Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4233

Experiment: Choline Lysine 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 20 mM
4,922,186	-				+0.7
4,922,186	-				-0.9
4,922,335	+		Pf6N2E2_4232	0.23	-0.2
4,922,336	-		Pf6N2E2_4232	0.23	+0.6
4,922,336	-		Pf6N2E2_4232	0.23	-0.5
4,922,362	+		Pf6N2E2_4232	0.25	-0.0
4,922,363	-		Pf6N2E2_4232	0.26	-0.1
4,922,363	-		Pf6N2E2_4232	0.26	+0.5
4,922,373	+		Pf6N2E2_4232	0.27	+0.6
4,922,440	+		Pf6N2E2_4232	0.33	-0.4
4,922,440	+		Pf6N2E2_4232	0.33	+0.6
4,922,440	+		Pf6N2E2_4232	0.33	+0.2
4,922,440	+		Pf6N2E2_4232	0.33	+0.4
4,922,440	+		Pf6N2E2_4232	0.33	+0.1
4,922,440	+		Pf6N2E2_4232	0.33	+1.6
4,922,440	+		Pf6N2E2_4232	0.33	-0.2
4,922,440	+		Pf6N2E2_4232	0.33	+0.8
4,922,441	-		Pf6N2E2_4232	0.33	-3.0
4,922,441	-		Pf6N2E2_4232	0.33	+1.2
4,922,441	-		Pf6N2E2_4232	0.33	+0.4
4,922,441	-		Pf6N2E2_4232	0.33	-0.4
4,922,484	+		Pf6N2E2_4232	0.38	+0.6
4,922,501	+		Pf6N2E2_4232	0.39	-0.2
4,922,551	+		Pf6N2E2_4232	0.45	-0.0
4,922,552	-		Pf6N2E2_4232	0.45	-0.6
4,922,623	+		Pf6N2E2_4232	0.52	+0.1
4,922,710	+		Pf6N2E2_4232	0.61	-0.1
4,922,711	-		Pf6N2E2_4232	0.61	-1.9
4,922,753	+		Pf6N2E2_4232	0.65	+0.4
4,922,753	+		Pf6N2E2_4232	0.65	+0.3
4,922,754	-		Pf6N2E2_4232	0.65	+0.3
4,922,882	+		Pf6N2E2_4232	0.78	+0.5
4,922,882	+		Pf6N2E2_4232	0.78	+0.1
4,922,882	+		Pf6N2E2_4232	0.78	+0.2
4,922,882	+		Pf6N2E2_4232	0.78	+0.1
4,922,882	+		Pf6N2E2_4232	0.78	-0.7
4,922,882	+		Pf6N2E2_4232	0.78	-0.1
4,922,882	+		Pf6N2E2_4232	0.78	+0.2
4,922,882	+		Pf6N2E2_4232	0.78	-0.0
4,922,882	+		Pf6N2E2_4232	0.78	+0.4
4,922,883	-		Pf6N2E2_4232	0.78	-0.1
4,922,883	-		Pf6N2E2_4232	0.78	-0.0
4,922,883	-		Pf6N2E2_4232	0.78	+0.1
4,922,883	-		Pf6N2E2_4232	0.78	-0.3
4,922,883	-		Pf6N2E2_4232	0.78	+0.5
4,922,883	-		Pf6N2E2_4232	0.78	-1.4
4,922,883	-		Pf6N2E2_4232	0.78	+0.5
4,922,883	-		Pf6N2E2_4232	0.78	+0.4
4,922,886	+		Pf6N2E2_4232	0.78	+0.9
4,922,886	+		Pf6N2E2_4232	0.78	-2.4
4,922,887	-		Pf6N2E2_4232	0.78	-1.8
4,922,956	+		Pf6N2E2_4232	0.85	-0.6
4,922,957	-		Pf6N2E2_4232	0.86	+0.5
4,922,957	-		Pf6N2E2_4232	0.86	+1.0
4,922,957	-		Pf6N2E2_4232	0.86	-2.2
4,922,990	-		Pf6N2E2_4232	0.89	+0.9
4,923,001	+				-0.2
4,923,001	+				+0.6
4,923,001	+				-1.0
4,923,002	-				-3.2
4,923,002	-				-1.1
4,923,002	-				+0.2
4,923,044	+				-0.0
4,923,044	+				+0.5
4,923,119	+				-0.2
4,923,119	+				-0.6
4,923,119	+				+0.3
4,923,120	-				-0.9
4,923,120	-				-0.6
4,923,120	-				+0.3
4,923,120	-				-0.3
4,923,195	+				+1.0
4,923,196	-				-0.9
4,923,196	-				-0.9
4,923,420	+		Pf6N2E2_4233	0.12	-1.0
4,923,420	+		Pf6N2E2_4233	0.12	+0.4
4,923,421	-		Pf6N2E2_4233	0.12	-0.9
4,923,421	-		Pf6N2E2_4233	0.12	-1.1
4,923,421	-		Pf6N2E2_4233	0.12	-0.5
4,923,421	-		Pf6N2E2_4233	0.12	-0.3
4,923,421	-		Pf6N2E2_4233	0.12	-1.6
4,923,421	-		Pf6N2E2_4233	0.12	-0.5
4,923,496	-		Pf6N2E2_4233	0.15	-1.3
4,923,496	-		Pf6N2E2_4233	0.15	-0.7
4,923,563	-		Pf6N2E2_4233	0.18	-1.3
4,923,576	+		Pf6N2E2_4233	0.19	-2.1
4,923,576	+		Pf6N2E2_4233	0.19	-1.1
4,923,577	-		Pf6N2E2_4233	0.19	-1.4
4,923,661	-		Pf6N2E2_4233	0.23	-0.8
4,923,661	-				+1.4
4,923,661	-		Pf6N2E2_4233	0.23	-3.2
4,923,672	+		Pf6N2E2_4233	0.23	-0.4
4,923,673	-		Pf6N2E2_4233	0.23	+2.2
4,923,673	-		Pf6N2E2_4233	0.23	-1.5
4,923,673	-		Pf6N2E2_4233	0.23	-0.3
4,923,708	+		Pf6N2E2_4233	0.25	-0.2
4,923,708	+		Pf6N2E2_4233	0.25	+0.1
4,923,709	-		Pf6N2E2_4233	0.25	-1.8
4,923,709	-		Pf6N2E2_4233	0.25	-1.3
4,923,709	-		Pf6N2E2_4233	0.25	-0.5
4,923,709	-		Pf6N2E2_4233	0.25	-3.6
4,923,709	-		Pf6N2E2_4233	0.25	-2.6
4,923,711	+		Pf6N2E2_4233	0.25	+0.2
4,923,748	+		Pf6N2E2_4233	0.26	-1.6
4,923,748	+		Pf6N2E2_4233	0.26	-2.2
4,923,748	+		Pf6N2E2_4233	0.26	-0.2
4,923,749	-		Pf6N2E2_4233	0.26	-1.8
4,923,749	-		Pf6N2E2_4233	0.26	-0.5
4,923,749	-		Pf6N2E2_4233	0.26	-2.3
4,923,856	+		Pf6N2E2_4233	0.31	-0.5
4,923,856	+		Pf6N2E2_4233	0.31	-1.4
4,923,857	-		Pf6N2E2_4233	0.31	-0.3
4,923,867	+		Pf6N2E2_4233	0.32	-1.6
4,923,867	+		Pf6N2E2_4233	0.32	-0.3
4,923,867	+		Pf6N2E2_4233	0.32	-1.1
4,923,867	+		Pf6N2E2_4233	0.32	-0.5
4,923,868	-		Pf6N2E2_4233	0.32	-1.5
4,923,903	+		Pf6N2E2_4233	0.33	-1.5
4,923,903	+		Pf6N2E2_4233	0.33	-1.8
4,924,086	+		Pf6N2E2_4233	0.41	-2.6
4,924,086	+		Pf6N2E2_4233	0.41	-2.4
4,924,087	-		Pf6N2E2_4233	0.41	-2.0
4,924,087	-		Pf6N2E2_4233	0.41	-1.6
4,924,087	-		Pf6N2E2_4233	0.41	-3.5
4,924,087	-		Pf6N2E2_4233	0.41	-1.4
4,924,091	+		Pf6N2E2_4233	0.42	-0.6
4,924,091	+		Pf6N2E2_4233	0.42	-0.2
4,924,092	-		Pf6N2E2_4233	0.42	-1.0
4,924,092	-		Pf6N2E2_4233	0.42	-0.7
4,924,116	+		Pf6N2E2_4233	0.43	-1.3
4,924,117	-		Pf6N2E2_4233	0.43	-0.6
4,924,128	+		Pf6N2E2_4233	0.43	-3.2
4,924,128	+		Pf6N2E2_4233	0.43	-1.1
4,924,129	-		Pf6N2E2_4233	0.43	-0.9
4,924,146	+		Pf6N2E2_4233	0.44	-1.4
4,924,146	+		Pf6N2E2_4233	0.44	-1.6
4,924,218	+		Pf6N2E2_4233	0.47	-0.7
4,924,218	+		Pf6N2E2_4233	0.47	-1.9
4,924,219	-		Pf6N2E2_4233	0.47	+0.3
4,924,219	-		Pf6N2E2_4233	0.47	-0.7
4,924,276	-		Pf6N2E2_4233	0.50	-0.7
4,924,489	-		Pf6N2E2_4233	0.59	+0.2
4,924,489	-		Pf6N2E2_4233	0.59	-2.6
4,924,509	+		Pf6N2E2_4233	0.60	-1.1
4,924,545	+		Pf6N2E2_4233	0.62	-0.6
4,924,546	-		Pf6N2E2_4233	0.62	-1.8
4,924,546	-		Pf6N2E2_4233	0.62	-1.0
4,924,546	-		Pf6N2E2_4233	0.62	-0.5
4,924,608	+		Pf6N2E2_4233	0.65	-0.2
4,924,608	+		Pf6N2E2_4233	0.65	-1.0
4,924,608	+		Pf6N2E2_4233	0.65	-1.5
4,924,608	+		Pf6N2E2_4233	0.65	-1.3
4,924,608	+		Pf6N2E2_4233	0.65	-2.3
4,924,609	-		Pf6N2E2_4233	0.65	-0.9
4,924,609	-		Pf6N2E2_4233	0.65	-2.3
4,924,644	+		Pf6N2E2_4233	0.66	-0.4
4,924,644	+		Pf6N2E2_4233	0.66	-0.3
4,924,644	+		Pf6N2E2_4233	0.66	-1.0
4,924,645	-		Pf6N2E2_4233	0.66	-2.6
4,924,645	-		Pf6N2E2_4233	0.66	+0.0
4,924,645	-		Pf6N2E2_4233	0.66	-1.0
4,924,645	-		Pf6N2E2_4233	0.66	-2.2
4,924,994	+		Pf6N2E2_4233	0.82	-2.8
4,924,995	-		Pf6N2E2_4233	0.82	-0.3
4,925,082	+		Pf6N2E2_4233	0.86	-0.4
4,925,082	+		Pf6N2E2_4233	0.86	-1.9
4,925,082	+		Pf6N2E2_4233	0.86	-1.9
4,925,083	-		Pf6N2E2_4233	0.86	-1.7
4,925,083	-		Pf6N2E2_4233	0.86	-1.7
4,925,083	-		Pf6N2E2_4233	0.86	-2.4
4,925,083	-		Pf6N2E2_4233	0.86	-0.9
4,925,244	+				-1.9
4,925,244	+				-1.3
4,925,244	+				-0.2
4,925,244	+				-1.1
4,925,245	-				-1.1
4,925,245	-				-0.8
4,925,250	-				-2.0
4,925,250	-				-2.3
4,925,250	-				-2.2
4,925,297	+				-1.5
4,925,298	-				-1.0
4,925,360	-				-0.2
4,925,360	-				-0.6
4,925,457	+				-0.3
4,925,457	+				+0.4
4,925,457	+				-0.3
4,925,558	+				+0.2
4,925,558	+				-1.5
4,925,559	-				-0.3
4,925,559	-				+0.1
4,925,559	-				+1.1
4,925,559	-				+1.8
4,925,610	+				+0.4
4,925,638	+				+0.9
4,925,638	+				-0.1
4,925,638	+				-0.2
4,925,638	+				-0.6
4,925,638	+				-1.0
4,925,639	-				+1.2
4,925,639	-				+0.6
4,925,639	-				-0.5
4,925,682	+				-1.0
4,925,682	+				-0.3
4,925,876	+		Pf6N2E2_4234	0.19	+0.8
4,925,876	+		Pf6N2E2_4234	0.19	+0.7
4,925,876	+		Pf6N2E2_4234	0.19	-0.2
4,925,877	-		Pf6N2E2_4234	0.19	+0.9
4,926,047	+		Pf6N2E2_4234	0.38	+0.1
4,926,047	+		Pf6N2E2_4234	0.38	-2.2
4,926,047	+		Pf6N2E2_4234	0.38	-0.5
4,926,048	-		Pf6N2E2_4234	0.38	+0.2
4,926,048	-		Pf6N2E2_4234	0.38	-0.5
4,926,189	+		Pf6N2E2_4234	0.53	-1.3
4,926,190	-		Pf6N2E2_4234	0.53	+0.1
4,926,190	-		Pf6N2E2_4234	0.53	-0.0