Strain Fitness in Shewanella loihica PV-4 around Shew_2425

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,848,360	-		Shew_2422	0.73	+0.3
2,848,621	-		Shew_2423	0.58	+0.1
2,848,819	-				+0.4
2,848,855	+				+0.4
2,848,954	-				-0.5
2,850,004	-	fadJ	Shew_2425	0.32	+0.5
2,850,300	+	fadJ	Shew_2425	0.46	+0.8
2,850,402	-	fadJ	Shew_2425	0.51	+0.1
2,850,414	-	fadJ	Shew_2425	0.51	+0.3
2,850,495	-	fadJ	Shew_2425	0.55	+0.7
2,850,597	-	fadJ	Shew_2425	0.60	+0.2
2,850,790	-	fadJ	Shew_2425	0.69	+2.0
2,851,278	-				+1.1
2,851,587	-	fadI	Shew_2426	0.10	-0.6
2,851,723	-	fadI	Shew_2426	0.21	+0.3
2,851,982	+	fadI	Shew_2426	0.40	+1.2