Strain Fitness in Shewanella loihica PV-4 around Shew_1395

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,603,583	-		Shew_1394	0.76	-0.4
1,603,796	-		Shew_1394	0.86	+0.5
1,603,821	-		Shew_1394	0.87	+0.4
1,603,838	+		Shew_1394	0.88	-0.2
1,603,841	-		Shew_1394	0.88	+0.2
1,603,974	+				+0.1
1,604,210	-				-1.7
1,604,210	-				-0.7
1,604,378	+		Shew_1395	0.12	+0.1
1,604,428	+		Shew_1395	0.18	-0.7
1,604,428	+		Shew_1395	0.18	-1.0
1,604,581	-		Shew_1395	0.38	-1.1
1,604,617	+		Shew_1395	0.43	-0.5
1,605,217	-				+0.5
1,605,801	-		Shew_1396	0.55	+0.3