Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07245 and AZOBR_RS07250 are separated by 33 nucleotides AZOBR_RS07250 and AZOBR_RS07255 are separated by 28 nucleotides AZOBR_RS07255 and AZOBR_RS07260 are separated by 25 nucleotides
AZOBR_RS07245: AZOBR_RS07245 - RNA-metabolising metallo-beta-lactamase, at 1,528,835 to 1,530,499
_RS07245
AZOBR_RS07250: AZOBR_RS07250 - methylmalonyl-CoA epimerase, at 1,530,533 to 1,530,937
_RS07250
AZOBR_RS07255: AZOBR_RS07255 - hypothetical protein, at 1,530,966 to 1,531,214
_RS07255
AZOBR_RS07260: AZOBR_RS07260 - DNA-3-methyladenine glycosylase, at 1,531,240 to 1,531,839
_RS07260
Position (kb) 1530
1531 Strain fitness (log2 ratio) -2
-1
0
1 at 1529.696 kb on + strand, within AZOBR_RS07245 at 1529.697 kb on - strand, within AZOBR_RS07245 at 1529.965 kb on + strand, within AZOBR_RS07245 at 1529.965 kb on + strand, within AZOBR_RS07245 at 1529.966 kb on - strand, within AZOBR_RS07245 at 1529.966 kb on - strand, within AZOBR_RS07245 at 1529.966 kb on - strand, within AZOBR_RS07245 at 1529.969 kb on + strand, within AZOBR_RS07245 at 1529.969 kb on + strand, within AZOBR_RS07245 at 1529.969 kb on + strand, within AZOBR_RS07245 at 1529.969 kb on + strand, within AZOBR_RS07245 at 1529.969 kb on + strand, within AZOBR_RS07245 at 1529.970 kb on - strand, within AZOBR_RS07245 at 1529.970 kb on - strand, within AZOBR_RS07245 at 1529.970 kb on - strand, within AZOBR_RS07245 at 1529.970 kb on - strand, within AZOBR_RS07245 at 1530.495 kb on + strand at 1530.776 kb on + strand, within AZOBR_RS07250 at 1530.777 kb on - strand, within AZOBR_RS07250 at 1530.994 kb on - strand, within AZOBR_RS07255 at 1530.994 kb on - strand, within AZOBR_RS07255 at 1530.994 kb on - strand, within AZOBR_RS07255 at 1530.994 kb on - strand, within AZOBR_RS07255 at 1531.700 kb on - strand, within AZOBR_RS07260
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 1,529,696 + AZOBR_RS07245 0.52 +0.4 1,529,697 - AZOBR_RS07245 0.52 -0.6 1,529,965 + AZOBR_RS07245 0.68 -0.1 1,529,965 + AZOBR_RS07245 0.68 -1.2 1,529,966 - AZOBR_RS07245 0.68 -0.7 1,529,966 - AZOBR_RS07245 0.68 -0.4 1,529,966 - AZOBR_RS07245 0.68 +0.1 1,529,969 + AZOBR_RS07245 0.68 +0.3 1,529,969 + AZOBR_RS07245 0.68 +0.2 1,529,969 + AZOBR_RS07245 0.68 -0.1 1,529,969 + AZOBR_RS07245 0.68 -0.6 1,529,969 + AZOBR_RS07245 0.68 +0.2 1,529,970 - AZOBR_RS07245 0.68 +0.4 1,529,970 - AZOBR_RS07245 0.68 +1.1 1,529,970 - AZOBR_RS07245 0.68 -0.7 1,529,970 - AZOBR_RS07245 0.68 -0.0 1,530,495 + +0.0 1,530,776 + AZOBR_RS07250 0.60 -0.2 1,530,777 - AZOBR_RS07250 0.60 +0.1 1,530,994 - AZOBR_RS07255 0.11 +0.4 1,530,994 - AZOBR_RS07255 0.11 -0.4 1,530,994 - AZOBR_RS07255 0.11 -2.4 1,530,994 - AZOBR_RS07255 0.11 +0.4 1,531,700 - AZOBR_RS07260 0.77 +0.2
Or see this region's nucleotide sequence