Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26945

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
5,908,294	+		AO353_26940	0.54	+0.3
5,908,294	+		AO353_26940	0.54	-1.1
5,908,294	+		AO353_26940	0.54	+0.5
5,908,295	-		AO353_26940	0.54	-0.3
5,908,295	-		AO353_26940	0.54	+0.9
5,908,295	-		AO353_26940	0.54	-1.9
5,908,295	-		AO353_26940	0.54	+0.3
5,908,295	-		AO353_26940	0.54	-1.2
5,908,676	+		AO353_26940	0.79	-1.3
5,908,676	+		AO353_26940	0.79	-3.2
5,908,676	+		AO353_26940	0.79	+0.5
5,908,676	+		AO353_26940	0.79	+1.1
5,908,676	+		AO353_26940	0.79	+0.1
5,908,676	+		AO353_26940	0.79	-1.3
5,908,676	+		AO353_26940	0.79	+2.1
5,908,677	-		AO353_26940	0.79	-0.0
5,908,677	-		AO353_26940	0.79	-0.9
5,908,677	-		AO353_26940	0.79	-0.7
5,908,677	-		AO353_26940	0.79	-1.0
5,908,677	-		AO353_26940	0.79	-0.2
5,908,677	-		AO353_26940	0.79	-0.1
5,908,677	-		AO353_26940	0.79	-0.0
5,908,728	+		AO353_26940	0.82	+0.3
5,908,729	-		AO353_26940	0.82	+0.2
5,908,738	+		AO353_26940	0.83	-1.9
5,908,738	+		AO353_26940	0.83	+0.9
5,908,772	+		AO353_26940	0.85	+1.1
5,908,772	+		AO353_26940	0.85	-1.0
5,908,773	-		AO353_26940	0.85	+0.7
5,908,906	+				-0.8
5,908,906	+				+1.2
5,908,906	+				+0.3
5,908,907	-				-0.6
5,908,943	-				-1.4
5,908,946	+				+0.5
5,908,946	+				-2.2
5,908,947	-				-0.2
5,908,999	+				-0.7
5,909,000	-				-0.3
5,909,000	-				+0.2
5,909,000	-				+1.2
5,909,003	+				+1.7
5,909,003	+				-1.3
5,909,081	-				+1.2
5,909,121	+				+0.7
5,909,121	+				-0.1
5,909,122	-				-0.2
5,909,124	+				-0.1
5,909,179	+				-0.1
5,909,180	-				-0.3
5,909,180	-				-0.7
5,909,195	+				+0.7
5,909,195	+				+0.0
5,909,195	+				-1.0
5,909,196	-				+1.5
5,909,197	+				+0.0
5,909,198	-				+0.4
5,909,198	-				-0.6
5,909,233	-				+1.6
5,909,241	-				-2.2
5,909,246	+				-1.4
5,909,246	+				-1.1
5,909,246	+				-0.4
5,909,247	-				+2.7
5,909,386	+		AO353_26945	0.38	-1.2
5,909,387	-		AO353_26945	0.38	-2.4
5,909,494	+		AO353_26945	0.68	-1.2
5,909,572	+		AO353_26945	0.89	+0.2
5,909,572	+		AO353_26945	0.89	-0.3
5,909,573	-		AO353_26945	0.90	-0.1
5,909,608	+				-1.0
5,909,608	+				-1.2
5,909,608	+				-1.7
5,909,609	-				+1.2
5,909,609	-				-2.4
5,909,657	-				+0.0
5,909,657	-				-0.8
5,909,666	+				+1.2
5,909,667	-				+0.7
5,909,667	-				+1.2
5,909,667	-				+2.2
5,909,667	-				+1.4
5,909,669	-				-0.4
5,909,669	-				+0.0
5,909,669	-				-0.0
5,909,669	-				+0.8
5,909,672	+				-1.0
5,909,672	+				+0.4
5,909,673	-				+0.2
5,909,673	-				+0.0
5,909,716	+				+0.0
5,909,717	-				-0.8
5,909,746	+				+0.2
5,909,747	-				+0.0
5,909,806	+				-1.8
5,909,806	+				-0.2
5,909,807	-				-0.5
5,909,807	-				-1.2
5,909,809	+				+0.7
5,909,810	-				+0.2
5,909,810	-				+0.4
5,909,810	-				-0.0
5,909,839	-				-0.7
5,909,860	+				-2.5
5,909,861	-				+0.0
5,909,882	-		AO353_26950	0.14	-1.2
5,909,893	+		AO353_26950	0.16	-1.8
5,909,894	-		AO353_26950	0.16	+0.2
5,909,894	-		AO353_26950	0.16	+0.7
5,909,894	-		AO353_26950	0.16	-0.4
5,909,910	+		AO353_26950	0.19	-0.8
5,909,910	+		AO353_26950	0.19	-2.2
5,909,964	-		AO353_26950	0.29	-0.7
5,909,999	+		AO353_26950	0.36	-0.2
5,910,000	-		AO353_26950	0.36	+1.9
5,910,000	-		AO353_26950	0.36	-0.2
5,910,260	+		AO353_26950	0.84	-0.8
5,910,260	+				+0.2
5,910,260	+		AO353_26950	0.84	-1.0
5,910,261	-		AO353_26950	0.84	+0.2
5,910,261	-		AO353_26950	0.84	-2.7
5,910,261	-		AO353_26950	0.84	-2.0
5,910,326	-				+0.6
5,910,404	+				+0.3
5,910,430	+				-2.4
5,910,430	+				+0.5
5,910,430	+				+1.7
5,910,430	+				-0.1
5,910,431	-				+0.2
5,910,431	-				+0.2
5,910,431	-				-0.7
5,910,431	-				-0.6
5,910,431	-				-0.8
5,910,431	-				+0.2
5,910,431	-				-0.1
5,910,431	-				-2.0
5,910,444	+				-0.4
5,910,444	+				+2.7
5,910,444	+				+0.4
5,910,444	+				-1.2
5,910,445	-				+1.2
5,910,445	-				-1.5
5,910,445	-				-0.5
5,910,445	-				-0.2
5,910,445	-				-0.4
5,910,447	+				-1.4
5,910,447	+				-0.1
5,910,448	-				+0.2
5,910,448	-				-0.2