Strain Fitness in Shewanella loihica PV-4 around Shew_1173

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,355,273	+		Shew_1172	0.43	-0.0
1,355,291	+		Shew_1172	0.44	+0.1
1,355,485	+		Shew_1172	0.56	-0.4
1,355,509	-		Shew_1172	0.57	-0.4
1,355,570	-		Shew_1172	0.61	+0.6
1,355,788	+		Shew_1172	0.74	+0.1
1,355,841	+		Shew_1172	0.77	-1.5
1,355,889	+		Shew_1172	0.80	+0.2
1,355,972	+		Shew_1172	0.85	-0.3
1,355,972	+		Shew_1172	0.85	-0.3
1,356,187	+				-0.2
1,356,210	-				+0.1
1,356,211	+				-0.6
1,356,220	-				-0.3
1,356,278	-				-0.0
1,356,294	-				+0.1
1,356,600	+		Shew_1173	0.72	-0.9
1,356,608	-		Shew_1173	0.73	-0.8
1,356,629	+		Shew_1173	0.78	-0.7
1,356,756	+				-0.7
1,356,927	-				+1.2
1,357,096	+		Shew_1174	0.11	+0.0