Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02867

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
3,018,687	+		CCNA_02865	0.72	-1.7
3,018,694	-		CCNA_02865	0.73	+0.9
3,018,709	-		CCNA_02865	0.76	-0.0
3,018,714	-		CCNA_02865	0.76	-0.5
3,018,775	-		CCNA_02865	0.86	+1.2
3,018,785	-		CCNA_02865	0.88	+2.3
3,018,802	-				+1.0
3,018,813	+				-0.5
3,018,821	-				+0.1
3,018,827	-				+0.4
3,018,840	-				-0.1
3,018,909	-				-0.5
3,018,937	+				+0.2
3,018,946	-				+0.6
3,018,967	+				+0.8
3,018,977	+				-0.1
3,018,982	+				+0.6
3,019,031	-				-0.2
3,019,119	-		CCNA_02866	0.23	+0.4
3,019,171	-		CCNA_02866	0.34	-0.5
3,019,171	-		CCNA_02866	0.34	-0.2
3,019,197	+		CCNA_02866	0.40	+0.5
3,019,218	+		CCNA_02866	0.45	+0.0
3,019,218	+		CCNA_02866	0.45	-0.9
3,019,242	+		CCNA_02866	0.50	+0.1
3,019,250	+		CCNA_02866	0.51	+0.4
3,019,271	-		CCNA_02866	0.56	+0.0
3,019,298	+		CCNA_02866	0.62	+0.1
3,019,298	+		CCNA_02866	0.62	+0.1
3,019,301	-		CCNA_02866	0.62	+0.2
3,019,306	-		CCNA_02866	0.63	+0.7
3,019,306	-		CCNA_02866	0.63	-0.2
3,019,306	-		CCNA_02866	0.63	+0.3
3,019,309	+		CCNA_02866	0.64	+1.2
3,019,331	-		CCNA_02866	0.69	-1.0
3,019,373	-		CCNA_02866	0.78	+0.0
3,019,384	+		CCNA_02866	0.80	+0.9
3,019,392	-		CCNA_02866	0.82	-0.8
3,019,410	-		CCNA_02866	0.86	+1.4
3,019,410	-		CCNA_02866	0.86	-0.6
3,019,451	-				-0.2
3,019,456	-				-0.3
3,019,490	-				+0.6
3,019,506	+				-0.4
3,019,506	+				-0.0
3,019,514	-				+0.2
3,019,538	+				+0.9
3,019,538	+				-0.8
3,019,546	-				+0.4
3,019,557	-				+0.6
3,019,557	-				-1.8
3,019,610	+				+0.5
3,019,610	+				-0.7
3,019,618	-				+1.4
3,019,618	-				+0.7
3,019,663	+				+0.0
3,019,663	+				+0.8
3,019,663	+				-1.3
3,019,663	+				+0.6
3,019,663	+				+1.6
3,019,663	+				-0.2
3,019,671	-				-0.2
3,019,671	-				-1.1
3,019,671	-				-0.6
3,019,671	-				-0.6
3,019,671	-				+0.4
3,019,671	-				-0.3
3,019,671	-				+0.2
3,019,682	+				-0.2
3,019,683	+				+1.2
3,019,685	-				-0.5
3,019,688	+				+1.0
3,019,688	+				-1.9
3,019,690	-				+0.9
3,019,696	-				-2.7
3,019,696	-				+0.9
3,019,696	-				-0.4
3,019,714	+		CCNA_02867	0.13	+1.4
3,019,723	-		CCNA_02867	0.15	+0.1
3,019,728	-		CCNA_02867	0.16	-2.3
3,019,728	-		CCNA_02867	0.16	-0.2
3,019,736	+		CCNA_02867	0.17	-1.6
3,019,744	-		CCNA_02867	0.19	-0.1
3,019,813	+		CCNA_02867	0.32	-0.4
3,019,813	+		CCNA_02867	0.32	-1.5
3,019,821	-		CCNA_02867	0.34	-0.8
3,019,821	-		CCNA_02867	0.34	-1.4
3,019,840	-		CCNA_02867	0.38	+0.8
3,019,890	+		CCNA_02867	0.48	-0.0
3,019,890	+		CCNA_02867	0.48	-0.9
3,019,898	-		CCNA_02867	0.49	+0.9
3,019,922	+		CCNA_02867	0.54	-1.3
3,019,943	+		CCNA_02867	0.58	+2.6
3,019,943	+		CCNA_02867	0.58	-0.6
3,019,943	+		CCNA_02867	0.58	+0.6
3,019,951	-		CCNA_02867	0.60	+1.9
3,019,962	+		CCNA_02867	0.62	+0.8
3,019,966	-		CCNA_02867	0.63	-0.3
3,020,000	+		CCNA_02867	0.69	-2.6
3,020,000	+		CCNA_02867	0.69	-1.0
3,020,008	-		CCNA_02867	0.71	+0.0
3,020,009	-		CCNA_02867	0.71	-1.1
3,020,015	-		CCNA_02867	0.72	+0.1
3,020,041	-		CCNA_02867	0.77	-0.8
3,020,041	-		CCNA_02867	0.77	-0.0
3,020,085	-		CCNA_02867	0.86	-1.0
3,020,085	-		CCNA_02867	0.86	+0.3
3,020,085	-		CCNA_02867	0.86	-0.5
3,020,085	-		CCNA_02867	0.86	-0.4
3,020,087	+		CCNA_02867	0.86	+0.3
3,020,087	+		CCNA_02867	0.86	+0.1
3,020,087	+		CCNA_02867	0.86	+0.8
3,020,087	+		CCNA_02867	0.86	-1.4
3,020,087	+		CCNA_02867	0.86	+0.7
3,020,087	+		CCNA_02867	0.86	+0.5
3,020,087	+		CCNA_02867	0.86	+0.8
3,020,095	-		CCNA_02867	0.88	-0.7
3,020,095	-		CCNA_02867	0.88	+2.2
3,020,095	-		CCNA_02867	0.88	-0.0
3,020,095	-		CCNA_02867	0.88	-0.7
3,020,095	-		CCNA_02867	0.88	+0.0
3,020,095	-		CCNA_02867	0.88	-0.2
3,020,095	-		CCNA_02867	0.88	-0.6
3,020,177	-		CCNA_02868	0.14	+1.0
3,020,182	-		CCNA_02868	0.17	-0.1
3,020,190	+		CCNA_02868	0.21	-0.3
3,020,194	+		CCNA_02868	0.23	-0.0
3,020,209	+		CCNA_02868	0.32	+0.2
3,020,217	-		CCNA_02868	0.36	+1.1
3,020,217	-		CCNA_02868	0.36	+1.4
3,020,267	+		CCNA_02868	0.64	+0.3
3,020,275	-		CCNA_02868	0.68	-0.3
3,020,416	+		CCNA_02869	0.31	-0.1
3,020,416	+		CCNA_02869	0.31	-0.6
3,020,424	-		CCNA_02869	0.34	+1.4
3,020,424	-		CCNA_02869	0.34	-1.1
3,020,424	-		CCNA_02869	0.34	-0.3
3,020,455	+		CCNA_02869	0.45	+0.2
3,020,455	+		CCNA_02869	0.45	-0.4
3,020,458	-		CCNA_02869	0.46	+0.6
3,020,460	+		CCNA_02869	0.46	+1.0
3,020,510	-		CCNA_02869	0.64	-0.0
3,020,510	-		CCNA_02869	0.64	+1.4
3,020,515	-		CCNA_02869	0.66	-1.9
3,020,545	-		CCNA_02869	0.76	+0.5
3,020,550	+		CCNA_02869	0.78	-2.0
3,020,570	+		CCNA_02869	0.85	-1.6
3,020,570	+		CCNA_02869	0.85	-0.4
3,020,578	-		CCNA_02869	0.88	+0.3
3,020,596	+				+2.2
3,020,604	-				-0.1
3,020,608	+				+0.8
3,020,610	+				+0.1
3,020,618	+				-0.6
3,020,664	+				+2.0
3,020,677	-				-0.3
3,020,784	-				-0.6
3,020,831	+		CCNA_02870	0.15	+0.7
3,020,874	+		CCNA_02870	0.25	-0.3
3,020,882	-		CCNA_02870	0.27	-2.1
3,020,890	+		CCNA_02870	0.29	+1.0
3,020,890	+		CCNA_02870	0.29	+2.2
3,020,980	-		CCNA_02870	0.51	-0.5
3,021,000	+		CCNA_02870	0.56	+0.4
3,021,000	+		CCNA_02870	0.56	+1.8
3,021,002	-		CCNA_02870	0.56	-0.3
3,021,020	-		CCNA_02870	0.60	+0.4
3,021,037	+				+2.6
3,021,057	+		CCNA_02870	0.69	+1.1
3,021,062	+		CCNA_02870	0.71	+1.5
3,021,070	-		CCNA_02870	0.72	-0.2
3,021,077	-		CCNA_02870	0.74	-1.0
3,021,077	-		CCNA_02870	0.74	+0.7
3,021,090	-		CCNA_02870	0.77	-1.8
3,021,111	-				+4.2