Strain Fitness in Shewanella loihica PV-4 around Shew_1865

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
2,142,647	-				+0.5
2,142,896	+		Shew_1864	0.50	-0.7
2,143,003	-		Shew_1864	0.71	-1.0
2,143,069	+		Shew_1864	0.84	+0.3
2,143,820	-		Shew_1865	0.35	+2.3
2,143,822	+		Shew_1865	0.35	+1.3
2,143,895	+		Shew_1865	0.40	+0.9
2,144,053	-		Shew_1865	0.49	+0.8
2,144,293	+		Shew_1865	0.63	+1.0
2,144,483	-		Shew_1865	0.74	+0.9
2,145,145	+		Shew_1866	0.81	+0.4
2,145,418	+		Shew_1867	0.49	+1.6
2,145,546	+		Shew_1867	0.82	+1.1
2,145,685	+				+0.3
2,145,874	+				+0.8