Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2300

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
2,401,266	+		Ga0059261_2299	0.27	-3.1
2,401,266	+		Ga0059261_2299	0.27	-3.3
2,401,266	+		Ga0059261_2299	0.27	-5.3
2,401,266	+		Ga0059261_2299	0.27	-2.4
2,401,266	+		Ga0059261_2299	0.27	-4.6
2,401,267	-		Ga0059261_2299	0.27	-2.6
2,401,267	-		Ga0059261_2299	0.27	-4.1
2,401,267	-		Ga0059261_2299	0.27	-2.8
2,401,267	-		Ga0059261_2299	0.27	-1.1
2,401,267	-		Ga0059261_2299	0.27	-3.3
2,401,267	-		Ga0059261_2299	0.27	-3.5
2,401,267	-		Ga0059261_2299	0.27	-1.5
2,401,382	+		Ga0059261_2299	0.37	-3.2
2,401,382	+		Ga0059261_2299	0.37	-2.8
2,401,383	-		Ga0059261_2299	0.37	-4.6
2,401,383	-		Ga0059261_2299	0.37	-5.9
2,401,415	+		Ga0059261_2299	0.40	-4.0
2,401,415	+		Ga0059261_2299	0.40	-2.4
2,401,416	-		Ga0059261_2299	0.40	-4.1
2,401,416	-		Ga0059261_2299	0.40	-3.1
2,401,416	-		Ga0059261_2299	0.40	-4.5
2,401,416	-		Ga0059261_2299	0.40	-2.9
2,401,416	-		Ga0059261_2299	0.40	-2.9
2,401,431	+		Ga0059261_2299	0.42	-2.9
2,401,431	+		Ga0059261_2299	0.42	-3.3
2,401,431	+		Ga0059261_2299	0.42	-3.9
2,401,432	-		Ga0059261_2299	0.42	-3.9
2,401,432	-		Ga0059261_2299	0.42	-2.9
2,401,432	-		Ga0059261_2299	0.42	-4.1
2,401,500	+		Ga0059261_2299	0.48	-3.6
2,401,500	+		Ga0059261_2299	0.48	-5.4
2,401,500	+		Ga0059261_2299	0.48	-2.5
2,401,500	+		Ga0059261_2299	0.48	-5.1
2,401,501	-		Ga0059261_2299	0.48	-1.3
2,401,501	-		Ga0059261_2299	0.48	-0.7
2,401,501	-				-0.1
2,401,501	-		Ga0059261_2299	0.48	-3.3
2,401,501	-		Ga0059261_2299	0.48	-2.8
2,401,501	-		Ga0059261_2299	0.48	-2.6
2,401,501	-		Ga0059261_2299	0.48	-4.8
2,401,501	-		Ga0059261_2299	0.48	-2.1
2,401,501	-		Ga0059261_2299	0.48	-2.8
2,401,501	-		Ga0059261_2299	0.48	-2.1
2,401,501	-		Ga0059261_2299	0.48	-3.9
2,401,502	+		Ga0059261_2299	0.48	-2.6
2,401,502	+		Ga0059261_2299	0.48	-2.8
2,401,502	+		Ga0059261_2299	0.48	-4.7
2,401,502	+		Ga0059261_2299	0.48	-3.1
2,401,502	+		Ga0059261_2299	0.48	-1.1
2,401,503	-		Ga0059261_2299	0.48	-2.2
2,401,503	-		Ga0059261_2299	0.48	-4.1
2,401,503	-		Ga0059261_2299	0.48	-3.2
2,401,503	-		Ga0059261_2299	0.48	-4.7
2,401,503	-		Ga0059261_2299	0.48	-3.6
2,401,511	+		Ga0059261_2299	0.49	-3.5
2,401,511	+		Ga0059261_2299	0.49	-2.2
2,401,511	+		Ga0059261_2299	0.49	-3.3
2,401,511	+		Ga0059261_2299	0.49	-5.4
2,401,512	-		Ga0059261_2299	0.49	-3.9
2,401,512	-		Ga0059261_2299	0.49	-4.0
2,401,512	-		Ga0059261_2299	0.49	-0.7
2,401,586	+		Ga0059261_2299	0.55	-4.2
2,401,586	+		Ga0059261_2299	0.55	-3.8
2,401,586	+		Ga0059261_2299	0.55	-3.8
2,401,586	+		Ga0059261_2299	0.55	-3.8
2,401,586	+		Ga0059261_2299	0.55	-0.4
2,401,586	+		Ga0059261_2299	0.55	-6.0
2,401,586	+		Ga0059261_2299	0.55	-3.2
2,401,587	-		Ga0059261_2299	0.55	-2.0
2,401,587	-		Ga0059261_2299	0.55	-3.3
2,401,587	-		Ga0059261_2299	0.55	-3.3
2,401,587	-		Ga0059261_2299	0.55	-3.9
2,401,587	-		Ga0059261_2299	0.55	-4.2
2,401,587	-		Ga0059261_2299	0.55	-4.5
2,401,587	-		Ga0059261_2299	0.55	-4.1
2,401,587	-		Ga0059261_2299	0.55	-3.0
2,401,587	-		Ga0059261_2299	0.55	-4.9
2,401,587	-		Ga0059261_2299	0.55	-4.2
2,401,587	-				-1.5
2,401,587	-		Ga0059261_2299	0.55	-2.6
2,401,587	-		Ga0059261_2299	0.55	-3.7
2,401,587	-		Ga0059261_2299	0.55	-2.4
2,401,587	-		Ga0059261_2299	0.55	-1.3
2,401,749	-		Ga0059261_2299	0.70	-3.1
2,401,749	-		Ga0059261_2299	0.70	-5.2
2,401,757	+		Ga0059261_2299	0.70	-2.4
2,401,757	+		Ga0059261_2299	0.70	-5.2
2,401,757	+		Ga0059261_2299	0.70	-1.8
2,401,757	+		Ga0059261_2299	0.70	-3.6
2,401,757	+		Ga0059261_2299	0.70	-4.1
2,401,757	+		Ga0059261_2299	0.70	-3.9
2,401,757	+		Ga0059261_2299	0.70	-3.5
2,401,757	+		Ga0059261_2299	0.70	-3.4
2,401,757	+		Ga0059261_2299	0.70	-4.5
2,401,757	+		Ga0059261_2299	0.70	-3.5
2,401,758	-		Ga0059261_2299	0.70	-4.3
2,401,758	-		Ga0059261_2299	0.70	-3.3
2,401,758	-		Ga0059261_2299	0.70	-2.8
2,401,758	-		Ga0059261_2299	0.70	-4.7
2,401,758	-		Ga0059261_2299	0.70	-1.3
2,401,758	-		Ga0059261_2299	0.70	-4.0
2,401,758	-		Ga0059261_2299	0.70	-3.5
2,401,829	+		Ga0059261_2299	0.77	-2.7
2,401,829	+		Ga0059261_2299	0.77	-1.4
2,401,829	+		Ga0059261_2299	0.77	-2.5
2,401,830	-		Ga0059261_2299	0.77	-4.3
2,401,830	-		Ga0059261_2299	0.77	-3.6
2,401,830	-		Ga0059261_2299	0.77	-4.0
2,401,830	-		Ga0059261_2299	0.77	-4.2
2,401,904	+		Ga0059261_2299	0.83	-3.9
2,402,033	+				-2.7
2,402,033	+				-4.5
2,402,033	+				-3.3
2,402,033	+				-4.3
2,402,034	-				-4.7
2,402,034	-				-7.0
2,402,034	-				-3.1
2,402,034	-				-1.8
2,402,034	-				-1.3
2,402,034	-				-2.3
2,402,034	-				-3.5
2,402,034	-				-4.5
2,402,034	-				-1.7
2,402,116	+				-5.5
2,402,150	+				+0.0
2,402,150	+				+0.3
2,402,150	+				+0.1
2,402,150	+				-0.1
2,402,150	+				-0.2
2,402,150	+				+0.4
2,402,150	+				-0.1
2,402,150	+				-1.7
2,402,150	+				-0.6
2,402,151	-				-0.3
2,402,151	-				-0.8
2,402,151	-				+0.6
2,402,151	-				+0.1
2,402,151	-				-0.8
2,402,151	-				+0.3
2,402,449	+		Ga0059261_2300	0.17	+0.6
2,402,450	-		Ga0059261_2300	0.17	-2.6
2,402,450	-		Ga0059261_2300	0.17	-0.8
2,402,482	+		Ga0059261_2300	0.19	+0.1
2,402,482	+		Ga0059261_2300	0.19	+0.7
2,402,482	+		Ga0059261_2300	0.19	+0.5
2,402,482	+		Ga0059261_2300	0.19	-0.6
2,402,482	+		Ga0059261_2300	0.19	-0.8
2,402,482	+		Ga0059261_2300	0.19	+0.0
2,402,482	+		Ga0059261_2300	0.19	+0.3
2,402,482	+		Ga0059261_2300	0.19	+0.0
2,402,482	+		Ga0059261_2300	0.19	+0.1
2,402,482	+		Ga0059261_2300	0.19	-0.3
2,402,482	+		Ga0059261_2300	0.19	+0.4
2,402,482	+		Ga0059261_2300	0.19	+0.0
2,402,482	+		Ga0059261_2300	0.19	-0.0
2,402,482	+		Ga0059261_2300	0.19	+1.5
2,402,483	-		Ga0059261_2300	0.19	+0.5
2,402,483	-		Ga0059261_2300	0.19	-0.3
2,402,483	-		Ga0059261_2300	0.19	+0.7
2,402,483	-		Ga0059261_2300	0.19	+1.0
2,402,483	-		Ga0059261_2300	0.19	+0.5
2,402,483	-		Ga0059261_2300	0.19	+0.0
2,402,483	-		Ga0059261_2300	0.19	+0.7
2,402,493	+		Ga0059261_2300	0.20	+0.1
2,402,493	+		Ga0059261_2300	0.20	+0.8
2,402,493	+		Ga0059261_2300	0.20	-0.0
2,402,493	+		Ga0059261_2300	0.20	-0.1
2,402,493	+		Ga0059261_2300	0.20	+0.8
2,402,493	+		Ga0059261_2300	0.20	+0.2
2,402,493	+		Ga0059261_2300	0.20	-0.2
2,402,494	-		Ga0059261_2300	0.20	+0.6
2,402,494	-				-0.8
2,402,767	+		Ga0059261_2300	0.38	+0.1
2,402,767	+		Ga0059261_2300	0.38	+0.3
2,402,767	+		Ga0059261_2300	0.38	+0.1
2,402,767	+		Ga0059261_2300	0.38	+0.3
2,402,767	+		Ga0059261_2300	0.38	-0.5
2,402,768	-		Ga0059261_2300	0.38	-0.3
2,402,768	-		Ga0059261_2300	0.38	-0.4
2,402,768	-		Ga0059261_2300	0.38	-0.2
2,402,768	-		Ga0059261_2300	0.38	-0.3
2,402,842	+		Ga0059261_2300	0.42	-0.2
2,402,843	-		Ga0059261_2300	0.43	-0.4
2,402,944	+		Ga0059261_2300	0.49	+0.7
2,402,944	+		Ga0059261_2300	0.49	+0.6
2,402,944	+		Ga0059261_2300	0.49	-0.8
2,402,944	+		Ga0059261_2300	0.49	-0.5
2,402,944	+		Ga0059261_2300	0.49	-0.3
2,402,944	+		Ga0059261_2300	0.49	+0.3
2,402,944	+		Ga0059261_2300	0.49	+0.0
2,402,945	-		Ga0059261_2300	0.49	+0.0
2,402,945	-		Ga0059261_2300	0.49	+0.8
2,402,945	-		Ga0059261_2300	0.49	+0.3
2,402,945	-		Ga0059261_2300	0.49	-1.5
2,403,096	+		Ga0059261_2300	0.59	-0.9
2,403,097	-		Ga0059261_2300	0.59	+0.1
2,403,097	-		Ga0059261_2300	0.59	+0.2
2,403,248	+		Ga0059261_2300	0.69	-0.3
2,403,249	-		Ga0059261_2300	0.69	-0.3
2,403,289	+		Ga0059261_2300	0.71	+0.3
2,403,289	+		Ga0059261_2300	0.71	-0.3
2,403,520	+		Ga0059261_2300	0.86	+0.5
2,403,520	+		Ga0059261_2300	0.86	+0.5
2,403,520	+		Ga0059261_2300	0.86	-0.6
2,403,520	+		Ga0059261_2300	0.86	+0.2
2,403,520	+		Ga0059261_2300	0.86	-1.9
2,403,521	-		Ga0059261_2300	0.86	+0.4
2,403,522	+		Ga0059261_2300	0.86	-0.8
2,403,522	+		Ga0059261_2300	0.86	-0.2
2,403,522	+		Ga0059261_2300	0.86	+0.0
2,403,522	+		Ga0059261_2300	0.86	+0.2
2,403,522	+		Ga0059261_2300	0.86	-1.0
2,403,522	+		Ga0059261_2300	0.86	+0.5
2,403,522	+		Ga0059261_2300	0.86	-0.1
2,403,523	-		Ga0059261_2300	0.86	-0.5
2,403,523	-		Ga0059261_2300	0.86	+0.3
2,403,523	-		Ga0059261_2300	0.86	-0.5
2,403,774	+				-1.1
2,403,775	-				-3.8
2,403,886	+				-3.8
2,403,887	-				-1.6
2,403,887	-				-3.6
2,403,887	-				-4.1
2,403,895	+				-1.8
2,403,896	-				-4.5
2,403,896	-				-3.5
2,403,896	-				-1.5
2,403,896	-				-3.8
2,404,402	+		Ga0059261_2301	0.55	-5.4
2,404,402	+		Ga0059261_2301	0.55	-2.5
2,404,402	+		Ga0059261_2301	0.55	-4.8
2,404,402	+		Ga0059261_2301	0.55	-2.5
2,404,402	+		Ga0059261_2301	0.55	-4.0
2,404,403	-		Ga0059261_2301	0.55	-3.9
2,404,403	-		Ga0059261_2301	0.55	-4.9
2,404,403	-		Ga0059261_2301	0.55	-3.9
2,404,403	-		Ga0059261_2301	0.55	-2.0
2,404,405	+		Ga0059261_2301	0.55	-2.5
2,404,405	+		Ga0059261_2301	0.55	-4.4
2,404,405	+		Ga0059261_2301	0.55	-1.0
2,404,405	+		Ga0059261_2301	0.55	-3.8
2,404,405	+		Ga0059261_2301	0.55	-2.8
2,404,405	+		Ga0059261_2301	0.55	-4.6
2,404,406	-		Ga0059261_2301	0.55	-4.6
2,404,406	-		Ga0059261_2301	0.55	-3.1
2,404,406	-		Ga0059261_2301	0.55	-4.9
2,404,406	-		Ga0059261_2301	0.55	-3.1
2,404,406	-		Ga0059261_2301	0.55	-2.7
2,404,406	-		Ga0059261_2301	0.55	-2.7
2,404,406	-		Ga0059261_2301	0.55	-3.4
2,404,406	-		Ga0059261_2301	0.55	-3.4
2,404,406	-		Ga0059261_2301	0.55	-5.0
2,404,458	+		Ga0059261_2301	0.60	-5.1
2,404,458	+		Ga0059261_2301	0.60	-1.5
2,404,458	+		Ga0059261_2301	0.60	-2.7
2,404,458	+		Ga0059261_2301	0.60	-4.1
2,404,458	+		Ga0059261_2301	0.60	-4.0
2,404,458	+		Ga0059261_2301	0.60	-2.6
2,404,459	-		Ga0059261_2301	0.60	-2.1
2,404,459	-		Ga0059261_2301	0.60	-4.7
2,404,459	-		Ga0059261_2301	0.60	-5.8
2,404,459	-		Ga0059261_2301	0.60	-0.5
2,404,459	-		Ga0059261_2301	0.60	-3.4
2,404,465	+		Ga0059261_2301	0.61	-3.1
2,404,465	+		Ga0059261_2301	0.61	-4.2
2,404,465	+		Ga0059261_2301	0.61	-0.8
2,404,465	+		Ga0059261_2301	0.61	-5.3
2,404,465	+		Ga0059261_2301	0.61	-2.6
2,404,465	+		Ga0059261_2301	0.61	-4.5
2,404,466	-		Ga0059261_2301	0.61	-2.3
2,404,466	-		Ga0059261_2301	0.61	-4.0
2,404,466	-		Ga0059261_2301	0.61	-2.1
2,404,466	-		Ga0059261_2301	0.61	-3.8
2,404,466	-		Ga0059261_2301	0.61	-3.3
2,404,466	-		Ga0059261_2301	0.61	-2.5
2,404,466	-		Ga0059261_2301	0.61	-1.3
2,404,466	-		Ga0059261_2301	0.61	-3.2
2,404,466	-		Ga0059261_2301	0.61	-3.3
2,404,466	-		Ga0059261_2301	0.61	-5.7
2,404,466	-		Ga0059261_2301	0.61	-4.1
2,404,466	-		Ga0059261_2301	0.61	-3.7
2,404,564	+		Ga0059261_2301	0.70	-3.3
2,404,564	+		Ga0059261_2301	0.70	-3.9
2,404,564	+		Ga0059261_2301	0.70	-5.1
2,404,565	-		Ga0059261_2301	0.70	-2.5
2,404,615	+		Ga0059261_2301	0.74	-5.8
2,404,615	+		Ga0059261_2301	0.74	-3.1
2,404,615	+		Ga0059261_2301	0.74	-4.5
2,404,615	+		Ga0059261_2301	0.74	-3.9
2,404,616	-		Ga0059261_2301	0.74	-5.0
2,404,616	-		Ga0059261_2301	0.74	-1.6
2,404,616	-		Ga0059261_2301	0.74	-1.1
2,404,616	-		Ga0059261_2301	0.74	-1.7
2,404,616	-		Ga0059261_2301	0.74	-2.8
2,404,616	-		Ga0059261_2301	0.74	-2.1
2,404,621	+		Ga0059261_2301	0.75	-1.1
2,404,621	+		Ga0059261_2301	0.75	-3.4
2,404,621	+		Ga0059261_2301	0.75	-2.5
2,404,621	+		Ga0059261_2301	0.75	-4.2
2,404,621	+		Ga0059261_2301	0.75	-4.2
2,404,621	+		Ga0059261_2301	0.75	-3.1
2,404,621	+		Ga0059261_2301	0.75	-3.4
2,404,621	+		Ga0059261_2301	0.75	-4.0
2,404,621	+		Ga0059261_2301	0.75	-3.6
2,404,621	+		Ga0059261_2301	0.75	-2.3
2,404,621	+		Ga0059261_2301	0.75	-1.7
2,404,621	+		Ga0059261_2301	0.75	-4.2
2,404,622	-		Ga0059261_2301	0.75	-5.2
2,404,622	-		Ga0059261_2301	0.75	-4.1
2,404,622	-		Ga0059261_2301	0.75	-2.8
2,404,622	-		Ga0059261_2301	0.75	-3.0
2,404,622	-		Ga0059261_2301	0.75	-1.7
2,404,622	-				-0.8
2,404,622	-		Ga0059261_2301	0.75	-1.3
2,404,642	+		Ga0059261_2301	0.77	-3.8
2,404,642	+		Ga0059261_2301	0.77	-0.1
2,404,643	-		Ga0059261_2301	0.77	-4.5
2,404,643	-		Ga0059261_2301	0.77	-4.2
2,404,643	-		Ga0059261_2301	0.77	-3.0
2,404,643	-		Ga0059261_2301	0.77	-4.6
2,404,643	-		Ga0059261_2301	0.77	-3.6