Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08765

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
1,927,481	+		AO353_08760	0.28	-0.5
1,927,482	-		AO353_08760	0.28	+0.3
1,927,482	-		AO353_08760	0.28	-0.0
1,927,485	+		AO353_08760	0.28	-1.7
1,927,485	+		AO353_08760	0.28	-1.5
1,927,485	+		AO353_08760	0.28	-1.3
1,927,485	+		AO353_08760	0.28	-0.2
1,927,485	+		AO353_08760	0.28	+0.1
1,927,485	+		AO353_08760	0.28	-0.9
1,927,486	-		AO353_08760	0.28	-0.3
1,927,486	-		AO353_08760	0.28	-2.0
1,927,486	-		AO353_08760	0.28	-0.4
1,927,486	-		AO353_08760	0.28	-0.9
1,927,486	-		AO353_08760	0.28	+1.1
1,927,576	+		AO353_08760	0.35	-1.1
1,927,576	+		AO353_08760	0.35	-0.9
1,927,577	-		AO353_08760	0.35	+0.5
1,927,577	-		AO353_08760	0.35	+1.6
1,927,577	-		AO353_08760	0.35	+0.8
1,927,600	+		AO353_08760	0.37	-1.0
1,927,600	+		AO353_08760	0.37	-1.3
1,927,600	+		AO353_08760	0.37	+0.7
1,927,600	+		AO353_08760	0.37	+1.3
1,927,601	-		AO353_08760	0.37	-0.5
1,927,601	-		AO353_08760	0.37	-0.0
1,927,601	-		AO353_08760	0.37	+1.4
1,927,642	+		AO353_08760	0.40	+1.2
1,927,643	-		AO353_08760	0.40	-0.9
1,927,715	-		AO353_08760	0.45	-0.1
1,927,715	-		AO353_08760	0.45	-0.5
1,927,759	+		AO353_08760	0.49	+0.9
1,927,920	-		AO353_08760	0.61	-1.3
1,927,920	-		AO353_08760	0.61	+0.2
1,928,062	+		AO353_08760	0.71	-0.8
1,928,062	+		AO353_08760	0.71	+0.1
1,928,062	+		AO353_08760	0.71	-1.1
1,928,063	-		AO353_08760	0.71	+0.4
1,928,063	-		AO353_08760	0.71	-0.5
1,928,224	+		AO353_08760	0.83	-1.5
1,928,224	+		AO353_08760	0.83	+0.1
1,928,224	+		AO353_08760	0.83	-0.7
1,928,224	+		AO353_08760	0.83	+0.6
1,928,224	+		AO353_08760	0.83	+0.2
1,928,224	+		AO353_08760	0.83	-0.8
1,928,224	+		AO353_08760	0.83	-0.1
1,928,224	+		AO353_08760	0.83	-0.1
1,928,224	+		AO353_08760	0.83	+0.3
1,928,224	+		AO353_08760	0.83	-1.4
1,928,225	-		AO353_08760	0.84	-0.2
1,928,225	-		AO353_08760	0.84	-0.0
1,928,225	-		AO353_08760	0.84	-0.3
1,928,225	-		AO353_08760	0.84	+0.4
1,928,225	-		AO353_08760	0.84	-0.5
1,928,225	-		AO353_08760	0.84	-1.6
1,928,225	-		AO353_08760	0.84	-0.7
1,928,225	-		AO353_08760	0.84	+0.1
1,928,225	-		AO353_08760	0.84	+0.3
1,928,225	-		AO353_08760	0.84	-1.3
1,928,225	-		AO353_08760	0.84	+0.7
1,928,225	-		AO353_08760	0.84	-1.9
1,928,247	+		AO353_08760	0.85	+0.1
1,928,248	-		AO353_08760	0.85	-1.6
1,928,248	-		AO353_08760	0.85	-0.1
1,928,248	-		AO353_08760	0.85	+0.2
1,928,291	-		AO353_08760	0.88	-0.1
1,928,419	+				-0.6
1,928,419	+				-1.1
1,928,420	-				+0.1
1,928,429	+				-1.5
1,928,430	-				-2.3
1,928,435	+				+0.3
1,928,436	-				+0.1
1,928,436	-				+0.7
1,928,436	-				-0.1
1,928,551	+		AO353_08765	0.14	-1.6
1,928,551	+		AO353_08765	0.14	-1.5
1,928,551	+		AO353_08765	0.14	-2.4
1,928,551	+		AO353_08765	0.14	-0.1
1,928,552	-		AO353_08765	0.14	-0.4
1,928,552	-		AO353_08765	0.14	+0.5
1,928,552	-		AO353_08765	0.14	-0.4
1,928,567	+		AO353_08765	0.17	-1.4
1,928,567	+		AO353_08765	0.17	+0.1
1,928,567	+		AO353_08765	0.17	-1.8
1,928,568	-		AO353_08765	0.17	-2.4
1,928,568	-		AO353_08765	0.17	+0.6
1,928,568	-		AO353_08765	0.17	-0.5
1,928,568	-		AO353_08765	0.17	-0.7
1,928,568	-		AO353_08765	0.17	+0.4
1,928,569	+		AO353_08765	0.17	-1.8
1,928,569	+		AO353_08765	0.17	-0.1
1,928,569	+		AO353_08765	0.17	+0.1
1,928,569	+		AO353_08765	0.17	-1.6
1,928,570	-		AO353_08765	0.18	-0.5
1,928,570	-		AO353_08765	0.18	+0.8
1,928,570	-		AO353_08765	0.18	+1.1
1,928,570	-		AO353_08765	0.18	+0.1
1,929,037	+				+0.5
1,929,054	+				-0.1
1,929,054	+				-1.3
1,929,055	-				+0.3
1,929,055	-				-1.3
1,929,060	+				-1.1
1,929,061	-				-0.9
1,929,076	+				-1.4
1,929,076	+				-1.2
1,929,076	+				+0.1
1,929,076	+				-0.6
1,929,076	+				-0.4
1,929,077	-				-0.4
1,929,077	-				+1.3
1,929,077	-				+0.4
1,929,077	-				-1.0
1,929,077	-				+1.3
1,929,077	-				-0.0
1,929,077	-				+0.5
1,929,077	-				-1.7
1,929,081	+				-1.4
1,929,081	+				-1.3
1,929,081	+				-1.0
1,929,082	-				-0.9
1,929,082	-				+0.7
1,929,082	-				-0.2
1,929,082	-				-0.9
1,929,082	-				+0.5
1,929,082	-				-0.3
1,929,082	-				-1.4
1,929,082	-				+0.5
1,929,082	-				-0.1
1,929,082	-				-0.5
1,929,082	-				+1.3
1,929,082	-				-0.7
1,929,082	-				-1.9
1,929,104	+				+0.6
1,929,104	+				-0.3
1,929,105	-				+1.7
1,929,105	-				-0.3
1,929,105	-				-0.3
1,929,105	-				-0.9
1,929,107	+				-0.7
1,929,107	+				-0.0
1,929,107	+				-1.3
1,929,108	-				+0.4
1,929,108	-				-0.1
1,929,108	-				+0.3
1,929,108	-				+0.5
1,929,108	-				-1.5
1,929,125	+				+1.5
1,929,157	+				+0.1
1,929,157	+				-0.1
1,929,157	+				+1.5
1,929,157	+				-0.8
1,929,158	-				-1.6
1,929,158	-				+0.7
1,929,158	-				+0.5
1,929,158	-				+1.8
1,929,158	-				+0.7
1,929,158	-				+0.1
1,929,158	-				+0.1
1,929,158	-				-0.5
1,929,158	-				-0.7
1,929,158	-				-1.1
1,929,158	-				-1.3
1,929,158	-				-0.7
1,929,158	-				-1.2
1,929,204	+		AO353_08770	0.22	+0.1
1,929,204	+		AO353_08770	0.22	-0.2
1,929,204	+		AO353_08770	0.22	-1.8
1,929,204	+		AO353_08770	0.22	+1.2
1,929,204	+		AO353_08770	0.22	-1.4
1,929,204	+		AO353_08770	0.22	+0.3
1,929,204	+		AO353_08770	0.22	+0.7
1,929,204	+		AO353_08770	0.22	-0.4
1,929,204	+		AO353_08770	0.22	-1.1
1,929,204	+		AO353_08770	0.22	-0.7
1,929,204	+		AO353_08770	0.22	-0.5
1,929,204	+		AO353_08770	0.22	-0.1
1,929,204	+		AO353_08770	0.22	+0.2
1,929,204	+		AO353_08770	0.22	+0.1
1,929,204	+		AO353_08770	0.22	+0.6
1,929,204	+		AO353_08770	0.22	-0.3
1,929,205	-		AO353_08770	0.22	-0.2
1,929,205	-		AO353_08770	0.22	-0.1
1,929,205	-		AO353_08770	0.22	-0.1
1,929,205	-				-0.5
1,929,205	-		AO353_08770	0.22	+1.3
1,929,205	-		AO353_08770	0.22	+0.5
1,929,205	-		AO353_08770	0.22	-0.6
1,929,205	-		AO353_08770	0.22	+0.3
1,929,205	-		AO353_08770	0.22	+0.3
1,929,205	-		AO353_08770	0.22	+1.1
1,929,205	-		AO353_08770	0.22	+2.1
1,929,205	-		AO353_08770	0.22	+1.6
1,929,205	-		AO353_08770	0.22	+0.3
1,929,208	+		AO353_08770	0.24	+0.2
1,929,226	+		AO353_08770	0.32	+0.5
1,929,226	+		AO353_08770	0.32	-0.5
1,929,226	+		AO353_08770	0.32	-0.3
1,929,226	+		AO353_08770	0.32	-0.3
1,929,226	+		AO353_08770	0.32	-1.1
1,929,226	+		AO353_08770	0.32	+0.1
1,929,226	+		AO353_08770	0.32	-1.3
1,929,226	+		AO353_08770	0.32	-0.2
1,929,227	-		AO353_08770	0.33	+1.1
1,929,227	-		AO353_08770	0.33	+0.5
1,929,227	-		AO353_08770	0.33	+0.1
1,929,227	-		AO353_08770	0.33	-1.4
1,929,227	-		AO353_08770	0.33	+0.5
1,929,227	-		AO353_08770	0.33	+1.4
1,929,227	-		AO353_08770	0.33	+0.5
1,929,227	-		AO353_08770	0.33	-1.8
1,929,227	-		AO353_08770	0.33	-0.4
1,929,227	-		AO353_08770	0.33	+0.1
1,929,227	-		AO353_08770	0.33	+0.4
1,929,227	-		AO353_08770	0.33	+0.1
1,929,227	-		AO353_08770	0.33	-0.5
1,929,246	+		AO353_08770	0.42	+0.8
1,929,246	+		AO353_08770	0.42	-0.9
1,929,246	+		AO353_08770	0.42	-0.6
1,929,246	+		AO353_08770	0.42	-0.2
1,929,246	+		AO353_08770	0.42	-0.3
1,929,246	+		AO353_08770	0.42	-0.0
1,929,246	+		AO353_08770	0.42	+1.1
1,929,246	+		AO353_08770	0.42	-1.1
1,929,247	-		AO353_08770	0.42	+0.3
1,929,247	-		AO353_08770	0.42	+1.1
1,929,247	-		AO353_08770	0.42	+1.8
1,929,247	-		AO353_08770	0.42	+1.1
1,929,247	-		AO353_08770	0.42	-0.5
1,929,247	-		AO353_08770	0.42	-2.0
1,929,247	-		AO353_08770	0.42	-0.5
1,929,247	-		AO353_08770	0.42	+0.5
1,929,247	-		AO353_08770	0.42	+0.7
1,929,249	+		AO353_08770	0.43	-1.2
1,929,249	+		AO353_08770	0.43	-1.6
1,929,249	+		AO353_08770	0.43	-0.7
1,929,249	+		AO353_08770	0.43	+0.6
1,929,249	+		AO353_08770	0.43	-0.3
1,929,249	+		AO353_08770	0.43	+0.1
1,929,249	+		AO353_08770	0.43	-0.3
1,929,249	+		AO353_08770	0.43	-0.3
1,929,249	+		AO353_08770	0.43	-0.3
1,929,249	+		AO353_08770	0.43	-0.9
1,929,250	-		AO353_08770	0.44	+1.8
1,929,250	-		AO353_08770	0.44	-0.4
1,929,250	-		AO353_08770	0.44	+0.3
1,929,250	-		AO353_08770	0.44	+1.4
1,929,250	-		AO353_08770	0.44	-0.1
1,929,250	-		AO353_08770	0.44	-0.3
1,929,250	-		AO353_08770	0.44	+0.3
1,929,250	-		AO353_08770	0.44	-1.6
1,929,250	-		AO353_08770	0.44	+0.5
1,929,250	-		AO353_08770	0.44	-0.1
1,929,250	-		AO353_08770	0.44	+0.6
1,929,316	+		AO353_08770	0.75	+0.0
1,929,317	-		AO353_08770	0.76	-0.5
1,929,317	-		AO353_08770	0.76	+1.8
1,929,378	+				+0.9
1,929,378	+				-0.9
1,929,378	+				-1.3
1,929,378	+				+1.1
1,929,378	+				-0.3
1,929,378	+				-0.4
1,929,378	+				+0.7
1,929,379	-				-0.3
1,929,379	-				+0.4
1,929,384	+				+0.5
1,929,384	+				+0.1
1,929,409	+		AO353_08775	0.14	+0.9
1,929,409	+		AO353_08775	0.14	-1.2
1,929,409	+		AO353_08775	0.14	+0.2
1,929,410	-		AO353_08775	0.14	+0.8
1,929,701	+				-0.3
1,929,703	+				-0.4
1,929,703	+				-0.4
1,929,704	-				-0.2
1,929,704	-				+0.1
1,929,704	-				-0.1
1,929,802	+				-1.1
1,929,816	+				+0.8
1,929,823	+				-1.5
1,929,823	+				-1.3
1,929,823	+				-2.5
1,929,823	+				-0.7
1,929,823	+				-1.8
1,929,823	+				+1.0
1,929,823	+				-0.5
1,929,823	+				-0.7
1,929,824	-				-0.4
1,929,824	-				+0.1
1,929,824	-				+0.7
1,929,824	-				+0.5
1,929,824	-				-0.5
1,929,824	-				-0.2
1,929,824	-				-1.6
1,929,861	+				-1.2
1,929,861	+				-1.4
1,929,862	-				-0.3
1,929,890	+				-0.3
1,929,890	+				-0.6
1,929,890	+				-1.0
1,929,890	+				+0.4
1,929,890	+				+0.6
1,929,890	+				-0.7
1,929,890	+				+0.3
1,929,890	+				+0.8
1,929,890	+				+1.0
1,929,890	+				+0.3
1,929,890	+				-0.5
1,929,890	+				-0.9
1,929,890	+				+1.3
1,929,891	-				+0.2
1,929,891	-				-0.4
1,929,891	-				-0.1
1,929,891	-				-0.7
1,929,891	-				-0.4
1,929,891	-				-0.4
1,929,891	-				+0.4
1,929,891	-				-1.4
1,929,891	-				+0.8
1,929,891	-				+1.5
1,929,891	-				+0.5
1,929,891	-				-0.7
1,929,891	-				+0.4
1,929,891	-				+1.5
1,929,891	-				+0.3
1,929,891	-				+0.1
1,929,891	-				+0.3
1,929,891	-				+1.1
1,929,891	-				+0.2
1,929,891	-				+1.4
1,929,892	+				-0.7
1,929,892	+				-0.3
1,929,892	+				-1.1
1,929,892	+				+0.3
1,929,892	+				-0.3
1,929,892	+				+0.1
1,929,892	+				-0.5
1,929,892	+				+0.4
1,929,893	-				+0.4
1,929,893	-				+0.7
1,929,893	-				-1.1
1,929,931	+				+0.7
1,929,931	+				-0.0
1,929,931	+				-0.7
1,929,931	+				-1.1
1,929,931	+				+0.5
1,929,931	+				-0.7
1,929,931	+				-1.2
1,929,931	+				+0.9
1,929,931	+				-0.5
1,929,931	+				-0.6