Strain Fitness in Shewanella loihica PV-4 around Shew_2667

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
3,149,446	+		Shew_2666	0.64	+1.5
3,149,458	+		Shew_2666	0.64	+1.0
3,149,717	-		Shew_2666	0.76	+1.6
3,150,078	-				+1.4
3,150,309	+				+1.6
3,150,317	-				+1.9
3,150,440	-				+2.6
3,150,595	+				+1.3
3,150,595	+				+1.6
3,150,605	+				+1.0
3,150,782	+				+1.7
3,150,846	-		Shew_2667	0.11	+1.7
3,151,313	+		Shew_2667	0.19	+0.9
3,151,313	+		Shew_2667	0.19	+1.2
3,151,815	-		Shew_2667	0.28	+1.7
3,151,827	+		Shew_2667	0.28	+1.3
3,151,885	+		Shew_2667	0.29	+1.8
3,152,205	-		Shew_2667	0.34	+0.8
3,152,205	-		Shew_2667	0.34	+0.7
3,152,320	+		Shew_2667	0.36	+1.3
3,153,556	+		Shew_2667	0.58	+1.6
3,153,559	-		Shew_2667	0.58	+1.6
3,153,671	-		Shew_2667	0.60	+1.6
3,153,690	-		Shew_2667	0.60	+1.6
3,153,712	-		Shew_2667	0.60	+1.7
3,154,713	+		Shew_2667	0.78	+2.1
3,154,713	+		Shew_2667	0.78	+1.9
3,154,721	-		Shew_2667	0.78	+1.8
3,154,721	-		Shew_2667	0.78	+0.3
3,154,721	-		Shew_2667	0.78	+2.4
3,154,721	-		Shew_2667	0.78	+0.7
3,155,535	+				+1.8
3,155,651	-				+2.6
3,155,660	+				+1.6
3,155,660	+				+1.4
3,155,784	-				+0.2
3,156,029	-				+1.1
3,156,089	-				+1.3
3,156,089	-				+1.2
3,156,355	-		Shew_2668	0.13	+1.7
3,156,384	-		Shew_2668	0.15	+2.3
3,156,575	+		Shew_2668	0.26	+2.5
3,156,575	+		Shew_2668	0.26	+1.6
3,156,673	+		Shew_2668	0.32	+0.9