Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1271

Experiment: Choline Lysine 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 20 mM
1,496,686	+		Pf6N2E2_1270	0.33	-0.5
1,496,686	+		Pf6N2E2_1270	0.33	-0.3
1,497,017	-		Pf6N2E2_1270	0.56	-1.7
1,497,017	-		Pf6N2E2_1270	0.56	-0.7
1,497,076	+		Pf6N2E2_1270	0.60	-1.6
1,497,077	-		Pf6N2E2_1270	0.60	-0.9
1,497,084	+		Pf6N2E2_1270	0.60	-3.3
1,497,186	+		Pf6N2E2_1270	0.67	-1.8
1,497,186	+		Pf6N2E2_1270	0.67	-1.8
1,497,186	+		Pf6N2E2_1270	0.67	-1.3
1,497,186	+		Pf6N2E2_1270	0.67	-1.7
1,497,186	+		Pf6N2E2_1270	0.67	-1.6
1,497,187	-		Pf6N2E2_1270	0.67	-2.3
1,497,187	-		Pf6N2E2_1270	0.67	-1.9
1,497,187	-		Pf6N2E2_1270	0.67	-1.2
1,497,187	-		Pf6N2E2_1270	0.67	-2.2
1,497,223	+		Pf6N2E2_1270	0.70	-1.8
1,497,223	+		Pf6N2E2_1270	0.70	-1.1
1,497,223	+		Pf6N2E2_1270	0.70	-2.9
1,497,223	+		Pf6N2E2_1270	0.70	-2.4
1,497,223	+		Pf6N2E2_1270	0.70	-0.9
1,497,223	+		Pf6N2E2_1270	0.70	-2.2
1,497,520	+		Pf6N2E2_1270	0.90	-3.2
1,497,520	+		Pf6N2E2_1270	0.90	-1.2
1,497,521	-		Pf6N2E2_1270	0.90	-0.1
1,497,745	-				-1.5
1,497,751	-				-1.6
1,497,768	+				-2.0
1,497,768	+				-1.5
1,497,769	-				-2.5
1,498,074	+		Pf6N2E2_1271	0.13	-0.4
1,498,114	+		Pf6N2E2_1271	0.14	-1.8
1,498,115	-		Pf6N2E2_1271	0.14	-0.5
1,498,115	-		Pf6N2E2_1271	0.14	-0.1
1,498,141	-		Pf6N2E2_1271	0.15	-1.9
1,498,141	-		Pf6N2E2_1271	0.15	-0.8
1,498,149	+		Pf6N2E2_1271	0.15	-1.8
1,498,149	+		Pf6N2E2_1271	0.15	-0.8
1,498,170	+		Pf6N2E2_1271	0.16	-1.8
1,498,170	+		Pf6N2E2_1271	0.16	-1.3
1,498,171	-		Pf6N2E2_1271	0.16	-0.1
1,498,171	-		Pf6N2E2_1271	0.16	-1.5
1,498,410	+		Pf6N2E2_1271	0.24	-1.0
1,498,411	-		Pf6N2E2_1271	0.24	+0.3
1,498,478	-		Pf6N2E2_1271	0.26	-2.4
1,498,478	-		Pf6N2E2_1271	0.26	-1.1
1,498,494	+		Pf6N2E2_1271	0.27	-1.1
1,498,494	+		Pf6N2E2_1271	0.27	-2.6
1,498,494	+		Pf6N2E2_1271	0.27	-2.0
1,498,495	-		Pf6N2E2_1271	0.27	-1.1
1,498,495	-		Pf6N2E2_1271	0.27	-1.1
1,498,495	-		Pf6N2E2_1271	0.27	-1.6
1,498,518	-		Pf6N2E2_1271	0.27	-3.3
1,498,518	-		Pf6N2E2_1271	0.27	-2.2
1,498,525	-				-0.7
1,498,542	+		Pf6N2E2_1271	0.28	-2.3
1,498,542	+		Pf6N2E2_1271	0.28	-3.6
1,498,542	+		Pf6N2E2_1271	0.28	-1.4
1,498,543	-		Pf6N2E2_1271	0.28	-0.2
1,498,543	-		Pf6N2E2_1271	0.28	-1.7
1,498,543	-		Pf6N2E2_1271	0.28	+0.1
1,498,543	-		Pf6N2E2_1271	0.28	-1.6
1,498,543	-		Pf6N2E2_1271	0.28	-2.0
1,498,570	-		Pf6N2E2_1271	0.29	-2.4
1,498,570	-		Pf6N2E2_1271	0.29	-2.2
1,498,773	+		Pf6N2E2_1271	0.36	-1.9
1,498,773	+		Pf6N2E2_1271	0.36	-2.6
1,498,773	+		Pf6N2E2_1271	0.36	-1.4
1,498,773	+		Pf6N2E2_1271	0.36	+0.1
1,498,773	+		Pf6N2E2_1271	0.36	-2.3
1,498,773	+		Pf6N2E2_1271	0.36	-1.9
1,498,774	-		Pf6N2E2_1271	0.36	-3.5
1,498,774	-		Pf6N2E2_1271	0.36	-0.6
1,498,774	-		Pf6N2E2_1271	0.36	-3.4
1,498,774	-		Pf6N2E2_1271	0.36	-0.6
1,498,780	-		Pf6N2E2_1271	0.36	-0.2
1,498,780	-		Pf6N2E2_1271	0.36	-1.4
1,498,906	+		Pf6N2E2_1271	0.40	-1.7
1,498,907	-		Pf6N2E2_1271	0.40	-1.1
1,498,907	-		Pf6N2E2_1271	0.40	-1.2
1,499,139	+		Pf6N2E2_1271	0.47	-2.8
1,499,140	-		Pf6N2E2_1271	0.47	-1.0
1,499,140	-		Pf6N2E2_1271	0.47	-1.3
1,499,140	-		Pf6N2E2_1271	0.47	-1.8
1,499,140	-		Pf6N2E2_1271	0.47	-2.1
1,499,140	-		Pf6N2E2_1271	0.47	-2.8
1,499,214	-		Pf6N2E2_1271	0.50	-2.3
1,499,635	-		Pf6N2E2_1271	0.63	-2.3
1,499,640	+		Pf6N2E2_1271	0.64	-1.2
1,499,640	+		Pf6N2E2_1271	0.64	-0.7
1,499,641	-		Pf6N2E2_1271	0.64	-1.7
1,499,657	-		Pf6N2E2_1271	0.64	-1.1
1,499,852	+		Pf6N2E2_1271	0.70	-0.5
1,499,964	+		Pf6N2E2_1271	0.74	-1.4
1,499,965	-		Pf6N2E2_1271	0.74	-1.1
1,500,184	-		Pf6N2E2_1271	0.81	-1.8
1,500,248	+		Pf6N2E2_1271	0.83	-1.3
1,500,248	+		Pf6N2E2_1271	0.83	-2.5
1,500,249	-		Pf6N2E2_1271	0.83	-1.7
1,500,249	-		Pf6N2E2_1271	0.83	-1.7
1,500,266	+		Pf6N2E2_1271	0.84	-0.2
1,500,310	-		Pf6N2E2_1271	0.85	-2.2
1,500,310	-		Pf6N2E2_1271	0.85	-2.8
1,500,385	+		Pf6N2E2_1271	0.88	-2.5
1,500,387	+		Pf6N2E2_1271	0.88	-0.4
1,500,387	+		Pf6N2E2_1271	0.88	-1.5
1,500,388	-		Pf6N2E2_1271	0.88	-1.4
1,500,388	-		Pf6N2E2_1271	0.88	-2.1
1,500,397	+		Pf6N2E2_1271	0.88	-1.8
1,500,508	+				-1.9
1,500,509	-				-2.0
1,500,941	+				-2.3
1,500,942	-				+0.4
1,500,942	-				-1.1
1,500,942	-				+1.1
1,500,942	-				+0.4
1,501,022	-				-2.0
1,501,027	+				+0.5
1,501,028	-				-1.7
1,501,028	-				+0.9
1,501,143	+				-1.1
1,501,143	+				-2.7
1,501,143	+				+0.5
1,501,144	-				-1.2
1,501,144	-				-1.3
1,501,144	-				-3.9
1,501,197	+				-0.8
1,501,210	+				-3.3
1,501,210	+				-1.1
1,501,211	-				-2.0
1,501,446	+		Pf6N2E2_1272	0.16	-0.6
1,501,446	+		Pf6N2E2_1272	0.16	-0.2
1,501,447	-		Pf6N2E2_1272	0.16	-2.0
1,501,448	+		Pf6N2E2_1272	0.16	-0.1
1,501,448	+		Pf6N2E2_1272	0.16	-0.3
1,501,448	+		Pf6N2E2_1272	0.16	-0.4
1,501,448	+		Pf6N2E2_1272	0.16	-1.0
1,501,448	+		Pf6N2E2_1272	0.16	-2.2
1,501,448	+		Pf6N2E2_1272	0.16	-2.1
1,501,449	-		Pf6N2E2_1272	0.16	-1.6
1,501,449	-		Pf6N2E2_1272	0.16	+0.2
1,501,449	-		Pf6N2E2_1272	0.16	-1.5
1,501,450	+		Pf6N2E2_1272	0.16	-1.4
1,501,450	+		Pf6N2E2_1272	0.16	-2.5
1,501,450	+		Pf6N2E2_1272	0.16	-0.9
1,501,450	+		Pf6N2E2_1272	0.16	-0.9
1,501,450	+		Pf6N2E2_1272	0.16	-1.6
1,501,450	+		Pf6N2E2_1272	0.16	-3.0
1,501,450	+		Pf6N2E2_1272	0.16	+0.6
1,501,450	+		Pf6N2E2_1272	0.16	-2.3
1,501,450	+		Pf6N2E2_1272	0.16	-1.5
1,501,450	+		Pf6N2E2_1272	0.16	-0.4
1,501,450	+		Pf6N2E2_1272	0.16	-0.3
1,501,450	+		Pf6N2E2_1272	0.16	-1.7
1,501,450	+		Pf6N2E2_1272	0.16	-1.7
1,501,451	-		Pf6N2E2_1272	0.16	+0.4
1,501,451	-		Pf6N2E2_1272	0.16	-0.8
1,501,451	-		Pf6N2E2_1272	0.16	-0.3
1,501,451	-		Pf6N2E2_1272	0.16	-2.1
1,501,451	-		Pf6N2E2_1272	0.16	-1.6
1,501,451	-		Pf6N2E2_1272	0.16	-1.4
1,501,451	-		Pf6N2E2_1272	0.16	-1.3
1,501,451	-		Pf6N2E2_1272	0.16	-2.3
1,501,487	+		Pf6N2E2_1272	0.17	-2.7
1,501,488	-		Pf6N2E2_1272	0.17	-0.2
1,501,713	+		Pf6N2E2_1272	0.24	-1.3