Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29980 and AZOBR_RS29985 are separated by 30 nucleotides AZOBR_RS29985 and AZOBR_RS29990 are separated by 303 nucleotides
AZOBR_RS29980: AZOBR_RS29980 - saccharopine dehydrogenase, at 66,283 to 67,410
_RS29980
AZOBR_RS29985: AZOBR_RS29985 - pyruvate oxidase, at 67,441 to 69,195
_RS29985
AZOBR_RS29990: AZOBR_RS29990 - putative dioxygenase subunit, at 69,499 to 70,425
_RS29990
Position (kb) 67
68
69
70 Strain fitness (log2 ratio) -2
-1
0
1
2 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.767 kb on - strand, within AZOBR_RS29980 at 66.898 kb on + strand, within AZOBR_RS29980 at 67.178 kb on - strand, within AZOBR_RS29980 at 67.204 kb on + strand, within AZOBR_RS29980 at 67.442 kb on + strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.731 kb on - strand, within AZOBR_RS29985 at 67.731 kb on - strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.877 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.331 kb on - strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.340 kb on - strand, within AZOBR_RS29985 at 68.814 kb on - strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.936 kb on + strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 69.335 kb on - strand at 69.458 kb on + strand at 69.459 kb on - strand at 69.459 kb on - strand at 69.514 kb on - strand at 69.514 kb on - strand at 69.638 kb on - strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.893 kb on - strand, within AZOBR_RS29990 at 70.040 kb on - strand, within AZOBR_RS29990
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 66,766 + AZOBR_RS29980 0.43 +0.8 66,766 + AZOBR_RS29980 0.43 +0.5 66,766 + AZOBR_RS29980 0.43 +0.0 66,767 - AZOBR_RS29980 0.43 -0.8 66,898 + AZOBR_RS29980 0.55 -0.6 67,178 - AZOBR_RS29980 0.79 +0.1 67,204 + AZOBR_RS29980 0.82 +1.4 67,442 + -0.2 67,443 - -0.1 67,443 - -0.5 67,443 - -0.0 67,443 - -0.8 67,443 - -0.2 67,731 - AZOBR_RS29985 0.17 -0.7 67,731 - AZOBR_RS29985 0.17 +0.4 67,820 + AZOBR_RS29985 0.22 -0.2 67,820 + AZOBR_RS29985 0.22 -0.7 67,820 + AZOBR_RS29985 0.22 +0.4 67,877 + AZOBR_RS29985 0.25 -0.5 68,330 + AZOBR_RS29985 0.51 +0.1 68,330 + AZOBR_RS29985 0.51 -0.1 68,331 - AZOBR_RS29985 0.51 -0.8 68,339 + AZOBR_RS29985 0.51 +0.0 68,339 + AZOBR_RS29985 0.51 -0.4 68,339 + AZOBR_RS29985 0.51 +0.1 68,339 + AZOBR_RS29985 0.51 -0.3 68,340 - AZOBR_RS29985 0.51 -0.4 68,814 - AZOBR_RS29985 0.78 +0.2 68,864 + AZOBR_RS29985 0.81 -1.3 68,864 + AZOBR_RS29985 0.81 +1.1 68,865 - AZOBR_RS29985 0.81 -1.8 68,865 - AZOBR_RS29985 0.81 -0.2 68,865 - AZOBR_RS29985 0.81 +0.3 68,865 - AZOBR_RS29985 0.81 +1.5 68,886 - AZOBR_RS29985 0.82 -0.2 68,886 - AZOBR_RS29985 0.82 +0.3 68,936 + AZOBR_RS29985 0.85 +0.5 68,937 - AZOBR_RS29985 0.85 +0.1 68,937 - AZOBR_RS29985 0.85 +2.4 69,335 - -0.4 69,458 + -0.1 69,459 - -1.0 69,459 - -0.7 69,514 - +1.2 69,514 - -0.0 69,638 - AZOBR_RS29990 0.15 +0.6 69,892 + AZOBR_RS29990 0.42 +1.3 69,892 + AZOBR_RS29990 0.42 +0.2 69,892 + AZOBR_RS29990 0.42 +0.2 69,893 - AZOBR_RS29990 0.43 +0.6 70,040 - AZOBR_RS29990 0.58 +0.5
Or see this region's nucleotide sequence