Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24020

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
5,281,660	+		AO353_24015	0.67	-0.5
5,281,660	+		AO353_24015	0.67	+0.1
5,281,660	+		AO353_24015	0.67	-1.0
5,281,660	+		AO353_24015	0.67	-2.1
5,281,660	+		AO353_24015	0.67	-2.2
5,281,661	-		AO353_24015	0.68	-1.1
5,281,661	-		AO353_24015	0.68	-0.7
5,281,661	-		AO353_24015	0.68	-0.9
5,281,722	+		AO353_24015	0.70	-0.9
5,281,722	+		AO353_24015	0.70	-0.7
5,281,723	-		AO353_24015	0.70	+1.3
5,281,723	-		AO353_24015	0.70	+0.4
5,281,895	+		AO353_24015	0.78	-0.4
5,281,895	+		AO353_24015	0.78	-0.5
5,281,896	-		AO353_24015	0.78	-0.8
5,281,896	-		AO353_24015	0.78	+0.7
5,282,304	+				+1.1
5,282,304	+				+1.0
5,282,304	+				+0.3
5,282,304	+				+0.1
5,282,304	+				-0.5
5,282,305	-				-1.2
5,282,305	-				-0.8
5,282,305	-				+1.3
5,282,305	-				+0.5
5,282,305	-				+0.9
5,282,305	-				+1.1
5,282,305	-				-1.9
5,282,305	-				+1.5
5,282,305	-				-0.3
5,282,329	+				-0.5
5,282,330	-				-0.2
5,282,381	-				-0.2
5,282,396	-				-1.7
5,282,403	-				-0.3
5,282,403	-				-0.4
5,282,403	-				-0.4
5,282,403	-				-0.1
5,282,447	-				-1.0
5,282,503	+				+0.3
5,282,503	+				-1.1
5,282,503	+				+1.1
5,282,503	+				-0.5
5,282,503	+				-0.5
5,282,515	-				+0.3
5,282,515	-				-1.2
5,282,638	+				+0.1
5,282,638	+				-1.5
5,282,638	+				+1.5
5,282,638	+				+1.1
5,282,638	+				+0.2
5,282,639	-				-1.5
5,282,639	-				-1.2
5,282,639	-				+1.0
5,282,725	+		AO353_24020	0.25	+1.1
5,282,725	+		AO353_24020	0.25	-1.0
5,282,726	-		AO353_24020	0.26	+0.7
5,282,726	-		AO353_24020	0.26	-1.4
5,282,726	-		AO353_24020	0.26	+1.0
5,282,726	-		AO353_24020	0.26	-0.5
5,282,726	-		AO353_24020	0.26	+0.5
5,282,726	-		AO353_24020	0.26	-0.5
5,282,726	-		AO353_24020	0.26	-0.6
5,282,810	+		AO353_24020	0.42	-1.4
5,282,810	+		AO353_24020	0.42	+1.1
5,282,810	+		AO353_24020	0.42	-2.9
5,282,810	+		AO353_24020	0.42	+0.2
5,282,810	+		AO353_24020	0.42	-0.1
5,282,810	+		AO353_24020	0.42	-0.9
5,282,811	-		AO353_24020	0.42	+0.3
5,282,811	-		AO353_24020	0.42	+0.7
5,282,811	-		AO353_24020	0.42	-0.1
5,282,811	-		AO353_24020	0.42	-0.1
5,282,811	-		AO353_24020	0.42	-2.2
5,282,811	-		AO353_24020	0.42	+0.2
5,282,946	+		AO353_24020	0.68	+0.3
5,282,946	+		AO353_24020	0.68	+0.2
5,282,947	-		AO353_24020	0.68	-1.0
5,282,947	-		AO353_24020	0.68	-0.1
5,283,055	+		AO353_24020	0.89	-2.1
5,283,055	+		AO353_24020	0.89	+0.3
5,283,055	+		AO353_24020	0.89	-1.4
5,283,055	+		AO353_24020	0.89	-1.0
5,283,055	+		AO353_24020	0.89	-0.2
5,283,055	+		AO353_24020	0.89	-1.9
5,283,055	+		AO353_24020	0.89	+1.7
5,283,056	-		AO353_24020	0.89	+1.9
5,283,056	-		AO353_24020	0.89	-0.4
5,283,056	-		AO353_24020	0.89	-0.5
5,283,056	-		AO353_24020	0.89	-1.7
5,283,056	-		AO353_24020	0.89	-1.1
5,283,144	-				-0.5
5,283,144	-				+0.9
5,283,185	+				-0.1
5,283,186	-				+1.1
5,283,191	+				-0.4
5,283,192	-				+1.5
5,283,192	-				+0.1
5,283,256	+				+1.1
5,283,256	+				+0.8
5,283,257	-				-0.1
5,283,407	+				+2.1
5,283,407	+				+1.0
5,283,407	+				+0.5
5,283,407	+				+2.7
5,283,408	-				+0.3
5,283,408	-				+0.1
5,283,596	-		AO353_24025	0.18	+0.5
5,283,889	+		AO353_24025	0.34	+0.6
5,283,889	+		AO353_24025	0.34	+0.6
5,283,889	+		AO353_24025	0.34	-0.9
5,283,889	+		AO353_24025	0.34	+1.5
5,283,890	-				+0.1
5,283,890	-		AO353_24025	0.35	-0.6