Strain Fitness in Shewanella loihica PV-4 around Shew_2978

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
3,531,762	-		Shew_2977	0.56	-0.8
3,531,762	-		Shew_2977	0.56	+0.6
3,531,789	-		Shew_2977	0.58	-0.6
3,531,794	-		Shew_2977	0.58	-0.7
3,531,940	-		Shew_2977	0.65	+0.2
3,532,105	+		Shew_2977	0.74	+0.7
3,532,181	+		Shew_2977	0.78	+0.0
3,532,182	+		Shew_2977	0.78	+0.2
3,532,425	+				-0.6
3,532,498	+				+0.2
3,532,809	+		Shew_2978	0.17	+1.5
3,533,218	+		Shew_2978	0.72	+0.4
3,533,257	-		Shew_2978	0.77	+0.1
3,533,436	+				-0.3
3,533,441	+				-1.5
3,533,466	+				+0.1
3,533,555	+				+0.0
3,533,623	-				-1.0
3,533,830	+				-0.2
3,533,936	+				-1.0
3,533,944	-				+0.5
3,533,944	-				-0.2
3,534,103	-		Shew_2979	0.21	+0.7