Strain Fitness in Shewanella loihica PV-4 around Shew_0889

Experiment: Doxycycline hyclate 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 10 mg/ml
1,009,014	+		Shew_0888	0.58	+1.1
1,009,064	+		Shew_0888	0.62	+0.1
1,009,158	+		Shew_0888	0.70	-0.5
1,009,619	-				+0.2
1,009,935	-		Shew_0889	0.42	+0.3
1,010,060	+		Shew_0889	0.74	+1.1
1,010,505	+		Shew_0890	0.30	+1.0
1,010,512	-		Shew_0890	0.31	+0.6
1,010,547	+		Shew_0890	0.34	-0.2
1,010,550	-		Shew_0890	0.34	+0.3
1,010,884	-		Shew_0890	0.63	+0.4
1,011,123	+		Shew_0890	0.84	+0.5