Strain Fitness in Shewanella loihica PV-4 around Shew_1330

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,540,392	-		Shew_1329	0.24	-0.3
1,540,401	+		Shew_1329	0.25	-0.1
1,540,507	+		Shew_1329	0.35	-0.2
1,540,570	-		Shew_1329	0.41	-0.5
1,540,735	-		Shew_1329	0.56	+0.3
1,540,735	-		Shew_1329	0.56	+0.8
1,540,781	-		Shew_1329	0.60	-1.3
1,540,967	+		Shew_1329	0.77	-1.4
1,541,154	+				+0.7
1,541,232	+				-0.7
1,541,418	+		Shew_1330	0.19	-1.1
1,541,726	+		Shew_1330	0.46	-0.5
1,542,049	+		Shew_1330	0.75	+0.2
1,542,563	+		Shew_1331	0.23	-0.1
1,542,853	+		Shew_1331	0.50	-0.9
1,542,863	-		Shew_1331	0.51	-0.4
1,542,877	+		Shew_1331	0.52	-0.5
1,542,878	+		Shew_1331	0.52	-0.4
1,542,906	-		Shew_1331	0.55	-1.1
1,542,920	-		Shew_1331	0.56	-0.8
1,542,951	+		Shew_1331	0.59	-0.6
1,542,959	-		Shew_1331	0.60	+0.3
1,543,006	+		Shew_1331	0.64	+0.1
1,543,140	-		Shew_1331	0.77	-0.1
1,543,231	+		Shew_1331	0.85	+0.8