Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02580

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
2,730,231	+		CCNA_02579	0.24	+0.3
2,730,236	+		CCNA_02579	0.24	+0.6
2,730,236	+		CCNA_02579	0.24	-0.8
2,730,236	+		CCNA_02579	0.24	-0.9
2,730,239	-		CCNA_02579	0.24	+1.0
2,730,253	-		CCNA_02579	0.25	+1.2
2,730,325	+		CCNA_02579	0.31	+0.1
2,730,330	+		CCNA_02579	0.31	-0.7
2,730,338	-		CCNA_02579	0.32	-0.4
2,730,383	-		CCNA_02579	0.36	-0.3
2,730,388	+		CCNA_02579	0.36	-1.7
2,730,401	-		CCNA_02579	0.37	-1.1
2,730,418	-		CCNA_02579	0.38	+1.8
2,730,420	+		CCNA_02579	0.39	-0.1
2,730,421	+		CCNA_02579	0.39	-0.3
2,730,428	-		CCNA_02579	0.39	+0.2
2,730,429	-		CCNA_02579	0.39	-0.0
2,730,486	+		CCNA_02579	0.44	+0.1
2,730,490	+		CCNA_02579	0.44	-2.0
2,730,562	+		CCNA_02579	0.50	-1.9
2,730,570	+		CCNA_02579	0.50	-0.3
2,730,601	-		CCNA_02579	0.53	+0.8
2,730,635	+		CCNA_02579	0.55	-0.3
2,730,648	+		CCNA_02579	0.56	+0.4
2,730,654	+		CCNA_02579	0.57	+1.1
2,730,654	+		CCNA_02579	0.57	-0.1
2,730,662	-		CCNA_02579	0.57	-0.7
2,730,662	-		CCNA_02579	0.57	+0.3
2,730,662	-		CCNA_02579	0.57	-0.4
2,730,678	+				+1.8
2,730,693	-		CCNA_02579	0.60	+0.6
2,730,695	+		CCNA_02579	0.60	-0.6
2,730,725	+		CCNA_02579	0.62	+1.1
2,730,733	-		CCNA_02579	0.63	+0.8
2,730,735	+		CCNA_02579	0.63	+0.8
2,730,741	-		CCNA_02579	0.64	-0.1
2,730,773	+		CCNA_02579	0.66	-0.3
2,730,792	+		CCNA_02579	0.68	+0.9
2,730,792	+		CCNA_02579	0.68	+2.1
2,730,792	+		CCNA_02579	0.68	-0.7
2,730,792	+		CCNA_02579	0.68	-0.2
2,730,792	+		CCNA_02579	0.68	-0.1
2,730,792	+		CCNA_02579	0.68	+1.1
2,730,792	+		CCNA_02579	0.68	+1.2
2,730,792	+		CCNA_02579	0.68	+0.7
2,730,792	+		CCNA_02579	0.68	+1.1
2,730,792	+		CCNA_02579	0.68	-0.1
2,730,797	+		CCNA_02579	0.68	+0.4
2,730,800	-		CCNA_02579	0.68	-0.5
2,730,800	-		CCNA_02579	0.68	+0.9
2,730,800	-		CCNA_02579	0.68	-1.1
2,730,800	-		CCNA_02579	0.68	-1.8
2,730,800	-		CCNA_02579	0.68	+0.4
2,730,800	-		CCNA_02579	0.68	-0.3
2,730,800	-		CCNA_02579	0.68	-1.8
2,730,800	-		CCNA_02579	0.68	-0.7
2,730,800	-		CCNA_02579	0.68	-1.2
2,730,828	-		CCNA_02579	0.71	+0.2
2,730,853	+		CCNA_02579	0.72	+0.1
2,730,853	+		CCNA_02579	0.72	-0.1
2,730,853	-		CCNA_02579	0.72	-1.1
2,730,895	-		CCNA_02579	0.76	-0.4
2,730,926	+		CCNA_02579	0.78	+1.8
2,730,926	+		CCNA_02579	0.78	-0.6
2,730,931	+		CCNA_02579	0.79	-0.5
2,730,934	-		CCNA_02579	0.79	-1.5
2,730,934	-		CCNA_02579	0.79	+2.1
2,730,934	-		CCNA_02579	0.79	-0.0
2,730,936	+		CCNA_02579	0.79	+1.4
2,730,936	+		CCNA_02579	0.79	-0.4
2,730,944	-		CCNA_02579	0.80	+1.1
2,730,944	-		CCNA_02579	0.80	+0.4
2,730,944	-		CCNA_02579	0.80	+1.0
2,730,944	-		CCNA_02579	0.80	+1.5
2,730,944	-		CCNA_02579	0.80	+0.5
2,730,944	-		CCNA_02579	0.80	+0.3
2,730,944	-		CCNA_02579	0.80	-0.5
2,730,978	+		CCNA_02579	0.82	-0.3
2,731,041	+		CCNA_02579	0.87	+1.0
2,731,041	+		CCNA_02579	0.87	+2.1
2,731,041	+		CCNA_02579	0.87	+0.4
2,731,044	-		CCNA_02579	0.87	-0.1
2,731,046	+		CCNA_02579	0.88	-0.0
2,731,046	+		CCNA_02579	0.88	-0.3
2,731,049	-		CCNA_02579	0.88	+0.8
2,731,051	+		CCNA_02579	0.88	-0.4
2,731,059	-		CCNA_02579	0.89	+1.0
2,731,059	-		CCNA_02579	0.89	+0.1
2,731,059	-		CCNA_02579	0.89	-1.2
2,731,073	+		CCNA_02579	0.90	-0.5
2,731,106	+				-1.9
2,731,120	+				+1.4
2,731,218	+				+0.5
2,731,227	+				-0.3
2,731,235	-		CCNA_02580	0.12	-0.6
2,731,256	+		CCNA_02580	0.23	-0.2
2,731,274	+		CCNA_02580	0.33	-0.0
2,731,293	-		CCNA_02580	0.44	-1.3
2,731,334	+		CCNA_02580	0.67	+0.8
2,731,334	+		CCNA_02580	0.67	-0.0
2,731,334	+		CCNA_02580	0.67	+1.3
2,731,339	+		CCNA_02580	0.69	-1.1
2,731,372	+		CCNA_02580	0.88	-0.3
2,731,411	-				+2.1
2,731,429	+				+0.4
2,731,449	+				-1.1
2,731,467	-				-0.2
2,731,474	+				-0.1
2,731,474	+				-0.8
2,731,475	-				+0.2
2,731,508	+				+0.4
2,731,508	+				+0.3
2,731,508	+				-0.2
2,731,516	-				-1.3
2,731,516	-				-0.4
2,731,520	+				+1.8
2,731,523	+				+1.5
2,731,525	+				-0.2
2,731,533	-				-0.5
2,731,533	-				-0.9
2,731,551	+				+0.3
2,731,665	-				-0.1
2,731,674	+				+0.7
2,731,698	+				+0.9
2,731,698	+				-0.4
2,731,730	+				+2.1
2,731,730	+				-1.0
2,731,738	-				+1.1
2,731,738	-				-1.5
2,731,738	-				-0.0
2,731,738	-				+1.5
2,731,738	-				+1.3
2,731,745	+				-0.8
2,731,745	+				-1.4
2,731,745	+				-0.1
2,731,781	-		CCNA_02581	0.16	+0.4
2,731,821	+		CCNA_02581	0.24	-0.7
2,731,830	+		CCNA_02581	0.26	-0.7
2,731,854	-		CCNA_02581	0.31	-1.4
2,731,872	+		CCNA_02581	0.35	+0.6
2,731,967	+		CCNA_02581	0.54	+0.4
2,731,967	+		CCNA_02581	0.54	-0.6
2,732,012	+		CCNA_02581	0.63	-1.2
2,732,020	-		CCNA_02581	0.65	+0.3
2,732,023	-		CCNA_02581	0.66	+0.9
2,732,025	+		CCNA_02581	0.66	+0.3
2,732,027	+		CCNA_02581	0.66	-0.2
2,732,056	+		CCNA_02581	0.72	-1.5
2,732,056	+		CCNA_02581	0.72	+1.9
2,732,056	+		CCNA_02581	0.72	-1.6
2,732,087	+		CCNA_02581	0.79	+1.9
2,732,122	+		CCNA_02581	0.86	-0.4
2,732,177	-				-0.6
2,732,182	-				+0.7
2,732,183	+				-0.7
2,732,224	-		CCNA_02582	0.33	-2.7
2,732,253	+		CCNA_02582	0.52	+0.2
2,732,261	-		CCNA_02582	0.58	+0.4
2,732,268	+		CCNA_02582	0.63	-0.4
2,732,268	+		CCNA_02582	0.63	+1.1
2,732,273	+		CCNA_02582	0.66	+1.8
2,732,348	+				-1.0
2,732,348	+				-1.0
2,732,356	-				-1.6
2,732,371	+				-0.0
2,732,371	+				-0.1