Experiment: sodium fluoride 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1953 and Ac3H11_1954 are separated by 178 nucleotides Ac3H11_1954 and Ac3H11_1955 are separated by 119 nucleotides
Ac3H11_1953 - Transcriptional regulator, at 166,449 to 167,381
_1953
Ac3H11_1954 - Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4), at 167,560 to 168,459
_1954
Ac3H11_1955 - Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4), at 168,579 to 169,478
_1955
Position (kb) 167
168
169 Strain fitness (log2 ratio) -2
-1
0
1
2 at 166.641 kb on + strand, within Ac3H11_1953 at 166.641 kb on + strand, within Ac3H11_1953 at 166.887 kb on + strand, within Ac3H11_1953 at 166.929 kb on + strand, within Ac3H11_1953 at 166.930 kb on - strand, within Ac3H11_1953 at 167.353 kb on - strand at 167.353 kb on - strand at 167.379 kb on + strand at 167.397 kb on + strand at 167.397 kb on + strand at 167.410 kb on + strand at 167.410 kb on + strand at 167.410 kb on + strand at 167.410 kb on + strand at 167.410 kb on + strand at 167.442 kb on + strand at 167.443 kb on - strand at 167.443 kb on - strand at 167.443 kb on - strand at 167.445 kb on + strand at 167.445 kb on + strand at 167.445 kb on + strand at 167.445 kb on + strand at 167.446 kb on - strand at 167.446 kb on - strand at 167.446 kb on - strand at 167.446 kb on - strand at 167.455 kb on + strand at 167.455 kb on + strand at 167.455 kb on + strand at 167.455 kb on + strand at 167.455 kb on + strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.456 kb on - strand at 167.559 kb on + strand at 167.560 kb on - strand at 167.587 kb on - strand at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.710 kb on + strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.711 kb on - strand, within Ac3H11_1954 at 167.743 kb on + strand, within Ac3H11_1954 at 168.027 kb on + strand, within Ac3H11_1954 at 168.027 kb on + strand, within Ac3H11_1954 at 168.028 kb on - strand at 168.178 kb on + strand, within Ac3H11_1954 at 168.178 kb on + strand, within Ac3H11_1954 at 168.178 kb on + strand, within Ac3H11_1954 at 168.178 kb on + strand, within Ac3H11_1954 at 168.179 kb on - strand at 168.179 kb on - strand, within Ac3H11_1954 at 168.179 kb on - strand, within Ac3H11_1954 at 168.333 kb on + strand, within Ac3H11_1954 at 168.333 kb on + strand, within Ac3H11_1954 at 168.334 kb on - strand, within Ac3H11_1954 at 168.334 kb on - strand, within Ac3H11_1954 at 168.337 kb on + strand, within Ac3H11_1954 at 168.337 kb on + strand, within Ac3H11_1954 at 168.337 kb on + strand, within Ac3H11_1954 at 168.338 kb on - strand at 168.338 kb on - strand, within Ac3H11_1954 at 168.338 kb on - strand, within Ac3H11_1954 at 168.346 kb on + strand, within Ac3H11_1954 at 168.346 kb on + strand, within Ac3H11_1954 at 168.346 kb on + strand, within Ac3H11_1954 at 168.346 kb on + strand, within Ac3H11_1954 at 168.347 kb on - strand at 168.347 kb on - strand, within Ac3H11_1954 at 168.347 kb on - strand, within Ac3H11_1954 at 168.347 kb on - strand, within Ac3H11_1954 at 168.409 kb on + strand at 168.409 kb on + strand at 168.409 kb on + strand at 168.410 kb on - strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.433 kb on + strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.434 kb on - strand at 168.438 kb on + strand at 168.438 kb on + strand at 168.461 kb on + strand at 168.464 kb on + strand at 168.464 kb on + strand at 168.465 kb on - strand at 168.465 kb on - strand at 168.475 kb on - strand at 168.486 kb on + strand at 168.486 kb on + strand at 168.487 kb on - strand at 168.492 kb on + strand at 168.492 kb on + strand at 168.492 kb on + strand at 168.492 kb on + strand at 168.493 kb on - strand at 168.493 kb on - strand at 168.536 kb on - strand at 168.536 kb on - strand at 168.536 kb on - strand at 168.579 kb on - strand at 168.718 kb on - strand, within Ac3H11_1955 at 168.738 kb on + strand, within Ac3H11_1955 at 168.738 kb on + strand at 168.738 kb on + strand, within Ac3H11_1955 at 168.738 kb on + strand at 168.739 kb on - strand at 168.739 kb on - strand, within Ac3H11_1955 at 168.739 kb on - strand, within Ac3H11_1955 at 168.739 kb on - strand, within Ac3H11_1955 at 168.822 kb on + strand, within Ac3H11_1955 at 168.822 kb on + strand, within Ac3H11_1955 at 168.823 kb on - strand, within Ac3H11_1955 at 168.823 kb on - strand, within Ac3H11_1955 at 168.823 kb on - strand at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.945 kb on + strand, within Ac3H11_1955 at 168.946 kb on - strand, within Ac3H11_1955 at 168.946 kb on - strand at 168.946 kb on - strand, within Ac3H11_1955 at 169.218 kb on + strand, within Ac3H11_1955 at 169.218 kb on + strand at 169.219 kb on - strand, within Ac3H11_1955 at 169.219 kb on - strand at 169.219 kb on - strand, within Ac3H11_1955 at 169.219 kb on - strand, within Ac3H11_1955 at 169.219 kb on - strand, within Ac3H11_1955 at 169.350 kb on + strand, within Ac3H11_1955 at 169.350 kb on + strand at 169.350 kb on + strand, within Ac3H11_1955 at 169.351 kb on - strand, within Ac3H11_1955
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 50 mM remove 166,641 + Ac3H11_1953 0.21 -1.7 166,641 + Ac3H11_1953 0.21 -1.8 166,887 + Ac3H11_1953 0.47 -1.6 166,929 + Ac3H11_1953 0.51 -0.8 166,930 - Ac3H11_1953 0.52 -0.4 167,353 - +0.3 167,353 - +0.3 167,379 + -0.4 167,397 + +0.2 167,397 + +0.8 167,410 + -0.2 167,410 + +0.3 167,410 + +0.4 167,410 + -0.0 167,410 + +0.0 167,442 + -0.2 167,443 - +0.9 167,443 - -1.6 167,443 - +0.6 167,445 + +0.4 167,445 + +1.0 167,445 + -0.2 167,445 + +1.1 167,446 - -1.4 167,446 - +0.3 167,446 - -1.3 167,446 - +0.3 167,455 + +0.3 167,455 + -0.7 167,455 + -0.0 167,455 + +0.4 167,455 + +0.1 167,456 - +1.1 167,456 - -0.7 167,456 - -0.7 167,456 - +0.3 167,456 - -0.1 167,456 - +0.7 167,456 - -0.1 167,456 - +0.9 167,456 - -0.9 167,456 - +1.0 167,456 - +1.2 167,456 - +0.9 167,456 - -1.1 167,559 + +0.8 167,560 - +0.1 167,587 - -1.0 167,710 + Ac3H11_1954 0.17 -0.0 167,710 + Ac3H11_1954 0.17 +0.6 167,710 + Ac3H11_1954 0.17 -0.6 167,710 + Ac3H11_1954 0.17 -1.0 167,710 + Ac3H11_1954 0.17 -0.3 167,710 + Ac3H11_1954 0.17 -1.9 167,710 + Ac3H11_1954 0.17 +0.2 167,711 - Ac3H11_1954 0.17 +0.7 167,711 - Ac3H11_1954 0.17 -1.3 167,711 - Ac3H11_1954 0.17 +0.9 167,711 - Ac3H11_1954 0.17 -1.4 167,711 - Ac3H11_1954 0.17 -0.1 167,711 - Ac3H11_1954 0.17 +1.7 167,711 - Ac3H11_1954 0.17 +0.0 167,711 - Ac3H11_1954 0.17 -0.2 167,711 - Ac3H11_1954 0.17 -1.7 167,711 - Ac3H11_1954 0.17 +0.6 167,743 + Ac3H11_1954 0.20 -0.1 168,027 + Ac3H11_1954 0.52 -0.7 168,027 + Ac3H11_1954 0.52 -0.8 168,028 - +1.9 168,178 + Ac3H11_1954 0.69 -0.3 168,178 + Ac3H11_1954 0.69 +0.2 168,178 + Ac3H11_1954 0.69 +0.6 168,178 + Ac3H11_1954 0.69 -1.0 168,179 - +1.9 168,179 - Ac3H11_1954 0.69 +0.6 168,179 - Ac3H11_1954 0.69 +0.3 168,333 + Ac3H11_1954 0.86 -0.7 168,333 + Ac3H11_1954 0.86 +0.1 168,334 - Ac3H11_1954 0.86 -1.3 168,334 - Ac3H11_1954 0.86 -0.1 168,337 + Ac3H11_1954 0.86 -1.2 168,337 + Ac3H11_1954 0.86 +0.4 168,337 + Ac3H11_1954 0.86 +0.4 168,338 - +0.9 168,338 - Ac3H11_1954 0.86 +0.5 168,338 - Ac3H11_1954 0.86 -0.6 168,346 + Ac3H11_1954 0.87 -0.4 168,346 + Ac3H11_1954 0.87 -0.6 168,346 + Ac3H11_1954 0.87 -0.4 168,346 + Ac3H11_1954 0.87 +0.2 168,347 - -1.1 168,347 - Ac3H11_1954 0.87 -0.1 168,347 - Ac3H11_1954 0.87 -0.1 168,347 - Ac3H11_1954 0.87 -0.7 168,409 + +2.6 168,409 + +0.7 168,409 + +0.6 168,410 - -1.3 168,433 + -0.3 168,433 + +0.3 168,433 + +0.2 168,433 + +0.1 168,433 + +0.2 168,433 + -0.8 168,433 + -0.8 168,433 + +1.3 168,434 - +0.3 168,434 - +1.9 168,434 - -0.7 168,434 - -0.7 168,434 - +0.9 168,434 - +0.1 168,434 - -0.9 168,434 - +1.5 168,438 + +0.6 168,438 + +0.5 168,461 + +0.5 168,464 + -0.1 168,464 + +0.6 168,465 - -0.9 168,465 - +0.6 168,475 - -1.4 168,486 + -0.2 168,486 + -0.4 168,487 - -0.4 168,492 + +1.2 168,492 + +1.4 168,492 + -0.7 168,492 + -0.2 168,493 - -0.7 168,493 - -1.1 168,536 - +1.9 168,536 - -0.5 168,536 - -2.6 168,579 - -1.0 168,718 - Ac3H11_1955 0.15 -1.1 168,738 + Ac3H11_1955 0.18 -0.4 168,738 + +0.9 168,738 + Ac3H11_1955 0.18 -0.4 168,738 + +0.3 168,739 - +1.9 168,739 - Ac3H11_1955 0.18 +0.1 168,739 - Ac3H11_1955 0.18 -0.9 168,739 - Ac3H11_1955 0.18 -1.8 168,822 + Ac3H11_1955 0.27 -1.3 168,822 + Ac3H11_1955 0.27 -1.3 168,823 - Ac3H11_1955 0.27 -2.0 168,823 - Ac3H11_1955 0.27 -0.9 168,823 - +0.3 168,945 + Ac3H11_1955 0.41 -0.1 168,945 + Ac3H11_1955 0.41 -0.1 168,945 + Ac3H11_1955 0.41 +0.9 168,945 + Ac3H11_1955 0.41 -0.1 168,945 + Ac3H11_1955 0.41 -1.3 168,945 + Ac3H11_1955 0.41 -0.4 168,945 + Ac3H11_1955 0.41 +1.9 168,945 + Ac3H11_1955 0.41 -0.4 168,945 + Ac3H11_1955 0.41 -0.7 168,946 - Ac3H11_1955 0.41 +0.3 168,946 - +0.9 168,946 - Ac3H11_1955 0.41 +0.9 169,218 + Ac3H11_1955 0.71 -0.3 169,218 + +1.9 169,219 - Ac3H11_1955 0.71 -0.4 169,219 - +0.3 169,219 - Ac3H11_1955 0.71 -0.1 169,219 - Ac3H11_1955 0.71 -0.9 169,219 - Ac3H11_1955 0.71 +0.6 169,350 + Ac3H11_1955 0.86 -0.4 169,350 + +1.9 169,350 + Ac3H11_1955 0.86 -0.1 169,351 - Ac3H11_1955 0.86 -0.7
Or see this region's nucleotide sequence