Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27105

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
				remove
5,936,482	+			-0.7
5,936,548	+			+0.4
5,936,549	-			-2.0
5,936,549	-			-0.1
5,936,552	-			+0.5
5,936,552	-			+0.7
5,936,552	-			+0.7
5,936,592	+			+1.1
5,936,592	+			-1.9
5,936,593	-			+2.4
5,936,612	+			-0.4
5,936,612	+			+0.1
5,936,612	+			+0.6
5,936,612	+			-0.7
5,936,613	-			-0.2
5,936,613	-			-0.6
5,936,613	-			+1.1
5,936,613	-			+0.1
5,936,613	-			+0.6
5,936,613	-			+0.6
5,936,615	+			-0.9
5,936,616	-			+0.1
5,936,616	-			-1.0
5,936,616	-			-1.7
5,936,623	+			+0.1
5,936,711	+			+0.5
5,936,722	-			-0.0
5,936,751	-			-0.2
5,936,753	+			-0.9
5,936,753	+			-2.9
5,936,754	-			-0.9
5,936,754	-			+1.1
5,936,913	+	AO353_27100	0.11	-0.1
5,936,913	+	AO353_27100	0.11	-1.9
5,936,914	-	AO353_27100	0.11	-0.9
5,936,974	+	AO353_27100	0.25	+0.1
5,936,974	+	AO353_27100	0.25	-0.8
5,936,974	+	AO353_27100	0.25	+2.1
5,936,975	-	AO353_27100	0.25	+0.4
5,936,975	-	AO353_27100	0.25	-0.4
5,936,975	-	AO353_27100	0.25	-0.3
5,936,975	-	AO353_27100	0.25	+0.4
5,936,975	-	AO353_27100	0.25	-0.4
5,936,975	-	AO353_27100	0.25	+0.0
5,936,978	+	AO353_27100	0.26	+0.5
5,936,979	-	AO353_27100	0.26	-0.2
5,937,099	+	AO353_27100	0.54	+0.1
5,937,099	+	AO353_27100	0.54	+0.3
5,937,099	+	AO353_27100	0.54	+0.9
5,937,099	+	AO353_27100	0.54	+2.1
5,937,099	+	AO353_27100	0.54	+0.5
5,937,099	+	AO353_27100	0.54	+0.7
5,937,100	-	AO353_27100	0.54	-1.4
5,937,100	-	AO353_27100	0.54	-2.3
5,937,100	-	AO353_27100	0.54	+0.3
5,937,100	-	AO353_27100	0.54	-1.7
5,937,100	-	AO353_27100	0.54	-1.9
5,937,100	-	AO353_27100	0.54	-0.0
5,937,111	+	AO353_27100	0.57	-0.7
5,937,111	+	AO353_27100	0.57	+0.7
5,937,111	+	AO353_27100	0.57	-0.3
5,937,111	+	AO353_27100	0.57	+0.9
5,937,112	-	AO353_27100	0.57	-0.4
5,937,112	-	AO353_27100	0.57	+0.4
5,937,112	-	AO353_27100	0.57	+0.8
5,937,112	-	AO353_27100	0.57	-0.4
5,937,175	+	AO353_27100	0.72	-1.0
5,937,175	+	AO353_27100	0.72	-0.6
5,937,175	+	AO353_27100	0.72	-1.4
5,937,176	-	AO353_27100	0.72	-1.0
5,937,263	+			-0.4
5,937,263	+			-1.4
5,937,263	+			+0.6
5,937,309	-			-0.3
5,937,349	+			+0.1
5,937,349	+			+0.5
5,937,349	+			-0.4
5,937,350	-			+0.2
5,937,350	-			-0.7
5,937,350	-			-0.4
5,937,350	-			-0.1
5,937,394	+			+0.4
5,937,394	+			+0.5
5,937,394	+			+0.1
5,937,395	-			-0.3
5,937,395	-			+0.9
5,937,395	-			-2.2
5,937,395	-			-1.7
5,937,395	-			-1.7
5,937,396	+			-1.7
5,937,396	+			-0.7
5,937,396	+			-0.0
5,937,396	+			+0.8
5,937,396	+			-1.7
5,937,396	+			+1.1
5,937,396	+			+0.2
5,937,396	+			-0.1
5,937,396	+			+0.9
5,937,396	+			-0.1
5,937,396	+			+0.7
5,937,396	+			+0.6
5,937,396	+			-0.1
5,937,396	+			-0.4
5,937,396	+			-1.2
5,937,397	-			+0.3
5,937,397	-			+0.4
5,937,397	-			-0.7
5,937,397	-			+1.6
5,937,397	-			-0.7
5,937,397	-			-0.6
5,937,397	-			+2.3
5,937,397	-			-0.4
5,937,397	-			-1.2
5,937,397	-			+0.1
5,937,397	-			-1.2
5,937,397	-			-0.9
5,937,397	-			-0.2
5,937,397	-			-0.1
5,937,397	-			+0.1
5,937,397	-			-0.7
5,937,397	-			-2.9
5,937,397	-			-0.2
5,937,443	+			+0.7
5,937,443	+			+0.1
5,937,451	-			-0.7
5,937,451	-			-0.5
5,937,529	-			-1.2
5,937,648	-			+1.1
5,937,648	-			-0.2
5,937,732	+	AO353_27105	0.11	+0.6
5,937,748	-	AO353_27105	0.11	-1.1
5,937,839	+	AO353_27105	0.15	+1.1
5,937,839	+	AO353_27105	0.15	+0.4
5,937,840	-	AO353_27105	0.15	+1.6
5,937,840	-	AO353_27105	0.15	-0.9
5,937,840	-	AO353_27105	0.15	-0.3
5,937,886	-	AO353_27105	0.16	+1.7
5,937,886	-	AO353_27105	0.16	-1.9
5,937,915	-	AO353_27105	0.18	-0.2
5,938,090	+	AO353_27105	0.24	+0.2
5,938,091	-	AO353_27105	0.24	-1.0
5,938,091	-	AO353_27105	0.24	+0.2
5,938,091	-	AO353_27105	0.24	+0.2
5,938,091	-	AO353_27105	0.24	-0.0
5,938,091	-	AO353_27105	0.24	-0.1
5,938,130	+	AO353_27105	0.26	+0.6
5,938,130	+	AO353_27105	0.26	+1.2
5,938,130	+	AO353_27105	0.26	+0.2
5,938,174	-	AO353_27105	0.27	-0.3
5,938,226	+	AO353_27105	0.29	+0.1
5,938,226	+	AO353_27105	0.29	+0.8
5,938,227	-			-0.4
5,938,227	-	AO353_27105	0.30	+0.2
5,938,227	-	AO353_27105	0.30	-0.5
5,938,227	-	AO353_27105	0.30	-0.2
5,938,305	+	AO353_27105	0.33	-0.0
5,938,305	+	AO353_27105	0.33	-0.8
5,938,305	+	AO353_27105	0.33	-0.2
5,938,305	+	AO353_27105	0.33	+0.0
5,938,306	-	AO353_27105	0.33	+0.5
5,938,306	-	AO353_27105	0.33	-1.2
5,938,306	-	AO353_27105	0.33	-1.0
5,938,306	-	AO353_27105	0.33	+0.5
5,938,370	+	AO353_27105	0.35	-0.8
5,938,370	+	AO353_27105	0.35	+0.9
5,938,370	+	AO353_27105	0.35	-1.0
5,938,370	+	AO353_27105	0.35	-0.8
5,938,370	+	AO353_27105	0.35	-1.7
5,938,370	+	AO353_27105	0.35	-0.1
5,938,370	+	AO353_27105	0.35	-0.2
5,938,370	+	AO353_27105	0.35	-0.3
5,938,370	+	AO353_27105	0.35	+1.2
5,938,370	+	AO353_27105	0.35	-0.3
5,938,370	+	AO353_27105	0.35	+0.5
5,938,370	+	AO353_27105	0.35	-0.5
5,938,371	-			+0.7
5,938,371	-	AO353_27105	0.35	+0.4
5,938,371	-	AO353_27105	0.35	-1.3
5,938,371	-	AO353_27105	0.35	+0.8
5,938,371	-	AO353_27105	0.35	-0.7
5,938,371	-	AO353_27105	0.35	+1.0
5,938,371	-	AO353_27105	0.35	-2.2
5,938,371	-	AO353_27105	0.35	+0.3
5,938,371	-	AO353_27105	0.35	-0.7
5,938,371	-	AO353_27105	0.35	-0.3
5,938,372	+	AO353_27105	0.35	+0.5
5,938,372	+	AO353_27105	0.35	-0.2
5,938,373	-	AO353_27105	0.35	+1.0
5,938,373	-	AO353_27105	0.35	+0.4
5,938,379	-	AO353_27105	0.35	+0.7
5,938,409	+	AO353_27105	0.37	+1.4
5,938,410	-	AO353_27105	0.37	+0.4
5,938,410	-	AO353_27105	0.37	+0.2
5,938,412	-	AO353_27105	0.37	+1.2
5,938,423	+	AO353_27105	0.37	-0.5
5,938,423	+	AO353_27105	0.37	+1.5
5,938,423	+	AO353_27105	0.37	-1.3
5,938,424	-	AO353_27105	0.37	+1.2
5,938,424	-	AO353_27105	0.37	+0.3
5,938,424	-	AO353_27105	0.37	-0.1
5,938,564	+	AO353_27105	0.42	-1.0
5,938,740	+	AO353_27105	0.49	+0.6
5,938,740	+	AO353_27105	0.49	+0.6
5,938,740	+	AO353_27105	0.49	+0.3
5,938,741	-	AO353_27105	0.49	-0.1
5,938,741	-	AO353_27105	0.49	-2.4
5,938,741	-	AO353_27105	0.49	-0.4
5,938,741	-	AO353_27105	0.49	-0.9
5,938,863	+	AO353_27105	0.54	+0.6
5,938,863	+	AO353_27105	0.54	+0.2
5,938,863	+	AO353_27105	0.54	-0.6
5,938,863	+	AO353_27105	0.54	-1.9
5,938,863	+	AO353_27105	0.54	-2.5
5,938,864	-	AO353_27105	0.54	-0.0
5,938,912	+	AO353_27105	0.56	+0.1
5,938,912	+	AO353_27105	0.56	-0.3
5,938,913	-	AO353_27105	0.56	-0.2
5,938,956	+	AO353_27105	0.58	+1.2
5,938,956	+	AO353_27105	0.58	-0.1
5,938,957	-	AO353_27105	0.58	-0.3
5,938,957	-	AO353_27105	0.58	-0.2
5,939,013	+	AO353_27105	0.60	-0.8
5,939,013	+	AO353_27105	0.60	+0.6
5,939,013	+	AO353_27105	0.60	+0.5
5,939,048	+	AO353_27105	0.61	+1.5
5,939,195	+	AO353_27105	0.67	-0.9
5,939,196	-	AO353_27105	0.67	-0.5
5,939,232	-	AO353_27105	0.68	-0.4
5,939,247	-	AO353_27105	0.69	-1.0
5,939,288	+	AO353_27105	0.70	+1.7
5,939,289	-	AO353_27105	0.70	+0.2
5,939,289	-	AO353_27105	0.70	+0.2
5,939,289	-	AO353_27105	0.70	-0.7
5,939,289	-	AO353_27105	0.70	-1.8
5,939,289	-	AO353_27105	0.70	+1.2
5,939,341	+	AO353_27105	0.72	-0.5
5,939,341	+	AO353_27105	0.72	-0.3
5,939,341	+	AO353_27105	0.72	-0.4
5,939,341	+	AO353_27105	0.72	-0.7
5,939,341	+	AO353_27105	0.72	+0.0
5,939,341	+	AO353_27105	0.72	+0.2
5,939,342	-	AO353_27105	0.72	+0.6
5,939,342	-			-0.7
5,939,342	-	AO353_27105	0.72	+0.8
5,939,342	-	AO353_27105	0.72	-0.8
5,939,342	-	AO353_27105	0.72	+0.2
5,939,342	-	AO353_27105	0.72	-1.2
5,939,365	+	AO353_27105	0.73	-0.7
5,939,365	+	AO353_27105	0.73	-0.4
5,939,365	+	AO353_27105	0.73	-1.4
5,939,366	-	AO353_27105	0.73	-0.8
5,939,366	-	AO353_27105	0.73	-0.0
5,939,538	+	AO353_27105	0.80	-1.4
5,939,538	+	AO353_27105	0.80	+0.9
5,939,538	+	AO353_27105	0.80	+0.9
5,939,538	+	AO353_27105	0.80	+1.2
5,939,538	+	AO353_27105	0.80	-0.4
5,939,538	+	AO353_27105	0.80	+0.5
5,939,538	+	AO353_27105	0.80	+0.4
5,939,538	+	AO353_27105	0.80	-0.9
5,939,539	-	AO353_27105	0.80	+1.9
5,939,539	-	AO353_27105	0.80	+0.8
5,939,539	-	AO353_27105	0.80	+0.2
5,939,539	-	AO353_27105	0.80	-0.4
5,939,539	-	AO353_27105	0.80	+0.7
5,939,539	-	AO353_27105	0.80	-1.1
5,939,566	+	AO353_27105	0.81	-0.2
5,939,567	-	AO353_27105	0.81	-0.3
5,939,567	-	AO353_27105	0.81	-0.2
5,939,567	-	AO353_27105	0.81	-0.6
5,939,567	-	AO353_27105	0.81	-0.4
5,939,567	-	AO353_27105	0.81	+0.2
5,939,587	+	AO353_27105	0.82	+0.2
5,939,588	-	AO353_27105	0.82	-0.4
5,939,664	+	AO353_27105	0.85	+1.7
5,939,665	-	AO353_27105	0.85	-0.3
5,939,740	+	AO353_27105	0.88	+0.2
5,939,740	+	AO353_27105	0.88	+0.2
5,939,746	+	AO353_27105	0.88	+0.9
5,939,802	+			+0.3
5,939,802	+			-1.4
5,939,802	+			+2.0
5,939,803	-			+1.9
5,939,803	-			-0.4
5,939,842	+			+1.2
5,939,842	+			-1.4
5,939,842	+			-0.8
5,939,842	+			+0.6
5,939,842	+			-0.4
5,939,842	+			+1.5
5,939,842	+			-0.7
5,939,843	-			-2.8
5,939,843	-			-0.4
5,939,843	-			-0.3
5,939,843	-			-0.1
5,939,861	+			+1.2
5,939,861	+			-0.2
5,939,861	+			-0.6
5,939,867	+			+0.0
5,940,085	+			-1.4
5,940,085	+			-1.2
5,940,085	+			-0.2
5,940,085	+			+0.0
5,940,085	+			+1.2
5,940,085	+			-1.4
5,940,086	-			-1.2
5,940,086	-			-0.7
5,940,086	-			-0.8
5,940,086	-			+0.2
5,940,086	-			-1.7
5,940,112	+			-1.2
5,940,133	+			-0.0
5,940,133	+			+0.9
5,940,134	-			-0.1
5,940,134	-			-0.3
5,940,134	-			+0.3
5,940,161	+			-1.5
5,940,161	+			-2.0
5,940,161	+			-0.9
5,940,161	+			+0.6
5,940,161	+			+0.2
5,940,162	-			-0.4
5,940,162	-			-0.7
5,940,170	+			+1.7
5,940,182	+			-0.9
5,940,182	+			-0.5
5,940,182	+			+0.2
5,940,182	+			-0.1
5,940,183	-			+2.3
5,940,183	-			+0.5
5,940,255	+			+0.7
5,940,340	+			+0.6
5,940,340	+			+1.2
5,940,340	+			+0.3
5,940,340	+			-0.3
5,940,373	+	AO353_27110	0.14	+0.3
5,940,373	+	AO353_27110	0.14	+0.8
5,940,373	+	AO353_27110	0.14	-0.2
5,940,373	+	AO353_27110	0.14	-0.4
5,940,374	-	AO353_27110	0.15	-1.4
5,940,374	-	AO353_27110	0.15	+0.8
5,940,374	-	AO353_27110	0.15	-1.2
5,940,374	-	AO353_27110	0.15	-0.8
5,940,374	-	AO353_27110	0.15	+1.0
5,940,374	-	AO353_27110	0.15	-1.4
5,940,374	-	AO353_27110	0.15	+0.2
5,940,398	+	AO353_27110	0.21	+0.0
5,940,399	-	AO353_27110	0.21	-0.3
5,940,399	-	AO353_27110	0.21	+0.8
5,940,399	-	AO353_27110	0.21	+0.3
5,940,424	-	AO353_27110	0.27	+0.2
5,940,453	+	AO353_27110	0.34	-0.7
5,940,453	+	AO353_27110	0.34	-0.2
5,940,482	+	AO353_27110	0.42	-0.7
5,940,482	+	AO353_27110	0.42	+0.8
5,940,482	+	AO353_27110	0.42	+0.8
5,940,482	+	AO353_27110	0.42	-0.8
5,940,483	-	AO353_27110	0.42	+1.3
5,940,483	-	AO353_27110	0.42	+0.2
5,940,483	-	AO353_27110	0.42	+0.4
5,940,528	-	AO353_27110	0.53	-0.4
5,940,589	+	AO353_27110	0.68	-0.4
5,940,589	+	AO353_27110	0.68	-0.1
5,940,589	+	AO353_27110	0.68	+0.3
5,940,640	+	AO353_27110	0.81	-0.2
5,940,641	-	AO353_27110	0.81	-0.4
5,940,641	-	AO353_27110	0.81	+0.2
5,940,853	+			+0.2
5,940,854	-			+0.3
5,940,971	+			-0.8
5,940,971	+			-0.4
5,940,971	+			+0.6
5,940,972	-			+0.8
5,940,972	-			+1.0
5,940,972	-			-0.4
5,940,972	-			-1.2
5,940,972	-			+0.2
5,940,972	-			+0.4
5,940,983	-			-1.9
5,940,983	-			-0.3
5,941,054	+			-1.3
5,941,054	+			-1.0
5,941,054	+			-0.8
5,941,055	-			+0.4
5,941,055	-			+1.2
5,941,055	-			+0.3
5,941,055	-			+1.2
5,941,055	-			+0.1
5,941,058	+			+0.7
5,941,058	+			-0.8
5,941,059	-			-1.7
5,941,059	-			+0.6
5,941,059	-			+0.9
5,941,059	-			-0.9
5,941,059	-			+0.8
5,941,059	-			-0.7

Or see this region's nucleotide sequence