Strain Fitness in Shewanella loihica PV-4 around Shew_3622

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
4,318,634	-		Shew_3620	0.72	-1.0
4,318,917	-				+0.1
4,318,924	-				-0.7
4,318,954	+				+1.6
4,318,983	+				-0.2
4,319,046	-				+0.6
4,319,047	+				+0.2
4,319,140	-				+0.6
4,319,218	-		Shew_3621	0.16	-0.8
4,319,305	-		Shew_3621	0.38	+0.2
4,319,661	+	hslO	Shew_3622	0.12	+0.1
4,319,661	+	hslO	Shew_3622	0.12	+0.1
4,319,669	-	hslO	Shew_3622	0.13	+0.4
4,319,669	-	hslO	Shew_3622	0.13	+0.8
4,320,014	-	hslO	Shew_3622	0.53	+1.9
4,320,087	-	hslO	Shew_3622	0.61	+1.2
4,320,174	-	hslO	Shew_3622	0.71	+0.4
4,320,320	-	hslO	Shew_3622	0.88	+1.6