1,779,720	-				-1.0
1,779,720	-				+0.5
1,779,720	-				+1.3
1,779,781	+				+1.7
1,779,781	+				+0.3
1,779,781	+				-0.2
1,779,782	-				-1.3
1,779,782	-				+1.1
1,779,782	-				-0.9
1,779,782	-				+0.3
1,779,782	-				+1.2
1,779,782	-				-0.5
1,779,782	-				+0.6
1,779,881	+		AO353_08075	0.18	-2.4
1,779,881	+		AO353_08075	0.18	+1.3
1,779,881	+		AO353_08075	0.18	+0.8
1,779,882	-		AO353_08075	0.18	+0.5
1,779,895	+		AO353_08075	0.20	+0.6
1,779,895	+		AO353_08075	0.20	-0.5
1,779,895	+		AO353_08075	0.20	-2.2
1,779,895	+		AO353_08075	0.20	-0.1
1,779,895	+		AO353_08075	0.20	-0.2
1,779,895	+		AO353_08075	0.20	-0.5
1,779,895	+		AO353_08075	0.20	-2.4
1,779,895	+		AO353_08075	0.20	+0.7
1,779,896	-		AO353_08075	0.20	-0.5
1,779,896	-		AO353_08075	0.20	-0.5
1,779,994	+		AO353_08075	0.36	-0.7
1,779,994	+		AO353_08075	0.36	+0.9
1,779,995	-		AO353_08075	0.36	+3.5
1,779,995	-		AO353_08075	0.36	+0.5
1,779,995	-		AO353_08075	0.36	-0.5
1,779,995	-		AO353_08075	0.36	-1.2
1,780,132	+		AO353_08075	0.58	-0.8
1,780,132	+		AO353_08075	0.58	+2.9
1,780,133	-		AO353_08075	0.59	+1.8
1,780,133	-		AO353_08075	0.59	+1.3
1,780,133	-		AO353_08075	0.59	-0.2
1,780,133	-		AO353_08075	0.59	+1.3
1,780,153	+		AO353_08075	0.62	-0.2
1,780,153	+		AO353_08075	0.62	-0.9
1,780,153	+		AO353_08075	0.62	+1.0
1,780,154	-		AO353_08075	0.62	+1.2
1,780,154	-		AO353_08075	0.62	+1.1
1,780,154	-		AO353_08075	0.62	-0.7
1,780,154	-		AO353_08075	0.62	-0.8
1,780,154	-		AO353_08075	0.62	+0.1
1,780,213	+		AO353_08075	0.72	+1.1
1,780,213	+		AO353_08075	0.72	+1.1
1,780,214	-		AO353_08075	0.72	+1.8
1,780,214	-		AO353_08075	0.72	+0.8
1,780,231	+		AO353_08075	0.74	+1.3
1,780,231	+		AO353_08075	0.74	+1.7
1,780,231	+		AO353_08075	0.74	+0.3
1,780,232	-		AO353_08075	0.75	+0.7
1,780,232	-		AO353_08075	0.75	-1.0
1,780,232	-		AO353_08075	0.75	+0.5
1,780,232	-		AO353_08075	0.75	+0.5
1,780,232	-		AO353_08075	0.75	+1.6
1,780,232	-		AO353_08075	0.75	-1.0
1,780,232	-		AO353_08075	0.75	-0.8
1,780,232	-		AO353_08075	0.75	-1.6
1,780,247	+		AO353_08075	0.77	+0.3
1,780,247	+		AO353_08075	0.77	+0.6
1,780,248	-		AO353_08075	0.77	+0.9
1,780,256	-		AO353_08075	0.78	+0.8
1,780,384	+				+1.2
1,780,384	+				-2.3
1,780,384	+				+0.3
1,780,384	+				+0.2
1,780,384	+				-0.6
1,780,384	+				+1.3
1,780,384	+				-0.3
1,780,384	+				-0.7
1,780,384	+				+0.8
1,780,384	+				+0.1
1,780,384	+				+0.9
1,780,385	-				+0.8
1,780,385	-				+0.9
1,780,385	-				-0.8
1,780,385	-				-1.0
1,780,385	-				-2.6
1,780,385	-				+1.5
1,780,385	-				-0.4
1,780,385	-				-0.0
1,780,385	-				+0.3
1,780,385	-				+1.1
1,780,416	+				-0.3
1,780,416	+				-0.7
1,780,416	+				-0.5
1,780,416	+				+0.2
1,780,416	+				-0.4
1,780,416	+				-1.6
1,780,416	+				+0.9
1,780,416	+				+2.6
1,780,417	-				-1.2
1,780,417	-				-0.3
1,780,417	-				+1.3
1,780,417	-				+0.0
1,780,417	-				-0.8
1,780,417	-				-1.0
1,780,417	-				-0.5
1,780,417	-				-1.2
1,780,440	+				-1.3
1,780,441	-				-0.4
1,780,441	-				-1.2
1,780,480	+				-1.2
1,780,480	+				-0.3
1,780,503	+				-2.1
1,780,503	+				+1.0
1,780,504	-				+2.3
1,780,504	-				+0.9
1,780,504	-				+1.8
1,780,504	-				-0.1
1,780,655	+		AO353_08080	0.27	+2.3
1,780,655	+		AO353_08080	0.27	+0.3
1,780,655	+		AO353_08080	0.27	-0.5
1,780,655	+		AO353_08080	0.27	+0.1
1,780,655	+		AO353_08080	0.27	-1.2
1,780,655	+		AO353_08080	0.27	+1.8
1,780,655	+		AO353_08080	0.27	-1.4
1,780,656	-		AO353_08080	0.27	-1.2
1,780,656	-		AO353_08080	0.27	-0.2
1,780,656	-		AO353_08080	0.27	+1.3
1,780,656	-		AO353_08080	0.27	-1.0
1,780,656	-		AO353_08080	0.27	+0.3
1,780,656	-		AO353_08080	0.27	-1.4
1,780,656	-		AO353_08080	0.27	+0.5
1,780,656	-		AO353_08080	0.27	-2.0
1,780,656	-		AO353_08080	0.27	+0.3
1,780,679	+		AO353_08080	0.32	+1.2
1,780,679	+		AO353_08080	0.32	-0.2
1,780,679	+		AO353_08080	0.32	-0.9
1,780,679	+		AO353_08080	0.32	+1.1
1,780,679	+		AO353_08080	0.32	+2.0
1,780,679	+		AO353_08080	0.32	-0.9
1,780,680	-		AO353_08080	0.32	+0.0
1,780,680	-		AO353_08080	0.32	+0.3
1,780,680	-		AO353_08080	0.32	+0.2
1,780,680	-		AO353_08080	0.32	+0.1
1,780,680	-		AO353_08080	0.32	-0.6
1,780,680	-		AO353_08080	0.32	+0.0