Strain Fitness in Shewanella loihica PV-4 around Shew_3341

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
3,984,940	+		Shew_3340	0.64	+0.0
3,984,951	+		Shew_3340	0.65	-1.1
3,985,440	-		Shew_3340	0.89	+0.2
3,985,488	+				+0.1
3,985,488	+				+0.0
3,985,693	+				-0.1
3,985,778	+				-1.6
3,985,788	-				-0.2
3,985,887	+		Shew_3341	0.14	+0.2
3,986,541	+		Shew_3341	0.81	+2.4
3,986,588	+		Shew_3341	0.86	+0.2
3,986,711	-				-0.1
3,986,836	-				+0.8
3,986,836	-				-0.7
3,986,949	-				+0.1
3,987,043	+		Shew_3342	0.21	+0.1
3,987,352	-		Shew_3342	0.79	-0.8
3,987,523	-				+0.1