Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18170

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
3,997,991	+				-2.0
3,997,991	+				-0.4
3,997,992	-				-0.5
3,997,992	-				-0.2
3,998,037	-				+1.9
3,998,037	-				+0.3
3,998,066	-				+0.4
3,998,175	+				+0.2
3,998,176	-				+0.3
3,998,253	-				-0.2
3,998,372	+				-0.0
3,998,372	+				+0.2
3,998,372	+				-0.2
3,998,373	-				-1.2
3,998,373	-				-1.3
3,998,373	-				-1.0
3,998,373	-				-0.3
3,998,373	-				+0.3
3,998,555	+				+1.9
3,998,555	+				-0.4
3,998,555	+				-1.0
3,998,555	+				+0.3
3,998,555	+				+0.3
3,998,555	+				+0.8
3,998,555	+				-0.8
3,998,555	+				+1.0
3,998,555	+				-0.5
3,998,556	-				-0.2
3,998,556	-				-0.2
3,998,556	-				-0.2
3,998,556	-				+0.6
3,998,556	-				-1.8
3,998,556	-				+0.3
3,998,556	-				-2.1
3,998,556	-				-1.7
3,998,558	-				-0.1
3,998,558	-				+0.6
3,998,558	-				-1.1
3,998,641	+				+1.1
3,998,641	+				+0.8
3,998,641	+				-0.2
3,998,641	+				-0.0
3,998,641	+				-0.6
3,998,642	-				-0.4
3,998,642	-				-0.7
3,998,662	+				-0.1
3,998,663	-				+0.9
3,998,663	-				-0.2
3,998,676	+				-0.6
3,998,676	+				+0.5
3,998,676	+				-0.6
3,998,676	+				-0.8
3,998,676	+				-3.0
3,998,676	+				+1.3
3,998,677	-				+0.3
3,998,677	-				-0.2
3,998,677	-				+0.6
3,998,677	-				+0.8
3,998,677	-				-2.1
3,998,677	-				+0.6
3,998,686	+				+0.3
3,998,686	+				-0.1
3,998,687	-				-2.0
3,998,694	+				+0.9
3,998,695	-				-0.5
3,998,695	-				-0.9
3,998,695	-				+0.7
3,998,695	-				-0.2
3,998,695	-				+1.0
3,998,699	+				-0.8
3,998,699	+				+0.9
3,998,699	+				-0.2
3,998,699	+				-2.0
3,998,699	+				-0.4
3,998,699	+				+0.8
3,998,699	+				+0.6
3,998,700	-				+0.8
3,998,700	-				-0.2
3,998,700	-				+0.9
3,998,700	-				-0.7
3,998,744	+				-1.0
3,998,841	+				+0.6
3,998,841	+				-2.6
3,998,841	+				+1.6
3,998,849	+				+0.3
3,998,850	-				-0.4
3,998,850	-				-1.1
3,998,850	-				-0.8
3,998,850	-				-0.4
3,998,872	+				+0.1
3,998,890	+				+0.0
3,998,890	+				-0.5
3,998,890	+				-0.8
3,998,891	-				-1.2
3,998,891	-				-1.2
3,998,921	+				+1.0
3,998,921	+				+1.8
3,998,922	-				+0.0
3,999,050	+				-1.0
3,999,050	+				-1.3
3,999,050	+				-2.2
3,999,051	-				-1.1
3,999,051	-				-0.3
3,999,125	+		AO353_18170	0.14	-0.6
3,999,125	+		AO353_18170	0.14	-1.0
3,999,125	+		AO353_18170	0.14	-0.4
3,999,125	+		AO353_18170	0.14	-0.9
3,999,126	-		AO353_18170	0.14	-1.8
3,999,126	-		AO353_18170	0.14	-0.2
3,999,126	-		AO353_18170	0.14	-0.8
3,999,126	-		AO353_18170	0.14	-1.5
3,999,128	-		AO353_18170	0.15	-1.2
3,999,140	+		AO353_18170	0.16	-0.3
3,999,140	+		AO353_18170	0.16	-3.3
3,999,140	+		AO353_18170	0.16	-0.9
3,999,141	-		AO353_18170	0.16	-2.0
3,999,170	+		AO353_18170	0.19	-1.6
3,999,263	+		AO353_18170	0.29	-1.4
3,999,263	+		AO353_18170	0.29	+0.8
3,999,263	+		AO353_18170	0.29	+0.8
3,999,263	+		AO353_18170	0.29	-2.2
3,999,264	-		AO353_18170	0.29	-0.0
3,999,264	-		AO353_18170	0.29	-1.1
3,999,286	+		AO353_18170	0.32	+0.8
3,999,335	+		AO353_18170	0.37	-0.2
3,999,335	+		AO353_18170	0.37	+0.2
3,999,335	+		AO353_18170	0.37	-1.8
3,999,336	-		AO353_18170	0.37	-2.8
3,999,348	-		AO353_18170	0.38	-2.2
3,999,348	-		AO353_18170	0.38	+0.0
3,999,563	+		AO353_18170	0.61	-0.0
3,999,564	-		AO353_18170	0.61	-0.0
3,999,605	+		AO353_18170	0.65	-2.6
3,999,605	+		AO353_18170	0.65	-1.4
3,999,605	+		AO353_18170	0.65	-0.0
3,999,605	+		AO353_18170	0.65	-1.0
3,999,605	+		AO353_18170	0.65	-1.9
3,999,606	-		AO353_18170	0.66	-2.4
3,999,606	-		AO353_18170	0.66	-1.2
3,999,698	-		AO353_18170	0.75	-0.1
3,999,785	+		AO353_18170	0.85	-1.0
3,999,785	+		AO353_18170	0.85	-0.5
3,999,785	+		AO353_18170	0.85	-0.2
3,999,786	-		AO353_18170	0.85	-1.1
3,999,786	-		AO353_18170	0.85	-2.0
3,999,848	-				+0.6
3,999,880	-				-0.6
3,999,929	+				-0.2
3,999,930	-				-0.2
4,000,082	+				+0.3
4,000,082	+				+1.3
4,000,082	+				-0.2
4,000,082	+				-0.4
4,000,082	+				-0.3
4,000,083	-				-0.4
4,000,083	-				-0.8
4,000,097	+				+0.3
4,000,097	+				-1.6
4,000,097	+				-0.7
4,000,098	-				-0.3
4,000,110	+				-2.0
4,000,110	+				-0.2
4,000,136	+				-1.2
4,000,136	+				-0.0
4,000,136	+				-0.1
4,000,136	+				+0.4
4,000,136	+				-0.3
4,000,136	+				-0.2
4,000,136	+				-0.2
4,000,136	+				+0.0
4,000,137	-				-0.3
4,000,137	-				+0.7
4,000,137	-				+0.7
4,000,137	-				+0.8
4,000,137	-				+0.8
4,000,152	-				+0.6
4,000,164	-				-1.6
4,000,164	-				-0.3
4,000,169	+				+0.2
4,000,169	+				+0.1
4,000,184	+				-0.6
4,000,235	+				+0.7
4,000,236	-				-0.4
4,000,281	+				-0.4
4,000,283	+				+0.6
4,000,283	+				-0.5
4,000,283	+				-0.4
4,000,283	+				+0.6
4,000,283	+				-0.0
4,000,283	+				-1.0
4,000,284	-				+0.3
4,000,284	-				-0.8
4,000,284	-				-1.4
4,000,284	-				-0.1
4,000,410	+				+0.6
4,000,410	+				-0.4
4,000,671	+				+1.2
4,000,819	+		AO353_18175	0.25	-0.4
4,000,819	+		AO353_18175	0.25	+0.1
4,000,819	+		AO353_18175	0.25	-0.3
4,000,819	+		AO353_18175	0.25	-0.4
4,000,819	+		AO353_18175	0.25	+1.0
4,000,820	-		AO353_18175	0.25	+0.7
4,000,820	-		AO353_18175	0.25	-0.1
4,000,842	-		AO353_18175	0.28	+0.3
4,000,842	-		AO353_18175	0.28	-0.2
4,000,842	-		AO353_18175	0.28	-0.2
4,000,867	+		AO353_18175	0.31	-1.0
4,000,867	+		AO353_18175	0.31	-0.4
4,000,893	+		AO353_18175	0.34	+1.1