Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01706

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
1,836,761	-				-0.2
1,836,794	-				-0.1
1,836,810	+		CCNA_01705	0.11	+0.6
1,836,829	+		CCNA_01705	0.13	+1.0
1,836,829	+		CCNA_01705	0.13	-0.3
1,836,830	+		CCNA_01705	0.13	+1.2
1,836,830	+		CCNA_01705	0.13	+0.7
1,836,830	+		CCNA_01705	0.13	+0.4
1,836,830	+		CCNA_01705	0.13	+1.0
1,836,835	+		CCNA_01705	0.13	+1.0
1,836,838	-		CCNA_01705	0.14	-1.5
1,836,843	-		CCNA_01705	0.14	+0.6
1,836,855	-		CCNA_01705	0.16	-0.2
1,836,874	-		CCNA_01705	0.18	-0.2
1,836,941	+		CCNA_01705	0.26	-1.5
1,836,942	+		CCNA_01705	0.26	+2.2
1,836,942	+		CCNA_01705	0.26	+0.5
1,836,942	+		CCNA_01705	0.26	+1.4
1,836,949	-		CCNA_01705	0.27	-0.3
1,836,949	-		CCNA_01705	0.27	-1.9
1,837,010	+		CCNA_01705	0.34	-0.6
1,837,011	+		CCNA_01705	0.34	+0.7
1,837,018	-		CCNA_01705	0.35	-0.3
1,837,081	+		CCNA_01705	0.43	-0.6
1,837,101	+		CCNA_01705	0.45	-0.1
1,837,101	+		CCNA_01705	0.45	+1.0
1,837,121	+		CCNA_01705	0.47	-0.7
1,837,139	+		CCNA_01705	0.49	-0.7
1,837,217	+		CCNA_01705	0.59	-0.4
1,837,264	-		CCNA_01705	0.64	-0.6
1,837,271	+		CCNA_01705	0.65	+0.7
1,837,362	-		CCNA_01705	0.76	+1.9
1,837,392	-		CCNA_01705	0.79	+0.6
1,837,400	+		CCNA_01705	0.80	+0.1
1,837,408	-		CCNA_01705	0.81	+2.1
1,837,448	+		CCNA_01705	0.86	-0.3
1,837,448	+		CCNA_01705	0.86	-1.2
1,837,506	+				-0.6
1,837,506	+				-1.1
1,837,511	+				-0.4
1,837,525	-				+0.5
1,837,541	-				-0.5
1,837,541	-				+0.4
1,837,546	-				-1.1
1,837,552	-				-0.5
1,837,566	-				+1.5
1,837,611	-				-0.9
1,837,676	-				+0.1
1,837,698	-				+1.2
1,837,698	-				+0.5
1,837,698	-				+0.1
1,837,755	+				+1.2
1,837,763	-				-1.3
1,837,851	+				+0.6
1,837,851	+				-0.3
1,837,861	+				-0.6
1,837,874	-				+2.2
1,837,896	+		CCNA_01706	0.10	-1.1
1,837,929	-		CCNA_01706	0.12	-1.4
1,837,954	+		CCNA_01706	0.14	+0.5
1,837,954	+		CCNA_01706	0.14	-1.2
1,837,954	+		CCNA_01706	0.14	-0.1
1,837,961	+		CCNA_01706	0.14	+0.5
1,837,961	-		CCNA_01706	0.14	+0.7
1,837,962	-		CCNA_01706	0.14	+1.2
1,837,962	-		CCNA_01706	0.14	-2.3
1,837,962	-		CCNA_01706	0.14	-1.2
1,837,962	-		CCNA_01706	0.14	-0.9
1,837,969	-		CCNA_01706	0.14	-0.3
1,837,991	+		CCNA_01706	0.16	-0.0
1,837,991	+		CCNA_01706	0.16	+0.2
1,837,997	+		CCNA_01706	0.16	-0.9
1,838,029	+		CCNA_01706	0.18	-1.0
1,838,029	+		CCNA_01706	0.18	-0.4
1,838,029	+		CCNA_01706	0.18	-0.6
1,838,029	+		CCNA_01706	0.18	+3.2
1,838,029	+				+1.8
1,838,029	+		CCNA_01706	0.18	-0.8
1,838,037	-		CCNA_01706	0.18	+0.6
1,838,037	-		CCNA_01706	0.18	-1.4
1,838,037	-		CCNA_01706	0.18	+0.4
1,838,037	-		CCNA_01706	0.18	+1.8
1,838,037	-		CCNA_01706	0.18	-0.0
1,838,037	-		CCNA_01706	0.18	-2.2
1,838,037	-		CCNA_01706	0.18	+1.2
1,838,039	+		CCNA_01706	0.18	-1.0
1,838,042	-		CCNA_01706	0.19	-1.7
1,838,062	-		CCNA_01706	0.20	-1.0
1,838,207	-		CCNA_01706	0.28	-2.0
1,838,207	-		CCNA_01706	0.28	+0.0
1,838,239	+		CCNA_01706	0.30	-0.7
1,838,239	+		CCNA_01706	0.30	+1.4
1,838,247	-		CCNA_01706	0.30	+0.7
1,838,247	-		CCNA_01706	0.30	-1.2
1,838,247	-		CCNA_01706	0.30	+1.4
1,838,268	+		CCNA_01706	0.32	+2.9
1,838,268	+		CCNA_01706	0.32	+1.0
1,838,268	+		CCNA_01706	0.32	-0.2
1,838,288	+		CCNA_01706	0.33	-1.7
1,838,288	+		CCNA_01706	0.33	+0.5
1,838,296	-		CCNA_01706	0.33	+0.8
1,838,337	+		CCNA_01706	0.36	-0.2
1,838,337	+		CCNA_01706	0.36	-0.2
1,838,345	-				+1.8
1,838,407	+		CCNA_01706	0.40	+1.2
1,838,415	+		CCNA_01706	0.40	+0.2
1,838,487	+		CCNA_01706	0.44	-1.3
1,838,495	-		CCNA_01706	0.45	+0.3
1,838,551	+		CCNA_01706	0.48	-0.7
1,838,551	+		CCNA_01706	0.48	+0.4
1,838,553	+		CCNA_01706	0.48	-1.3
1,838,553	+		CCNA_01706	0.48	+0.2
1,838,559	-		CCNA_01706	0.48	+2.2
1,838,559	-		CCNA_01706	0.48	+0.5
1,838,561	-		CCNA_01706	0.48	-0.6
1,838,583	-		CCNA_01706	0.50	-0.4
1,838,633	+		CCNA_01706	0.53	-0.9
1,838,657	+		CCNA_01706	0.54	-1.5
1,838,657	+		CCNA_01706	0.54	+0.7
1,838,657	+		CCNA_01706	0.54	+0.1
1,838,657	+		CCNA_01706	0.54	+1.4
1,838,665	-		CCNA_01706	0.54	+2.2
1,838,665	-		CCNA_01706	0.54	+0.4
1,838,667	-		CCNA_01706	0.55	+0.4
1,838,669	+		CCNA_01706	0.55	-0.1
1,838,711	+		CCNA_01706	0.57	+0.4
1,838,745	+		CCNA_01706	0.59	+0.5
1,838,809	-		CCNA_01706	0.63	-0.4
1,838,874	+		CCNA_01706	0.66	+1.8
1,838,897	-		CCNA_01706	0.68	-1.8
1,838,930	+		CCNA_01706	0.70	-2.0
1,838,985	-		CCNA_01706	0.73	+2.7
1,838,996	-		CCNA_01706	0.73	-0.2
1,839,051	-		CCNA_01706	0.77	-1.9
1,839,051	-		CCNA_01706	0.77	+2.4
1,839,065	+		CCNA_01706	0.77	+0.1
1,839,065	+		CCNA_01706	0.77	-0.2
1,839,065	+		CCNA_01706	0.77	-0.5
1,839,073	-		CCNA_01706	0.78	+1.6
1,839,119	-		CCNA_01706	0.81	+0.8
1,839,148	+		CCNA_01706	0.82	-0.6
1,839,181	+		CCNA_01706	0.84	-0.9
1,839,196	+		CCNA_01706	0.85	-1.4
1,839,196	+		CCNA_01706	0.85	-1.5
1,839,196	+		CCNA_01706	0.85	+0.4
1,839,280	+		CCNA_01706	0.90	-1.5
1,839,280	+		CCNA_01706	0.90	-1.5
1,839,280	+		CCNA_01706	0.90	-1.2
1,839,281	+		CCNA_01706	0.90	-0.6
1,839,307	+				-1.1
1,839,322	-				+0.8
1,839,359	+				-0.2
1,839,378	+				-0.2
1,839,391	-				+2.4
1,839,420	+				-0.9
1,839,436	-				-0.8
1,839,452	+				-0.3
1,839,460	-				+1.4
1,839,460	-				+1.2
1,839,460	-				-0.7
1,839,498	-				-1.0
1,839,530	-		CCNA_01707	0.13	+0.2
1,839,575	+		CCNA_01707	0.21	+0.7
1,839,585	+		CCNA_01707	0.23	+0.6
1,839,593	-		CCNA_01707	0.25	+1.0
1,839,593	-		CCNA_01707	0.25	-0.6
1,839,615	+		CCNA_01707	0.29	+1.3
1,839,727	+		CCNA_01707	0.49	-0.2
1,839,750	+		CCNA_01707	0.53	+0.2
1,839,801	-		CCNA_01707	0.63	+1.1
1,839,875	-		CCNA_01707	0.76	+1.6
1,839,919	-		CCNA_01707	0.84	+0.1
1,839,949	-		CCNA_01707	0.90	-0.4
1,839,954	+				-2.1
1,840,043	+				+1.9
1,840,058	+				-0.7
1,840,058	+				+0.6
1,840,058	+				-0.8
1,840,070	-				+0.4
1,840,099	+				-0.2
1,840,168	+		CCNA_01708	0.11	-0.8
1,840,198	-		CCNA_01708	0.16	+1.2
1,840,199	-		CCNA_01708	0.16	+0.6
1,840,240	+		CCNA_01708	0.24	-1.7
1,840,245	+		CCNA_01708	0.24	+0.5
1,840,245	+		CCNA_01708	0.24	+0.4
1,840,334	-		CCNA_01708	0.41	+0.7
1,840,334	-		CCNA_01708	0.41	+0.1
1,840,358	+		CCNA_01708	0.45	-1.2
1,840,403	+		CCNA_01708	0.53	-1.3
1,840,404	+		CCNA_01708	0.53	-0.5
1,840,432	+		CCNA_01708	0.58	+1.0
1,840,437	+		CCNA_01708	0.59	-1.2
1,840,440	-		CCNA_01708	0.60	+0.4