Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25530

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
5,630,653	+		AO353_25525	0.60	+0.2
5,630,653	+		AO353_25525	0.60	+1.1
5,630,654	-		AO353_25525	0.61	-0.3
5,630,654	-		AO353_25525	0.61	-1.1
5,630,654	-		AO353_25525	0.61	+0.3
5,630,654	-		AO353_25525	0.61	+0.2
5,630,769	+		AO353_25525	0.71	-0.0
5,630,769	+		AO353_25525	0.71	+0.3
5,630,769	+		AO353_25525	0.71	-0.2
5,630,770	-		AO353_25525	0.71	-0.8
5,630,770	-		AO353_25525	0.71	-0.4
5,630,899	-		AO353_25525	0.83	-1.5
5,630,899	-		AO353_25525	0.83	+2.1
5,631,089	-				-1.7
5,631,089	-				-2.7
5,631,089	-				-0.9
5,631,122	+				-1.2
5,631,122	+				-2.0
5,631,123	-				-1.9
5,631,123	-				-1.7
5,631,123	-				-1.5
5,631,153	-				-1.6
5,631,159	+				-0.3
5,631,165	+				-0.5
5,631,165	+				-1.7
5,631,165	+				+0.2
5,631,165	+				-0.9
5,631,166	-				-1.5
5,631,272	+				+1.2
5,631,272	+				+0.2
5,631,273	-				-1.7
5,631,273	-				-0.9
5,631,273	-				-2.0
5,631,273	-				-2.9
5,631,283	+				-0.5
5,631,283	+				-0.9
5,631,283	+				-1.1
5,631,323	-				-1.6
5,631,323	-				-1.5
5,631,429	+				+0.5
5,631,429	+				+1.3
5,631,430	-				-0.2
5,631,430	-				-0.7
5,631,584	+		AO353_25530	0.12	-1.7
5,631,584	+		AO353_25530	0.12	-1.7
5,631,585	-		AO353_25530	0.12	-3.0
5,631,585	-		AO353_25530	0.12	-1.5
5,631,585	-		AO353_25530	0.12	-1.5
5,631,744	+		AO353_25530	0.26	-2.1
5,631,745	-		AO353_25530	0.26	-2.1
5,631,840	-		AO353_25530	0.34	-1.7
5,631,872	+		AO353_25530	0.37	-1.2
5,631,873	-		AO353_25530	0.37	-1.6
5,632,157	+		AO353_25530	0.62	-1.7
5,632,157	+		AO353_25530	0.62	-2.1
5,632,157	+		AO353_25530	0.62	-1.1
5,632,157	+		AO353_25530	0.62	-0.9
5,632,158	-		AO353_25530	0.62	-0.5
5,632,251	-		AO353_25530	0.70	-1.2
5,632,330	+		AO353_25530	0.77	+0.3
5,632,330	+		AO353_25530	0.77	-1.1
5,632,332	+		AO353_25530	0.77	-0.8
5,632,332	+		AO353_25530	0.77	+0.1
5,632,332	+		AO353_25530	0.77	+0.5
5,632,445	+		AO353_25530	0.87	-1.7
5,632,445	+		AO353_25530	0.87	-0.4
5,632,445	+		AO353_25530	0.87	-1.2
5,632,445	+		AO353_25530	0.87	-1.3
5,632,445	+		AO353_25530	0.87	+0.8
5,632,448	+		AO353_25530	0.88	+1.1
5,632,611	+				-0.3
5,633,535	+				+0.1
5,633,535	+				-0.2
5,633,535	+				-0.6
5,633,535	+				-0.9