Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03467

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
3,629,441	-				-0.9
3,629,441	-				-0.5
3,629,502	-				-0.0
3,629,505	+				-1.3
3,629,505	+				+0.9
3,629,512	-				+0.6
3,629,517	+				+0.2
3,629,546	-				+0.7
3,629,550	+				-0.3
3,629,550	+				-0.2
3,629,550	+				-0.3
3,629,550	+				-0.2
3,629,550	+				-0.2
3,629,550	+				-0.4
3,629,550	+				+0.2
3,629,558	-				-0.3
3,629,558	-				-0.9
3,629,558	-				-1.8
3,629,658	-				-0.4
3,629,721	-		CCNA_03466	0.11	+0.9
3,629,746	+		CCNA_03466	0.14	-0.7
3,629,746	-		CCNA_03466	0.14	-0.9
3,629,786	+		CCNA_03466	0.19	+0.1
3,629,800	+		CCNA_03466	0.21	+1.1
3,629,800	+		CCNA_03466	0.21	-2.0
3,629,802	-		CCNA_03466	0.21	-0.3
3,629,808	-		CCNA_03466	0.22	+0.8
3,629,880	+		CCNA_03466	0.31	+1.5
3,629,886	+		CCNA_03466	0.31	+1.1
3,629,945	+		CCNA_03466	0.39	+1.0
3,629,948	+		CCNA_03466	0.39	-0.4
3,629,953	-		CCNA_03466	0.40	-1.4
3,630,000	+		CCNA_03466	0.46	-1.3
3,630,000	+		CCNA_03466	0.46	+0.6
3,630,018	-		CCNA_03466	0.48	+0.5
3,630,060	+		CCNA_03466	0.53	+0.8
3,630,089	+		CCNA_03466	0.57	-0.2
3,630,138	+		CCNA_03466	0.63	+0.4
3,630,138	+		CCNA_03466	0.63	-0.9
3,630,138	+		CCNA_03466	0.63	-0.7
3,630,138	+		CCNA_03466	0.63	+0.6
3,630,138	+		CCNA_03466	0.63	+1.7
3,630,138	+		CCNA_03466	0.63	-1.3
3,630,138	+		CCNA_03466	0.63	+0.9
3,630,146	-		CCNA_03466	0.64	+2.2
3,630,146	-		CCNA_03466	0.64	+0.2
3,630,153	-		CCNA_03466	0.65	-0.5
3,630,175	+		CCNA_03466	0.67	+1.2
3,630,194	+		CCNA_03466	0.70	-0.1
3,630,201	+		CCNA_03466	0.71	+0.1
3,630,202	-		CCNA_03466	0.71	+0.2
3,630,232	+		CCNA_03466	0.74	-1.2
3,630,271	-		CCNA_03466	0.79	-1.0
3,630,271	-		CCNA_03466	0.79	-1.9
3,630,286	-		CCNA_03466	0.81	-0.5
3,630,286	-		CCNA_03466	0.81	+0.6
3,630,299	+		CCNA_03466	0.83	+0.6
3,630,307	-		CCNA_03466	0.84	+0.2
3,630,345	-		CCNA_03466	0.88	-1.6
3,630,352	+		CCNA_03466	0.89	-1.2
3,630,352	+		CCNA_03466	0.89	+1.1
3,630,383	-				+1.5
3,630,384	-				-1.3
3,630,384	-				-1.0
3,630,433	-				-1.2
3,630,439	-				-1.1
3,630,451	+				+0.2
3,630,464	-				+2.1
3,630,468	+				-1.9
3,630,491	+				-2.3
3,630,498	+				-1.1
3,630,498	+				+0.6
3,630,498	+				-0.5
3,630,500	-				-1.1
3,630,506	-				+0.2
3,630,521	-				-0.3
3,630,560	-				+0.1
3,630,572	-				+0.5
3,630,594	-				-0.8
3,630,606	+				-1.4
3,630,611	+				+0.2
3,630,618	+				+1.7
3,630,618	+				+0.2
3,630,618	+				+0.9
3,630,618	+				-1.2
3,630,618	+				-0.4
3,630,618	+				-0.3
3,630,619	-				-1.9
3,630,626	-				+0.4
3,630,626	-				-0.6
3,630,626	-				+0.5
3,630,626	-				-1.3
3,630,680	-				-0.9
3,630,689	+		CCNA_03467	0.10	-0.4
3,630,779	+		CCNA_03467	0.14	-0.5
3,630,786	+		CCNA_03467	0.14	+0.9
3,630,791	+		CCNA_03467	0.14	-1.8
3,630,812	-		CCNA_03467	0.15	-0.3
3,630,837	+		CCNA_03467	0.16	-0.6
3,630,845	-		CCNA_03467	0.16	+1.5
3,630,859	-		CCNA_03467	0.17	-0.4
3,630,859	-		CCNA_03467	0.17	-0.2
3,630,872	-		CCNA_03467	0.17	-1.0
3,630,872	-		CCNA_03467	0.17	-0.9
3,630,879	+		CCNA_03467	0.18	-0.7
3,630,879	+		CCNA_03467	0.18	+0.5
3,630,887	-		CCNA_03467	0.18	-1.9
3,630,887	-		CCNA_03467	0.18	-0.1
3,630,887	-		CCNA_03467	0.18	-0.1
3,630,953	+		CCNA_03467	0.21	+0.9
3,630,953	-		CCNA_03467	0.21	+0.6
3,630,961	-		CCNA_03467	0.21	-0.5
3,630,962	-		CCNA_03467	0.21	-1.2
3,630,990	-		CCNA_03467	0.22	-0.0
3,630,997	+		CCNA_03467	0.22	-0.6
3,631,087	+		CCNA_03467	0.26	+0.6
3,631,095	-		CCNA_03467	0.26	-0.0
3,631,107	-		CCNA_03467	0.27	-2.6
3,631,107	-		CCNA_03467	0.27	+0.5
3,631,127	+		CCNA_03467	0.28	+2.5
3,631,127	+		CCNA_03467	0.28	-0.6
3,631,193	-		CCNA_03467	0.30	-0.5
3,631,238	-		CCNA_03467	0.32	+0.8
3,631,238	-		CCNA_03467	0.32	-0.2
3,631,244	+		CCNA_03467	0.32	-0.6
3,631,257	-		CCNA_03467	0.33	-1.2
3,631,281	+		CCNA_03467	0.34	+1.6
3,631,289	-		CCNA_03467	0.34	+1.7
3,631,289	-		CCNA_03467	0.34	-1.8
3,631,322	+		CCNA_03467	0.35	-1.7
3,631,322	+		CCNA_03467	0.35	+0.5
3,631,330	-		CCNA_03467	0.36	-0.7
3,631,330	-		CCNA_03467	0.36	-0.3
3,631,413	+		CCNA_03467	0.39	-1.8
3,631,419	+		CCNA_03467	0.39	-3.3
3,631,421	-		CCNA_03467	0.39	-0.9
3,631,425	+		CCNA_03467	0.40	-0.8
3,631,458	+		CCNA_03467	0.41	+1.6
3,631,458	+		CCNA_03467	0.41	+0.2
3,631,461	+		CCNA_03467	0.41	+0.3
3,631,461	+		CCNA_03467	0.41	-1.7
3,631,461	-		CCNA_03467	0.41	+0.0
3,631,532	-		CCNA_03467	0.44	-0.7
3,631,559	-		CCNA_03467	0.45	+1.0
3,631,563	+		CCNA_03467	0.45	+1.0
3,631,576	-		CCNA_03467	0.46	-1.6
3,631,657	+		CCNA_03467	0.49	-1.0
3,631,665	-		CCNA_03467	0.49	-1.3
3,631,714	+		CCNA_03467	0.51	-1.6
3,631,722	-		CCNA_03467	0.51	-0.2
3,631,841	-		CCNA_03467	0.56	+2.5
3,631,863	-		CCNA_03467	0.57	+0.6
3,631,870	-		CCNA_03467	0.57	-0.7
3,631,870	-		CCNA_03467	0.57	+0.3
3,631,880	-		CCNA_03467	0.58	-1.3
3,631,899	+		CCNA_03467	0.58	+0.5
3,631,899	+		CCNA_03467	0.58	+0.2
3,631,899	+		CCNA_03467	0.58	+0.4
3,631,907	-		CCNA_03467	0.59	-0.0
3,631,907	-				+2.5
3,631,912	-		CCNA_03467	0.59	-1.0
3,631,918	+		CCNA_03467	0.59	-0.2
3,631,945	+		CCNA_03467	0.60	+1.2
3,631,957	+		CCNA_03467	0.61	-0.5
3,631,957	+		CCNA_03467	0.61	-0.6
3,631,965	-		CCNA_03467	0.61	-0.3
3,631,974	+		CCNA_03467	0.61	-1.4
3,631,976	+		CCNA_03467	0.62	+1.8
3,631,987	-		CCNA_03467	0.62	-0.1
3,631,987	-		CCNA_03467	0.62	-1.4
3,631,987	-		CCNA_03467	0.62	-0.9
3,631,987	-		CCNA_03467	0.62	-1.9
3,631,987	-		CCNA_03467	0.62	-1.0
3,631,987	-		CCNA_03467	0.62	-0.3
3,632,007	-		CCNA_03467	0.63	-2.2
3,632,019	+		CCNA_03467	0.63	+0.8
3,632,035	-		CCNA_03467	0.64	-1.7
3,632,037	+		CCNA_03467	0.64	+0.5
3,632,107	-		CCNA_03467	0.67	-1.4
3,632,117	+		CCNA_03467	0.67	-1.2
3,632,138	-		CCNA_03467	0.68	-1.0
3,632,147	-		CCNA_03467	0.68	+0.5
3,632,174	+		CCNA_03467	0.69	-0.3
3,632,185	+		CCNA_03467	0.70	+1.0
3,632,193	-		CCNA_03467	0.70	+1.2
3,632,193	-		CCNA_03467	0.70	-0.7
3,632,204	-		CCNA_03467	0.71	-1.3
3,632,204	-		CCNA_03467	0.71	+1.0
3,632,204	-		CCNA_03467	0.71	-0.8
3,632,233	+		CCNA_03467	0.72	+1.7
3,632,235	-		CCNA_03467	0.72	+0.7
3,632,235	-		CCNA_03467	0.72	+0.2
3,632,235	-		CCNA_03467	0.72	+1.8
3,632,241	-		CCNA_03467	0.72	+1.0
3,632,241	-		CCNA_03467	0.72	-2.0
3,632,241	-		CCNA_03467	0.72	-0.7
3,632,256	-		CCNA_03467	0.73	+0.1
3,632,269	+		CCNA_03467	0.73	-0.4
3,632,269	+		CCNA_03467	0.73	+0.0
3,632,277	-		CCNA_03467	0.74	-1.4
3,632,277	-		CCNA_03467	0.74	+0.3
3,632,297	+		CCNA_03467	0.74	+1.9
3,632,297	+		CCNA_03467	0.74	+1.5
3,632,306	-		CCNA_03467	0.75	-0.3
3,632,321	+		CCNA_03467	0.75	-0.4
3,632,334	+		CCNA_03467	0.76	-0.2
3,632,334	+		CCNA_03467	0.76	+1.3
3,632,342	-		CCNA_03467	0.76	-0.2
3,632,355	+		CCNA_03467	0.77	-0.1
3,632,355	+		CCNA_03467	0.77	+0.3
3,632,355	+		CCNA_03467	0.77	+0.2
3,632,355	+		CCNA_03467	0.77	-0.3
3,632,355	+		CCNA_03467	0.77	+2.2
3,632,355	+		CCNA_03467	0.77	+0.3
3,632,355	+		CCNA_03467	0.77	-1.0
3,632,355	+		CCNA_03467	0.77	+0.5
3,632,355	+		CCNA_03467	0.77	+1.6
3,632,355	+		CCNA_03467	0.77	+0.2
3,632,363	-		CCNA_03467	0.77	-0.5
3,632,363	-		CCNA_03467	0.77	+0.1
3,632,363	-		CCNA_03467	0.77	-0.6
3,632,363	-		CCNA_03467	0.77	+0.5
3,632,363	-		CCNA_03467	0.77	+0.9
3,632,363	-		CCNA_03467	0.77	-1.1
3,632,363	-		CCNA_03467	0.77	+0.3
3,632,363	-		CCNA_03467	0.77	-0.1
3,632,363	-		CCNA_03467	0.77	+0.9
3,632,385	-		CCNA_03467	0.78	+2.0
3,632,401	+		CCNA_03467	0.79	+0.9
3,632,402	+		CCNA_03467	0.79	+0.2
3,632,409	-		CCNA_03467	0.79	-1.4
3,632,420	+		CCNA_03467	0.79	+0.2
3,632,435	+		CCNA_03467	0.80	+0.7
3,632,435	+		CCNA_03467	0.80	-0.1
3,632,456	+		CCNA_03467	0.81	-1.7
3,632,461	+		CCNA_03467	0.81	+0.2
3,632,461	+		CCNA_03467	0.81	+0.7
3,632,469	-		CCNA_03467	0.81	-1.2
3,632,536	-		CCNA_03467	0.84	-1.4
3,632,561	-		CCNA_03467	0.85	+0.4
3,632,591	+		CCNA_03467	0.86	+1.2
3,632,591	+		CCNA_03467	0.86	-0.3
3,632,627	+		CCNA_03467	0.88	+0.2
3,632,627	+		CCNA_03467	0.88	-1.3
3,632,635	-				+1.2
3,632,644	+		CCNA_03467	0.88	-0.5
3,632,652	-		CCNA_03467	0.89	-1.2
3,632,654	+		CCNA_03467	0.89	+0.5
3,632,662	-		CCNA_03467	0.89	-0.1
3,632,662	-		CCNA_03467	0.89	-0.5
3,632,662	-		CCNA_03467	0.89	-1.6
3,632,662	-		CCNA_03467	0.89	-1.2
3,632,662	-		CCNA_03467	0.89	-0.1
3,632,701	+				-1.3
3,632,736	+				+1.2
3,632,750	+				+0.1
3,632,750	+				-1.1
3,632,783	+				+0.3
3,632,783	+				-1.2
3,632,788	+				+1.2
3,632,791	-				+1.2
3,632,794	+				+0.8
3,632,817	+				+0.0
3,632,825	-				+0.2
3,632,825	-				-1.2
3,632,883	+				+0.1
3,632,888	+				+0.1
3,632,891	-				-1.7
3,632,951	-				-0.3
3,633,016	+				-0.8
3,633,076	-				-1.1
3,633,102	+				-1.1
3,633,102	+				-1.9
3,633,102	+				-0.3
3,633,102	+				+1.2
3,633,102	+				+0.6
3,633,102	+				+1.7
3,633,102	+				-1.4
3,633,107	+				-1.0
3,633,110	-				+0.6
3,633,110	-				+0.3
3,633,110	-				+0.5
3,633,110	-				+0.5
3,633,110	-				+0.9
3,633,110	-				+1.0
3,633,110	-				+1.5
3,633,110	-				-0.2
3,633,110	-				-0.8
3,633,110	-				+0.5
3,633,193	+				+3.0
3,633,193	+				-2.0
3,633,193	+				+0.6
3,633,201	-				+0.6
3,633,201	-				+0.6
3,633,206	-				+1.5
3,633,263	+				+3.0
3,633,320	+				+1.7
3,633,352	+		CCNA_03468	0.12	-1.3
3,633,355	-		CCNA_03468	0.12	+1.0
3,633,355	-		CCNA_03468	0.12	+0.3
3,633,369	+		CCNA_03468	0.13	+1.2
3,633,391	-		CCNA_03468	0.14	-0.1
3,633,391	-		CCNA_03468	0.14	+0.3
3,633,419	-		CCNA_03468	0.15	+0.6
3,633,434	-		CCNA_03468	0.16	-2.5
3,633,456	+		CCNA_03468	0.18	-0.8
3,633,458	+		CCNA_03468	0.18	-0.1
3,633,458	+		CCNA_03468	0.18	+1.9
3,633,466	-		CCNA_03468	0.18	-1.0
3,633,466	-		CCNA_03468	0.18	-0.7
3,633,466	-		CCNA_03468	0.18	+0.1
3,633,466	-		CCNA_03468	0.18	+0.9
3,633,486	-		CCNA_03468	0.19	-1.0
3,633,500	-		CCNA_03468	0.20	+1.5
3,633,505	+		CCNA_03468	0.20	+1.9
3,633,511	+		CCNA_03468	0.21	+1.2
3,633,516	+		CCNA_03468	0.21	+0.9
3,633,521	+		CCNA_03468	0.21	-1.0
3,633,521	+		CCNA_03468	0.21	+0.6
3,633,521	+		CCNA_03468	0.21	-1.3
3,633,521	+		CCNA_03468	0.21	-0.4
3,633,521	+		CCNA_03468	0.21	+0.9
3,633,521	+		CCNA_03468	0.21	-0.1
3,633,521	+		CCNA_03468	0.21	-1.1
3,633,521	+		CCNA_03468	0.21	-0.2
3,633,521	+		CCNA_03468	0.21	+0.2
3,633,524	-		CCNA_03468	0.21	-1.4
3,633,524	-		CCNA_03468	0.21	+0.0
3,633,528	+		CCNA_03468	0.22	+0.9
3,633,529	-		CCNA_03468	0.22	-1.1
3,633,529	-		CCNA_03468	0.22	-0.0
3,633,529	-		CCNA_03468	0.22	+0.3
3,633,529	-		CCNA_03468	0.22	-1.2
3,633,529	-		CCNA_03468	0.22	-0.4
3,633,529	-		CCNA_03468	0.22	-0.2
3,633,529	-		CCNA_03468	0.22	-0.8
3,633,558	+		CCNA_03468	0.23	+2.2
3,633,558	+		CCNA_03468	0.23	+0.0
3,633,558	+		CCNA_03468	0.23	+1.2
3,633,616	-		CCNA_03468	0.26	+0.9
3,633,681	+		CCNA_03468	0.30	+1.0
3,633,821	+		CCNA_03468	0.38	-1.3
3,633,826	+		CCNA_03468	0.38	-0.2
3,633,826	+		CCNA_03468	0.38	+1.7
3,633,826	+		CCNA_03468	0.38	+1.0
3,633,851	+		CCNA_03468	0.40	+0.5
3,633,866	-		CCNA_03468	0.40	+2.8
3,633,925	-		CCNA_03468	0.44	-0.3
3,633,925	-		CCNA_03468	0.44	+0.3
3,633,925	-		CCNA_03468	0.44	+1.7
3,633,932	+		CCNA_03468	0.44	-0.4