Strain Fitness in Shewanella loihica PV-4 around Shew_3681

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
4,383,062	+		Shew_3679	0.77	+0.4
4,383,154	-				-0.3
4,383,336	-				+0.8
4,383,368	+		Shew_3680	0.15	+0.2
4,383,499	-		Shew_3680	0.44	+0.4
4,383,530	+		Shew_3680	0.50	-0.8
4,383,679	+		Shew_3680	0.82	+1.0
4,383,857	-				-0.1
4,383,993	-				+0.1
4,384,061	+				+0.7
4,384,114	+				+0.8
4,384,164	-				+1.3
4,384,278	+		Shew_3681	0.12	+1.3
4,384,310	-		Shew_3681	0.13	+1.4
4,384,803	+		Shew_3681	0.36	+1.6
4,384,818	+		Shew_3681	0.37	+1.5
4,384,818	+		Shew_3681	0.37	+1.6
4,384,818	+		Shew_3681	0.37	+1.9
4,384,872	+		Shew_3681	0.40	+1.5
4,385,118	-		Shew_3681	0.51	+1.3
4,385,125	-		Shew_3681	0.51	+2.1
4,385,142	-		Shew_3681	0.52	+1.8
4,385,346	-		Shew_3681	0.62	+2.0
4,385,441	+		Shew_3681	0.66	+1.9
4,385,441	+		Shew_3681	0.66	+2.1
4,385,467	-		Shew_3681	0.67	+1.9
4,385,640	-		Shew_3681	0.76	+1.8
4,385,762	+		Shew_3681	0.81	+1.8
4,386,090	-				+1.7
4,386,234	+				+1.4
4,386,242	-				+2.0
4,386,242	-				+2.6
4,386,297	-				+1.9
4,386,367	-		Shew_3682	0.14	+1.9
4,386,400	-		Shew_3682	0.16	+1.5
4,386,417	+		Shew_3682	0.18	+1.8
4,386,417	+		Shew_3682	0.18	+2.2
4,386,626	+		Shew_3682	0.32	+2.2
4,386,626	+		Shew_3682	0.32	+2.2
4,386,667	-		Shew_3682	0.35	+2.2
4,386,749	-		Shew_3682	0.41	+1.9
4,386,754	-		Shew_3682	0.41	+1.6
4,386,930	+		Shew_3682	0.53	+1.8
4,386,979	-		Shew_3682	0.57	+1.5