Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03567

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
3,719,966	-		CCNA_03565	0.42	-0.6
3,719,975	+		CCNA_03565	0.44	+1.7
3,719,983	-		CCNA_03565	0.47	+0.1
3,720,008	+		CCNA_03565	0.55	+0.9
3,720,016	-		CCNA_03565	0.57	-1.0
3,720,016	-		CCNA_03565	0.57	-0.4
3,720,033	+		CCNA_03565	0.62	-0.1
3,720,033	+		CCNA_03565	0.62	+3.0
3,720,033	+		CCNA_03565	0.62	-1.3
3,720,033	+		CCNA_03565	0.62	+0.3
3,720,033	+		CCNA_03565	0.62	-0.3
3,720,041	-		CCNA_03565	0.65	+1.0
3,720,042	-		CCNA_03565	0.65	-0.6
3,720,042	-		CCNA_03565	0.65	-0.9
3,720,057	-		CCNA_03565	0.70	-0.8
3,720,062	-		CCNA_03565	0.71	-0.5
3,720,117	-		CCNA_03565	0.88	+0.4
3,720,121	+		CCNA_03565	0.90	+0.6
3,720,188	-				-0.5
3,720,198	-				+0.0
3,720,227	+				+0.1
3,720,377	+				+1.2
3,720,378	+				+0.4
3,720,398	+				-1.6
3,720,412	+				-2.0
3,720,413	-				-0.2
3,720,434	+				+1.9
3,720,442	-		CCNA_03993	0.10	+1.4
3,720,442	-		CCNA_03993	0.10	+0.2
3,720,454	+		CCNA_03993	0.13	+1.3
3,720,454	+		CCNA_03993	0.13	-1.3
3,720,462	-		CCNA_03993	0.15	+0.3
3,720,462	-		CCNA_03993	0.15	-0.4
3,720,467	+		CCNA_03993	0.16	-0.4
3,720,469	-		CCNA_03993	0.17	+0.5
3,720,516	+		CCNA_03993	0.28	-0.4
3,720,565	+		CCNA_03993	0.40	-0.4
3,720,565	+		CCNA_03993	0.40	-0.6
3,720,568	-		CCNA_03993	0.40	+0.4
3,720,568	-		CCNA_03993	0.40	+0.9
3,720,582	-		CCNA_03993	0.44	-1.0
3,720,597	-		CCNA_03993	0.47	-0.6
3,720,597	-		CCNA_03993	0.47	+0.7
3,720,597	-		CCNA_03993	0.47	-2.9
3,720,616	-		CCNA_03993	0.52	+0.2
3,720,616	-		CCNA_03993	0.52	-0.5
3,720,622	+		CCNA_03993	0.53	+0.5
3,720,622	+		CCNA_03993	0.53	-1.5
3,720,622	+		CCNA_03993	0.53	+0.1
3,720,622	+		CCNA_03993	0.53	+1.1
3,720,630	-		CCNA_03993	0.55	-1.1
3,720,630	-		CCNA_03993	0.55	-0.1
3,720,630	-		CCNA_03993	0.55	-0.4
3,720,630	-		CCNA_03993	0.55	-1.2
3,720,630	-		CCNA_03993	0.55	-2.4
3,720,750	-		CCNA_03993	0.84	-0.5
3,720,833	+				+0.7
3,720,833	+				+1.3
3,720,833	+				-0.7
3,720,838	+				+0.9
3,720,841	-				+0.3
3,720,841	-				-0.3
3,720,841	-				+3.0
3,720,841	-				-0.8
3,720,841	-				-0.8
3,720,841	-				+0.2
3,720,846	-				-0.7
3,720,868	-				+0.2
3,720,933	-				+0.2
3,720,948	+				+0.7
3,720,962	-				+0.0
3,720,988	-				-1.1
3,720,999	-				+0.2
3,720,999	-				-1.0
3,721,048	-				-0.3
3,721,058	+				-0.4
3,721,071	-				-1.4
3,721,071	-				+2.0
3,721,085	+		CCNA_03567	0.10	-0.1
3,721,093	-		CCNA_03567	0.11	-0.4
3,721,103	-		CCNA_03567	0.12	-0.9
3,721,134	-		CCNA_03567	0.14	-0.6
3,721,147	-		CCNA_03567	0.15	-0.3
3,721,183	+		CCNA_03567	0.18	+0.1
3,721,193	+		CCNA_03567	0.19	+0.9
3,721,193	+		CCNA_03567	0.19	+0.9
3,721,201	-		CCNA_03567	0.19	-0.9
3,721,201	-		CCNA_03567	0.19	+0.0
3,721,201	-		CCNA_03567	0.19	+0.1
3,721,201	-		CCNA_03567	0.19	+0.7
3,721,201	-		CCNA_03567	0.19	+1.2
3,721,201	-		CCNA_03567	0.19	-0.6
3,721,201	-		CCNA_03567	0.19	+0.3
3,721,207	-		CCNA_03567	0.20	+1.0
3,721,209	+		CCNA_03567	0.20	-1.5
3,721,219	+		CCNA_03567	0.20	-0.7
3,721,236	+		CCNA_03567	0.22	-1.0
3,721,241	+		CCNA_03567	0.22	+0.6
3,721,266	+		CCNA_03567	0.24	-1.2
3,721,267	+		CCNA_03567	0.24	-1.3
3,721,267	+		CCNA_03567	0.24	-0.3
3,721,274	-		CCNA_03567	0.25	+0.3
3,721,275	-		CCNA_03567	0.25	-0.1
3,721,275	-		CCNA_03567	0.25	+0.0
3,721,275	-		CCNA_03567	0.25	+0.3
3,721,277	+		CCNA_03567	0.25	-1.8
3,721,277	+		CCNA_03567	0.25	+0.4
3,721,408	+		CCNA_03567	0.35	+0.7
3,721,408	+		CCNA_03567	0.35	-1.3
3,721,408	+		CCNA_03567	0.35	-0.6
3,721,408	+				+1.7
3,721,416	-		CCNA_03567	0.36	-0.7
3,721,416	-		CCNA_03567	0.36	+0.4
3,721,418	+		CCNA_03567	0.36	+0.9
3,721,426	-		CCNA_03567	0.36	+0.9
3,721,431	-		CCNA_03567	0.37	+0.5
3,721,433	-		CCNA_03567	0.37	+0.2
3,721,435	+		CCNA_03567	0.37	-0.2
3,721,451	+		CCNA_03567	0.38	-1.6
3,721,457	+		CCNA_03567	0.39	-1.4
3,721,459	-		CCNA_03567	0.39	-0.2
3,721,488	-		CCNA_03567	0.41	-1.7
3,721,512	+		CCNA_03567	0.43	+1.9
3,721,518	-		CCNA_03567	0.43	-0.4
3,721,525	-		CCNA_03567	0.44	-2.1
3,721,525	-		CCNA_03567	0.44	+3.0
3,721,550	-		CCNA_03567	0.46	-1.8
3,721,550	-		CCNA_03567	0.46	+1.2
3,721,576	-		CCNA_03567	0.48	+2.0
3,721,595	+		CCNA_03567	0.49	-1.2
3,721,603	+		CCNA_03567	0.50	+0.0
3,721,605	-		CCNA_03567	0.50	+0.2
3,721,610	-		CCNA_03567	0.50	-1.1
3,721,614	+		CCNA_03567	0.51	-0.7
3,721,614	+		CCNA_03567	0.51	-0.1
3,721,622	-		CCNA_03567	0.51	-2.0
3,721,652	+		CCNA_03567	0.54	+1.2
3,721,660	-		CCNA_03567	0.54	-2.9
3,721,661	-		CCNA_03567	0.54	+1.6
3,721,741	+		CCNA_03567	0.60	+0.0
3,721,749	-		CCNA_03567	0.61	-0.7
3,721,753	+		CCNA_03567	0.61	+2.0
3,721,758	+		CCNA_03567	0.62	-0.5
3,721,758	+		CCNA_03567	0.62	+0.4
3,721,758	+		CCNA_03567	0.62	+0.0
3,721,761	-		CCNA_03567	0.62	+0.4
3,721,773	+		CCNA_03567	0.63	-0.1
3,721,833	-		CCNA_03567	0.67	-0.7
3,721,846	+		CCNA_03567	0.68	-0.8
3,721,905	-		CCNA_03567	0.73	-1.4
3,721,926	-		CCNA_03567	0.75	-1.3
3,721,936	-		CCNA_03567	0.75	-0.4
3,721,936	-		CCNA_03567	0.75	-0.7
3,721,974	+		CCNA_03567	0.78	+0.1
3,721,974	+		CCNA_03567	0.78	-0.1
3,721,982	-		CCNA_03567	0.79	-0.4
3,722,019	+		CCNA_03567	0.82	-0.9
3,722,019	+		CCNA_03567	0.82	+0.0
3,722,027	-		CCNA_03567	0.82	-0.4
3,722,033	+		CCNA_03567	0.83	-0.9
3,722,041	-		CCNA_03567	0.83	+0.4
3,722,054	-		CCNA_03567	0.84	+0.6
3,722,076	+		CCNA_03567	0.86	-0.8
3,722,134	-				+0.9
3,722,134	-				-1.3
3,722,134	-				-0.8
3,722,212	+				-1.1
3,722,245	+				+0.0
3,722,246	+				-1.7
3,722,252	+				-1.9
3,722,252	+				+1.4
3,722,252	+				+0.2
3,722,252	+				-0.7
3,722,259	+				-0.3
3,722,260	-				-0.5
3,722,267	+				+0.1
3,722,275	-				+3.0
3,722,330	+				+0.8
3,722,338	-				+0.1
3,722,417	+		CCNA_03568	0.10	+1.7
3,722,430	-		CCNA_03568	0.12	+0.7
3,722,439	+		CCNA_03568	0.14	-0.2
3,722,447	-		CCNA_03568	0.15	+2.4
3,722,469	+		CCNA_03568	0.18	+0.6
3,722,491	+		CCNA_03568	0.22	+0.4
3,722,499	-		CCNA_03568	0.23	-0.3
3,722,503	+		CCNA_03568	0.24	+1.0
3,722,508	+		CCNA_03568	0.24	+0.4
3,722,513	+		CCNA_03568	0.25	+0.1
3,722,526	-		CCNA_03568	0.27	+0.7
3,722,550	+		CCNA_03568	0.31	-1.0
3,722,550	+		CCNA_03568	0.31	+0.3
3,722,550	+		CCNA_03568	0.31	-1.5
3,722,550	+		CCNA_03568	0.31	+0.9
3,722,558	-		CCNA_03568	0.32	-0.5
3,722,558	-		CCNA_03568	0.32	+0.3
3,722,560	+		CCNA_03568	0.32	-0.8
3,722,560	+		CCNA_03568	0.32	+2.1
3,722,565	+		CCNA_03568	0.33	-0.7
3,722,566	+		CCNA_03568	0.33	-1.3
3,722,568	-		CCNA_03568	0.33	-2.1
3,722,590	+		CCNA_03568	0.37	-1.8
3,722,606	+		CCNA_03568	0.39	+0.3
3,722,616	+		CCNA_03568	0.41	+1.0
3,722,616	+		CCNA_03568	0.41	-0.8
3,722,616	+		CCNA_03568	0.41	-2.1
3,722,616	+		CCNA_03568	0.41	-2.1
3,722,616	+		CCNA_03568	0.41	+1.3
3,722,624	-		CCNA_03568	0.42	+1.0
3,722,624	-		CCNA_03568	0.42	+2.4
3,722,624	-		CCNA_03568	0.42	+0.8
3,722,624	-		CCNA_03568	0.42	+0.2
3,722,624	-		CCNA_03568	0.42	+0.0
3,722,639	+		CCNA_03568	0.44	+0.5
3,722,674	+		CCNA_03568	0.50	-0.7
3,722,713	-		CCNA_03568	0.56	+1.7
3,722,717	+		CCNA_03568	0.56	-0.5
3,722,725	-		CCNA_03568	0.58	+0.4
3,722,737	-		CCNA_03568	0.59	+0.1
3,722,737	-		CCNA_03568	0.59	+0.8
3,722,765	+		CCNA_03568	0.64	-2.2
3,722,801	+		CCNA_03568	0.69	-1.8
3,722,809	-		CCNA_03568	0.71	-1.2
3,722,828	-		CCNA_03568	0.73	+0.7
3,722,838	-		CCNA_03568	0.75	+2.0
3,722,838	-		CCNA_03568	0.75	-1.8
3,722,856	-		CCNA_03568	0.78	+2.4
3,722,859	-		CCNA_03568	0.78	-0.6
3,722,861	+		CCNA_03568	0.78	+0.4
3,722,866	+		CCNA_03568	0.79	-0.8
3,722,871	+		CCNA_03568	0.80	-0.5
3,722,871	+		CCNA_03568	0.80	+0.2
3,722,871	+		CCNA_03568	0.80	-1.8
3,722,871	+		CCNA_03568	0.80	-1.2
3,722,874	-		CCNA_03568	0.80	+3.4
3,722,878	+		CCNA_03568	0.81	-0.3
3,722,879	-		CCNA_03568	0.81	-0.5
3,722,879	-		CCNA_03568	0.81	-1.3
3,722,909	-		CCNA_03568	0.86	-1.9
3,722,935	+		CCNA_03568	0.90	-1.0
3,722,935	+		CCNA_03568	0.90	-0.3
3,722,955	+				+1.9
3,722,960	+				-0.6
3,722,992	+				-0.8
3,723,000	-				-0.3
3,723,002	+				+0.4
3,723,039	+				-0.8
3,723,039	+				+0.2
3,723,047	-				+1.3
3,723,047	-				-0.4
3,723,047	-				-0.7
3,723,063	+				+0.3
3,723,067	+				-0.3
3,723,071	-				+0.3
3,723,071	-				-2.7
3,723,079	+				-2.0
3,723,080	-				-2.6
3,723,082	-				+0.4
3,723,106	-		CCNA_03569	0.11	+1.3
3,723,133	-		CCNA_03569	0.14	-0.2
3,723,167	+		CCNA_03569	0.18	-1.7
3,723,170	-		CCNA_03569	0.18	-0.8
3,723,170	-		CCNA_03569	0.18	+1.8
3,723,170	-		CCNA_03569	0.18	+0.9
3,723,170	-		CCNA_03569	0.18	-0.7
3,723,184	-		CCNA_03569	0.20	-0.0
3,723,194	-		CCNA_03569	0.21	-0.1
3,723,197	+		CCNA_03569	0.21	-1.3
3,723,203	-		CCNA_03569	0.22	+0.6
3,723,205	-		CCNA_03569	0.22	-1.0
3,723,205	-		CCNA_03569	0.22	+0.3
3,723,205	-		CCNA_03569	0.22	-1.2
3,723,222	+		CCNA_03569	0.24	-2.4
3,723,230	-		CCNA_03569	0.25	-0.5
3,723,248	-		CCNA_03569	0.27	-0.7