Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14765 and AO353_14770 are separated by 1 nucleotides AO353_14770 and AO353_14775 are separated by 4 nucleotides AO353_14775 and AO353_14780 are separated by 216 nucleotides
AO353_14765: AO353_14765 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,270,107 to 3,270,958
_14765
AO353_14770: AO353_14770 - outer membrane lipoprotein LolB, at 3,270,960 to 3,271,577
_14770
AO353_14775: AO353_14775 - hypothetical protein, at 3,271,582 to 3,273,306
_14775
AO353_14780: AO353_14780 - glutamyl-tRNA reductase, at 3,273,523 to 3,274,812
_14780
Position (kb)
3271
3272
3273
3274 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.887 kb on - strand, within AO353_14775 at 3272.026 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.133 kb on - strand, within AO353_14775 at 3272.250 kb on - strand, within AO353_14775 at 3272.277 kb on - strand, within AO353_14775 at 3272.436 kb on - strand, within AO353_14775 at 3272.436 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.907 kb on - strand, within AO353_14775 at 3272.992 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.307 kb on - strand at 3273.324 kb on - strand at 3273.324 kb on - strand at 3273.367 kb on + strand at 3273.367 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.438 kb on + strand at 3273.438 kb on + strand at 3273.439 kb on - strand at 3273.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0008 mg/ml remove 3,271,584 - +0.6 3,271,584 - +1.3 3,271,584 - -0.5 3,271,584 - -0.1 3,271,767 - AO353_14775 0.11 -1.9 3,271,767 - AO353_14775 0.11 -1.9 3,271,767 - AO353_14775 0.11 -0.9 3,271,767 - AO353_14775 0.11 -1.6 3,271,767 - AO353_14775 0.11 -2.0 3,271,887 - AO353_14775 0.18 -0.7 3,272,026 - AO353_14775 0.26 -2.2 3,272,028 - AO353_14775 0.26 -0.3 3,272,028 - AO353_14775 0.26 -3.2 3,272,028 - AO353_14775 0.26 -0.5 3,272,028 - AO353_14775 0.26 -0.7 3,272,133 - AO353_14775 0.32 -1.3 3,272,250 - AO353_14775 0.39 -2.0 3,272,277 - AO353_14775 0.40 -1.1 3,272,436 - AO353_14775 0.50 -2.4 3,272,436 - AO353_14775 0.50 -2.9 3,272,532 - AO353_14775 0.55 -0.1 3,272,532 - AO353_14775 0.55 -1.1 3,272,532 - AO353_14775 0.55 -2.0 3,272,532 - AO353_14775 0.55 +0.5 3,272,532 - AO353_14775 0.55 -0.9 3,272,532 - AO353_14775 0.55 -1.1 3,272,532 - AO353_14775 0.55 -0.9 3,272,532 - AO353_14775 0.55 -1.5 3,272,532 - AO353_14775 0.55 -0.7 3,272,889 - AO353_14775 0.76 -1.4 3,272,889 - AO353_14775 0.76 -1.1 3,272,889 - AO353_14775 0.76 -2.3 3,272,889 - AO353_14775 0.76 -2.7 3,272,889 - AO353_14775 0.76 -1.5 3,272,889 - AO353_14775 0.76 -1.7 3,272,907 - AO353_14775 0.77 -1.8 3,272,992 - AO353_14775 0.82 -2.9 3,273,087 - AO353_14775 0.87 -1.7 3,273,087 - AO353_14775 0.87 -2.5 3,273,087 - AO353_14775 0.87 -2.5 3,273,301 - -0.8 3,273,301 - -1.1 3,273,301 - -1.8 3,273,301 - +0.3 3,273,301 - +0.3 3,273,301 - -0.5 3,273,301 - -1.1 3,273,301 - -1.3 3,273,301 - -2.3 3,273,301 - +0.5 3,273,301 - -1.8 3,273,307 - -0.5 3,273,324 - -1.6 3,273,324 - -0.2 3,273,367 + +0.3 3,273,367 + -1.3 3,273,423 + -0.9 3,273,423 + +0.3 3,273,423 + -1.2 3,273,423 + -0.4 3,273,423 + -0.8 3,273,423 + -0.9 3,273,423 + -0.6 3,273,423 + +1.1 3,273,425 + -1.5 3,273,425 + -0.1 3,273,425 + +0.6 3,273,425 + -0.4 3,273,425 + +0.1 3,273,425 + +0.7 3,273,425 + -0.6 3,273,425 + -0.8 3,273,425 + +2.5 3,273,425 + -2.0 3,273,425 + -0.3 3,273,425 + -0.3 3,273,425 + -1.3 3,273,425 + -1.9 3,273,426 - -1.9 3,273,426 - -0.9 3,273,426 - -0.9 3,273,426 - -1.1 3,273,426 - -0.2 3,273,426 - -0.5 3,273,427 + -1.7 3,273,427 + -0.0 3,273,427 + -0.9 3,273,427 + -0.5 3,273,427 + -3.0 3,273,427 + +0.3 3,273,427 + -1.5 3,273,427 + -1.0 3,273,427 + +2.9 3,273,427 + -1.3 3,273,427 + -1.7 3,273,427 + +0.3 3,273,427 + -0.9 3,273,427 + -0.7 3,273,427 + -1.6 3,273,427 + +0.9 3,273,427 + -2.1 3,273,427 + +0.3 3,273,427 + -1.7 3,273,427 + -0.7 3,273,427 + -2.2 3,273,427 + -2.0 3,273,427 + -1.1 3,273,427 + -1.0 3,273,427 + -2.2 3,273,427 + -0.9 3,273,428 - -1.6 3,273,428 - -1.6 3,273,428 - -0.7 3,273,428 - -1.1 3,273,428 - -0.8 3,273,428 - -1.6 3,273,428 - +0.3 3,273,428 - -1.9 3,273,428 - -0.7 3,273,428 - -0.1 3,273,428 - +0.8 3,273,428 - +0.5 3,273,428 - -0.3 3,273,438 + -0.7 3,273,438 + -1.0 3,273,439 - -1.9 3,273,449 + +0.1
Or see this region's nucleotide sequence