Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23210

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
5,091,045	+		AO353_23205	0.24	+0.5
5,091,046	-		AO353_23205	0.24	+0.4
5,091,047	+		AO353_23205	0.25	-0.2
5,091,047	+		AO353_23205	0.25	-0.5
5,091,047	+				+1.1
5,091,047	+		AO353_23205	0.25	+0.2
5,091,047	+		AO353_23205	0.25	+1.0
5,091,047	+		AO353_23205	0.25	+1.1
5,091,048	-		AO353_23205	0.25	-0.2
5,091,048	-		AO353_23205	0.25	+0.4
5,091,048	-		AO353_23205	0.25	+1.1
5,091,048	-		AO353_23205	0.25	-1.2
5,091,048	-		AO353_23205	0.25	-0.3
5,091,048	-		AO353_23205	0.25	-0.8
5,091,048	-		AO353_23205	0.25	-2.1
5,091,079	-		AO353_23205	0.29	+1.4
5,091,079	-		AO353_23205	0.29	-1.1
5,091,079	-		AO353_23205	0.29	+0.3
5,091,120	+		AO353_23205	0.35	-1.5
5,091,121	-		AO353_23205	0.35	-0.1
5,091,121	-		AO353_23205	0.35	-0.6
5,091,166	-		AO353_23205	0.42	+0.5
5,091,200	-		AO353_23205	0.47	+0.2
5,091,262	+		AO353_23205	0.56	-0.2
5,091,263	-		AO353_23205	0.56	-0.8
5,091,314	+		AO353_23205	0.64	+0.1
5,091,314	+		AO353_23205	0.64	+0.5
5,091,314	+		AO353_23205	0.64	+0.8
5,091,314	+		AO353_23205	0.64	+0.5
5,091,337	+		AO353_23205	0.67	+0.4
5,091,383	-		AO353_23205	0.74	-0.5
5,091,405	+		AO353_23205	0.77	+1.5
5,091,405	+		AO353_23205	0.77	+0.7
5,091,406	-		AO353_23205	0.77	+0.1
5,091,406	-		AO353_23205	0.77	-1.2
5,091,554	+				+1.3
5,091,554	+				-0.3
5,091,554	+				-1.2
5,091,554	+				+1.2
5,091,554	+				+0.4
5,091,554	+				+0.8
5,091,554	+				+0.6
5,091,554	+				-0.1
5,091,554	+				+0.2
5,091,554	+				+1.6
5,091,555	-				-0.2
5,091,555	-				+1.1
5,091,555	-				+0.3
5,091,555	-				-2.2
5,091,586	+				+0.1
5,091,586	+				+0.4
5,091,586	+				+0.1
5,091,586	+				+0.2
5,091,586	+				-0.0
5,091,586	+				+0.4
5,091,587	-				-0.1
5,091,587	-				-0.1
5,091,604	+				+0.5
5,091,605	-				-0.1
5,091,626	+				+1.3
5,091,626	+				-0.5
5,091,627	-				-1.0
5,091,634	+				+1.7
5,091,635	-				-0.4
5,091,635	-				-0.0
5,091,635	-				+0.7
5,091,635	-				-0.9
5,091,662	+				+1.3
5,091,662	+				+1.1
5,091,663	-				+0.5
5,091,663	-				+0.6
5,091,663	-				-1.4
5,091,663	-				-0.9
5,091,665	+				+3.4
5,091,665	+				+0.7
5,091,666	-				-0.2
5,091,666	-				-2.8
5,091,678	+				+0.6
5,091,678	+				+1.5
5,091,679	-				+0.0
5,091,679	-				-0.4
5,091,679	-				-0.9
5,091,680	+				+1.1
5,091,680	+				+1.7
5,091,733	+				+0.9
5,091,734	-				+1.1
5,091,734	-				+0.5
5,091,740	+				+1.7
5,091,740	+				+1.5
5,091,741	-				+0.6
5,091,746	+				+0.1
5,091,746	+				-0.3
5,091,747	-				-1.1
5,091,747	-				-1.6
5,091,747	-				-0.5
5,091,747	-				-0.2
5,091,759	+				+0.8
5,091,759	+				+1.7
5,091,759	+				+1.3
5,091,759	+				+0.5
5,091,760	-				+1.0
5,091,760	-				+0.5
5,091,760	-				-1.1
5,091,762	+				+0.9
5,091,762	+				+1.2
5,091,762	+				+1.7
5,091,763	-				-1.6
5,091,763	-				-0.1
5,091,863	+				+0.5
5,091,863	+				-0.2
5,091,864	-				+0.4
5,091,864	-				+2.1
5,091,864	-				-0.6
5,091,864	-				+0.3
5,091,864	-				-0.0
5,091,936	+				-1.7
5,092,090	+				+0.4
5,092,090	+				-1.2
5,092,090	+				+0.1
5,092,207	-		AO353_23210	0.12	+0.4
5,092,207	-		AO353_23210	0.12	+0.3
5,092,237	+		AO353_23210	0.13	-1.2
5,092,238	-		AO353_23210	0.13	+1.1
5,092,363	+		AO353_23210	0.19	+0.6
5,092,363	+		AO353_23210	0.19	-2.7
5,092,364	-		AO353_23210	0.19	+0.1
5,092,364	-		AO353_23210	0.19	-0.5
5,092,364	-		AO353_23210	0.19	-0.6
5,092,371	+		AO353_23210	0.19	+0.4
5,092,492	+		AO353_23210	0.25	-0.8
5,092,493	-		AO353_23210	0.25	-0.8
5,092,554	+		AO353_23210	0.28	-0.4
5,092,555	-		AO353_23210	0.28	-0.7
5,092,612	+		AO353_23210	0.30	-0.5
5,092,612	+		AO353_23210	0.30	-0.8
5,092,613	-		AO353_23210	0.30	-0.2
5,092,613	-		AO353_23210	0.30	-0.1
5,092,613	-		AO353_23210	0.30	+0.2
5,092,613	-		AO353_23210	0.30	-1.7
5,092,613	-		AO353_23210	0.30	-0.2
5,092,613	-		AO353_23210	0.30	+0.4
5,092,921	+		AO353_23210	0.44	+2.1
5,092,921	+		AO353_23210	0.44	-0.9
5,092,922	-		AO353_23210	0.44	+0.5
5,092,922	-		AO353_23210	0.44	-1.0
5,092,922	-		AO353_23210	0.44	+0.5
5,092,922	-		AO353_23210	0.44	-0.2
5,092,922	-		AO353_23210	0.44	-0.9
5,093,015	+		AO353_23210	0.48	+0.1
5,093,016	-		AO353_23210	0.48	+1.1
5,093,016	-		AO353_23210	0.48	+0.6
5,093,098	+		AO353_23210	0.52	-1.1
5,093,098	+		AO353_23210	0.52	-0.0
5,093,098	+		AO353_23210	0.52	+0.1
5,093,098	+		AO353_23210	0.52	-0.2
5,093,099	-		AO353_23210	0.52	-0.1
5,093,099	-		AO353_23210	0.52	-0.9
5,093,099	-		AO353_23210	0.52	-2.2
5,093,253	+		AO353_23210	0.59	+0.1
5,093,254	-		AO353_23210	0.59	+0.2
5,093,310	+		AO353_23210	0.62	-1.5
5,093,310	+		AO353_23210	0.62	-0.5
5,093,310	+		AO353_23210	0.62	+0.5
5,093,311	-		AO353_23210	0.62	-0.2
5,093,348	+		AO353_23210	0.63	-0.1
5,093,348	+		AO353_23210	0.63	-0.9
5,093,348	+		AO353_23210	0.63	-0.8
5,093,349	-		AO353_23210	0.64	-0.5
5,093,716	+		AO353_23210	0.80	+0.7
5,093,716	+		AO353_23210	0.80	+1.1
5,093,716	+		AO353_23210	0.80	+0.3
5,093,717	-		AO353_23210	0.80	+2.7
5,093,717	-		AO353_23210	0.80	-0.0
5,094,030	+				+0.1
5,094,030	+				-0.9
5,094,061	+				-0.5
5,094,061	+				+0.3
5,094,061	+				+0.5
5,094,061	+				+0.3
5,094,061	+				-0.2
5,094,062	-				+1.1
5,094,070	-				-0.9
5,094,151	+				-0.3
5,094,253	+				-0.3
5,094,253	+				+1.1
5,094,290	-				-0.5
5,094,326	+				-0.5
5,094,326	+				-0.5
5,094,326	+				-3.1
5,094,342	+				+0.9
5,094,343	-				-1.5
5,094,343	-				+0.8
5,094,434	-		AO353_23215	0.22	-0.5
5,094,443	+				-1.7
5,094,443	+		AO353_23215	0.24	-1.1
5,094,444	-		AO353_23215	0.24	-0.3
5,094,573	+		AO353_23215	0.54	-0.4
5,094,573	+		AO353_23215	0.54	-0.2
5,094,574	-		AO353_23215	0.55	+0.4
5,094,574	-		AO353_23215	0.55	+0.7
5,094,772	+				-0.8
5,094,773	-				+0.1
5,094,773	-				-1.6
5,094,773	-				+0.4
5,094,808	+				+0.1
5,094,872	-		AO353_23220	0.22	-0.4
5,094,885	-		AO353_23220	0.26	+0.3
5,094,954	+		AO353_23220	0.49	-1.4
5,094,968	-		AO353_23220	0.54	-0.4
5,094,998	-		AO353_23220	0.64	+0.5
5,095,082	-				+0.4
5,095,120	+				-0.5
5,095,120	+				+0.0
5,095,120	+				-0.4
5,095,142	+				+0.5
5,095,142	+				-1.1
5,095,143	-				+0.4
5,095,152	-				-0.7
5,095,152	-				-1.7