Strain Fitness in Shewanella loihica PV-4 around Shew_2567

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
3,023,429	+		Shew_2565	0.22	+0.4
3,023,439	+		Shew_2565	0.25	+0.6
3,023,447	-		Shew_2565	0.29	+0.1
3,023,608	-				+0.5
3,023,608	-				+0.2
3,023,610	+				-0.1
3,023,618	-				+0.6
3,023,688	+				+0.0
3,023,803	-				+0.2
3,023,803	-				+0.1
3,023,898	+		Shew_2566	0.28	+0.5
3,023,906	-		Shew_2566	0.30	+0.4
3,024,038	+		Shew_2566	0.57	+0.1
3,024,281	-				-0.1
3,024,370	+				-0.2
3,024,479	+		Shew_2567	0.21	-0.9
3,024,937	-		Shew_2567	0.67	-1.5
3,024,952	+		Shew_2567	0.69	-0.1
3,025,491	+				-0.1
3,025,642	+				+0.0
3,025,668	-				-1.3
3,025,674	+				+0.1
3,025,682	-				+0.1
3,025,682	-				-0.6
3,025,682	-				-0.5
3,025,729	+				+0.9
3,025,784	-				+0.3
3,025,943	-		Shew_2568	0.15	+0.2