Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01388

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
1,504,193	+		CCNA_01387	0.21	+1.1
1,504,193	+		CCNA_01387	0.21	-1.1
1,504,201	-		CCNA_01387	0.22	+0.9
1,504,206	-		CCNA_01387	0.22	-2.0
1,504,243	-		CCNA_01387	0.25	+0.6
1,504,244	-		CCNA_01387	0.25	+0.0
1,504,276	-		CCNA_01387	0.28	+2.5
1,504,286	-		CCNA_01387	0.29	-1.2
1,504,359	+		CCNA_01387	0.34	-0.5
1,504,460	+		CCNA_01387	0.42	-1.1
1,504,545	+		CCNA_01387	0.49	+0.2
1,504,596	-		CCNA_01387	0.53	+0.8
1,504,610	+		CCNA_01387	0.54	-0.3
1,504,610	+		CCNA_01387	0.54	+1.1
1,504,610	+		CCNA_01387	0.54	-0.6
1,504,634	+		CCNA_01387	0.56	-0.9
1,504,634	+		CCNA_01387	0.56	+0.1
1,504,639	+		CCNA_01387	0.57	-1.7
1,504,639	+		CCNA_01387	0.57	+1.1
1,504,639	+		CCNA_01387	0.57	+0.3
1,504,653	+		CCNA_01387	0.58	-0.6
1,504,653	+		CCNA_01387	0.58	-0.1
1,504,662	-		CCNA_01387	0.59	+0.4
1,504,667	+		CCNA_01387	0.59	+0.1
1,504,686	+		CCNA_01387	0.61	-1.0
1,504,706	+		CCNA_01387	0.62	+0.1
1,504,729	-		CCNA_01387	0.64	+1.4
1,504,741	-		CCNA_01387	0.65	+0.4
1,504,742	-		CCNA_01387	0.65	+1.1
1,504,780	+		CCNA_01387	0.68	+0.8
1,504,788	-		CCNA_01387	0.69	+1.5
1,504,804	-		CCNA_01387	0.70	-0.9
1,504,806	+		CCNA_01387	0.70	-1.7
1,504,811	+		CCNA_01387	0.71	+0.4
1,504,811	+		CCNA_01387	0.71	+0.3
1,504,811	+		CCNA_01387	0.71	-0.6
1,504,811	+		CCNA_01387	0.71	-0.1
1,504,811	+		CCNA_01387	0.71	-3.0
1,504,811	+		CCNA_01387	0.71	-0.2
1,504,811	+		CCNA_01387	0.71	+0.1
1,504,813	-		CCNA_01387	0.71	+1.2
1,504,814	-		CCNA_01387	0.71	+0.9
1,504,814	-		CCNA_01387	0.71	-0.1
1,504,819	+		CCNA_01387	0.71	-0.4
1,504,819	-		CCNA_01387	0.71	+0.4
1,504,819	-		CCNA_01387	0.71	+1.3
1,504,819	-		CCNA_01387	0.71	+0.4
1,504,819	-		CCNA_01387	0.71	-1.0
1,504,821	+		CCNA_01387	0.71	-0.7
1,504,826	+		CCNA_01387	0.72	+1.7
1,504,826	+		CCNA_01387	0.72	-1.8
1,504,834	-		CCNA_01387	0.72	-1.1
1,504,846	-		CCNA_01387	0.73	+0.2
1,504,887	-		CCNA_01387	0.77	-0.8
1,504,894	+		CCNA_01387	0.77	-0.5
1,504,911	+		CCNA_01387	0.79	-1.0
1,504,919	-		CCNA_01387	0.79	+0.2
1,504,921	+		CCNA_01387	0.79	-0.1
1,504,921	+		CCNA_01387	0.79	-1.8
1,504,921	+		CCNA_01387	0.79	+0.5
1,504,926	+		CCNA_01387	0.80	-0.1
1,504,926	+		CCNA_01387	0.80	-0.5
1,504,928	+		CCNA_01387	0.80	+0.4
1,504,928	+		CCNA_01387	0.80	+0.2
1,504,929	-		CCNA_01387	0.80	-0.5
1,504,929	-		CCNA_01387	0.80	+0.9
1,504,936	-		CCNA_01387	0.81	-0.7
1,504,943	+		CCNA_01387	0.81	-0.2
1,504,943	+		CCNA_01387	0.81	+0.3
1,504,943	+		CCNA_01387	0.81	+0.2
1,504,951	-		CCNA_01387	0.82	+0.7
1,504,951	-		CCNA_01387	0.82	-0.5
1,504,951	-		CCNA_01387	0.82	-0.7
1,504,951	-		CCNA_01387	0.82	-0.4
1,504,957	-		CCNA_01387	0.82	+1.3
1,505,013	-		CCNA_01387	0.87	-0.1
1,505,015	+		CCNA_01387	0.87	+0.5
1,505,015	+		CCNA_01387	0.87	-0.6
1,505,015	+		CCNA_01387	0.87	-0.2
1,505,023	-		CCNA_01387	0.88	+0.1
1,505,023	-		CCNA_01387	0.88	+1.5
1,505,023	-		CCNA_01387	0.88	+0.0
1,505,031	+		CCNA_01387	0.88	-0.4
1,505,052	+		CCNA_01387	0.90	-0.4
1,505,052	+		CCNA_01387	0.90	-1.0
1,505,060	-				-0.5
1,505,138	-				+0.5
1,505,154	-				+0.3
1,505,154	-				+1.6
1,505,154	-				-0.1
1,505,163	+				-0.8
1,505,171	-				+0.4
1,505,187	+				+0.3
1,505,195	-				+0.6
1,505,213	-				+0.7
1,505,225	-				-0.2
1,505,243	+				-0.8
1,505,258	+				+0.3
1,505,280	+				-0.2
1,505,372	-		CCNA_01388	0.18	-0.5
1,505,389	+		CCNA_01388	0.19	+0.5
1,505,397	-		CCNA_01388	0.20	-0.7
1,505,435	+		CCNA_01388	0.24	+0.5
1,505,480	+		CCNA_01388	0.28	+0.4
1,505,480	+		CCNA_01388	0.28	-1.1
1,505,560	-		CCNA_01388	0.35	-0.5
1,505,563	-		CCNA_01388	0.35	+2.1
1,505,589	-		CCNA_01388	0.38	+0.5
1,505,663	+		CCNA_01388	0.45	-0.0
1,505,671	-		CCNA_01388	0.46	+0.4
1,505,737	-		CCNA_01388	0.52	-0.6
1,505,757	+		CCNA_01388	0.54	-1.6
1,505,764	+		CCNA_01388	0.54	-0.5
1,505,790	-		CCNA_01388	0.57	-2.2
1,505,802	+		CCNA_01388	0.58	-0.1
1,505,810	-		CCNA_01388	0.59	-0.8
1,505,903	+		CCNA_01388	0.67	+1.5
1,505,903	+		CCNA_01388	0.67	-0.5
1,505,909	+		CCNA_01388	0.68	-1.2
1,505,917	-		CCNA_01388	0.69	-1.4
1,505,940	-		CCNA_01388	0.71	+0.7
1,505,954	-		CCNA_01388	0.72	+1.1
1,505,958	+		CCNA_01388	0.72	-0.2
1,506,024	+		CCNA_01388	0.79	-1.3
1,506,031	-		CCNA_01388	0.79	-1.2
1,506,078	+		CCNA_01388	0.84	+0.6
1,506,126	+		CCNA_01388	0.88	+0.2
1,506,152	-				-0.0
1,506,180	+				-0.2
1,506,200	+				+0.3
1,506,215	+				-2.7
1,506,215	+				-0.1
1,506,215	+				-0.2
1,506,223	-				-0.0
1,506,286	-				+0.9
1,506,332	+				+0.0
1,506,339	+				-0.3
1,506,367	+				+0.8
1,506,413	-		CCNA_01389	0.11	+0.7
1,506,430	+		CCNA_01389	0.13	+0.4
1,506,474	-		CCNA_01389	0.17	+2.0
1,506,484	+		CCNA_01389	0.18	-0.7
1,506,539	+		CCNA_01389	0.24	+0.1
1,506,588	+		CCNA_01389	0.28	-0.1
1,506,596	-		CCNA_01389	0.29	+0.9
1,506,621	+		CCNA_01389	0.32	-1.4
1,506,626	+		CCNA_01389	0.32	-0.4
1,506,769	+		CCNA_01389	0.46	-0.7
1,506,782	-		CCNA_01389	0.48	-2.9
1,506,806	+		CCNA_01389	0.50	-1.7
1,506,814	-		CCNA_01389	0.51	+0.0
1,506,814	-		CCNA_01389	0.51	+0.6
1,506,834	+		CCNA_01389	0.53	-0.8
1,506,921	+		CCNA_01389	0.61	-0.7
1,506,935	+		CCNA_01389	0.63	-1.1
1,506,950	+		CCNA_01389	0.64	+1.7
1,506,976	-		CCNA_01389	0.67	+1.6
1,506,983	+		CCNA_01389	0.67	-1.6
1,506,983	+		CCNA_01389	0.67	-0.9
1,506,983	+		CCNA_01389	0.67	+0.7
1,507,002	+		CCNA_01389	0.69	-0.8
1,507,002	+		CCNA_01389	0.69	-0.4
1,507,015	-		CCNA_01389	0.71	-0.6
1,507,015	-		CCNA_01389	0.71	-0.5
1,507,022	-		CCNA_01389	0.71	+1.1
1,507,034	-		CCNA_01389	0.72	-0.5
1,507,056	+		CCNA_01389	0.75	+1.6
1,507,073	-		CCNA_01389	0.76	+0.3
1,507,077	+		CCNA_01389	0.77	-0.4
1,507,100	-		CCNA_01389	0.79	-0.9
1,507,137	+		CCNA_01389	0.83	-0.1
1,507,141	-		CCNA_01389	0.83	+1.0
1,507,142	+		CCNA_01389	0.83	-0.2
1,507,150	-		CCNA_01389	0.84	-0.7
1,507,171	-		CCNA_01389	0.86	-0.7
1,507,222	+				+0.3
1,507,246	+				+0.4
1,507,246	+				-0.3
1,507,246	+				+0.9
1,507,246	+				-1.5