Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07560

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
1,663,763	+		AO353_07555	0.42	-1.4
1,663,763	+		AO353_07555	0.42	-0.4
1,663,763	+		AO353_07555	0.42	+0.2
1,663,763	+		AO353_07555	0.42	+1.3
1,663,764	-		AO353_07555	0.42	-0.2
1,663,978	+		AO353_07555	0.83	+0.3
1,663,978	+		AO353_07555	0.83	-0.6
1,663,979	-		AO353_07555	0.83	+0.1
1,663,979	-		AO353_07555	0.83	+0.4
1,663,979	-		AO353_07555	0.83	-1.2
1,664,043	-				-0.6
1,664,051	+				-0.9
1,664,051	+				-0.7
1,664,052	-				-1.2
1,664,052	-				-0.0
1,664,096	+				+0.6
1,664,096	+				+0.1
1,664,096	+				-0.3
1,664,096	+				-0.5
1,664,096	+				+1.9
1,664,096	+				+0.7
1,664,097	-				+0.5
1,664,097	-				+0.2
1,664,097	-				-1.5
1,664,097	-				+0.5
1,664,108	+				+0.5
1,664,108	+				-1.7
1,664,108	+				+0.6
1,664,108	+				-0.8
1,664,108	+				+1.1
1,664,108	+				+0.1
1,664,108	+				-0.4
1,664,109	-				-0.6
1,664,109	-				+0.0
1,664,109	-				+0.6
1,664,109	-				-0.4
1,664,109	-				+0.3
1,664,109	-				+0.8
1,664,109	-				+1.9
1,664,109	-				-0.4
1,664,109	-				+0.0
1,664,109	-				+0.7
1,664,109	-				+0.5
1,664,110	+				-0.6
1,664,110	+				-0.1
1,664,110	+				-0.4
1,664,110	+				-1.2
1,664,110	+				+0.8
1,664,111	-				+0.8
1,664,111	-				+0.4
1,664,111	-				+0.3
1,664,111	-				+0.8
1,664,111	-				-0.2
1,664,111	-				+0.3
1,664,111	-				+1.1
1,664,111	-				+0.6
1,664,111	-				+1.0
1,664,111	-				+0.9
1,664,159	-				+0.3
1,664,176	+				-0.3
1,664,176	+				+0.1
1,664,176	+				+0.6
1,664,176	+				-0.1
1,664,177	-				+0.6
1,664,177	-				-1.0
1,664,177	-				-0.9
1,664,177	-				-0.1
1,664,177	-				+0.3
1,664,177	-				+1.9
1,664,183	-				+0.9
1,664,216	-				+0.3
1,664,281	-				+0.6
1,664,284	+				-0.9
1,664,284	+				+1.1
1,664,284	+				-0.1
1,664,284	+				-0.0
1,664,284	+				+0.2
1,664,284	+				+0.3
1,664,285	-				-0.0
1,664,285	-				-0.1
1,664,285	-				+0.4
1,664,285	-				-0.2
1,664,285	-				+0.9
1,664,285	-				-0.3
1,664,285	-				-0.2
1,664,285	-				+1.3
1,664,316	+				-0.6
1,664,316	+				+1.5
1,664,316	+				+0.3
1,664,316	+				-1.8
1,664,316	+				-0.4
1,664,316	+				-0.2
1,664,317	-				-0.4
1,664,317	-				-1.1
1,664,317	-				-1.2
1,664,317	-				+0.1
1,664,317	-				-0.2
1,664,317	-				-1.4
1,664,317	-				-0.2
1,664,317	-				-0.3
1,664,317	-				-1.7
1,664,319	+				-2.5
1,664,320	-				-0.4
1,664,336	+				+1.2
1,664,336	+				+1.6
1,664,336	+				+0.6
1,664,336	+				+1.1
1,664,337	-				-0.7
1,664,337	-				-1.0
1,664,337	-				+0.3
1,664,337	-				-2.0
1,664,337	-				-0.3
1,664,337	-				+0.3
1,664,340	+				-0.4
1,664,340	+				+0.3
1,664,340	+				+0.4
1,664,341	-				-0.5
1,664,341	-				-0.1
1,664,341	-				+1.3
1,664,404	-				-2.7
1,664,445	+				-0.1
1,664,445	+				-1.2
1,664,445	+				-1.2
1,664,445	+				-0.8
1,664,445	+				+0.1
1,664,445	+				+1.0
1,664,445	+				-0.4
1,664,445	+				+1.1
1,664,445	+				-0.1
1,664,445	+				+0.0
1,664,445	+				+0.6
1,664,446	-				-2.2
1,664,446	-				-0.5
1,664,446	-				-0.3
1,664,446	-				+1.9
1,664,446	-				-1.3
1,664,446	-				+0.3
1,664,446	-				-0.2
1,664,446	-				-0.3
1,664,451	+				-0.2
1,664,452	-				-1.3
1,664,452	-				-0.9
1,664,468	+				-0.3
1,664,469	-				-0.7
1,664,516	+				-1.5
1,664,516	+				-0.6
1,664,517	-				-1.1
1,664,517	-				+0.2
1,664,517	-				-0.7
1,664,728	+				-0.4
1,664,729	-				+0.6
1,664,729	-				+0.7
1,664,729	-				+0.6
1,664,780	+		AO353_07560	0.11	-0.9
1,664,780	+		AO353_07560	0.11	+0.9
1,664,780	+		AO353_07560	0.11	-0.8
1,664,780	+		AO353_07560	0.11	+0.7
1,664,780	+				-0.4
1,664,780	+		AO353_07560	0.11	-0.1
1,664,780	+		AO353_07560	0.11	-0.6
1,664,780	+		AO353_07560	0.11	-1.2
1,664,780	+		AO353_07560	0.11	-2.2
1,664,781	-		AO353_07560	0.11	+0.9
1,664,781	-		AO353_07560	0.11	-0.9
1,664,781	-		AO353_07560	0.11	+0.5
1,664,782	+		AO353_07560	0.11	-0.0
1,664,782	+		AO353_07560	0.11	+1.3
1,664,782	+		AO353_07560	0.11	-0.3
1,664,782	+		AO353_07560	0.11	-0.2
1,664,782	+		AO353_07560	0.11	-1.2
1,664,782	+		AO353_07560	0.11	-1.4
1,664,782	+		AO353_07560	0.11	+0.1
1,664,783	-		AO353_07560	0.11	-1.5
1,664,783	-		AO353_07560	0.11	+0.7
1,664,783	-		AO353_07560	0.11	-0.1
1,664,783	-		AO353_07560	0.11	-0.2
1,664,783	-		AO353_07560	0.11	+0.6
1,664,783	-		AO353_07560	0.11	+1.3
1,664,783	-		AO353_07560	0.11	-0.5
1,664,783	-		AO353_07560	0.11	+0.8
1,664,783	-		AO353_07560	0.11	+1.6
1,664,783	-		AO353_07560	0.11	-1.5
1,664,783	-		AO353_07560	0.11	+1.5
1,664,783	-		AO353_07560	0.11	+0.4
1,664,783	-		AO353_07560	0.11	+0.9
1,664,783	-		AO353_07560	0.11	+0.2
1,664,783	-		AO353_07560	0.11	-0.1
1,664,783	-		AO353_07560	0.11	-1.4
1,664,783	-		AO353_07560	0.11	+0.2
1,664,783	-		AO353_07560	0.11	-0.1
1,664,952	+		AO353_07560	0.19	-1.8
1,664,954	+		AO353_07560	0.19	+0.3
1,664,954	+		AO353_07560	0.19	-1.8
1,664,954	+		AO353_07560	0.19	-1.2
1,664,954	+		AO353_07560	0.19	+0.8
1,664,955	-		AO353_07560	0.19	+0.5
1,664,955	-		AO353_07560	0.19	+0.7
1,664,955	-		AO353_07560	0.19	+0.6
1,664,955	-		AO353_07560	0.19	+0.5
1,664,955	-		AO353_07560	0.19	+1.2
1,664,955	-		AO353_07560	0.19	+0.1
1,664,955	-		AO353_07560	0.19	-0.2
1,664,955	-		AO353_07560	0.19	-0.1
1,664,955	-		AO353_07560	0.19	-1.3
1,664,955	-		AO353_07560	0.19	+0.8
1,664,966	+		AO353_07560	0.20	-0.3
1,664,967	-		AO353_07560	0.20	-0.1
1,664,967	-		AO353_07560	0.20	-1.1
1,664,967	-		AO353_07560	0.20	+0.3
1,664,967	-		AO353_07560	0.20	+0.1
1,665,017	+		AO353_07560	0.22	-0.2
1,665,017	+		AO353_07560	0.22	-0.3
1,665,017	+		AO353_07560	0.22	+1.9
1,665,018	-		AO353_07560	0.22	+0.2
1,665,018	-		AO353_07560	0.22	-0.4
1,665,018	-		AO353_07560	0.22	-1.2
1,665,018	-		AO353_07560	0.22	-0.7
1,665,027	+		AO353_07560	0.22	-2.4
1,665,028	-		AO353_07560	0.22	+1.6
1,665,028	-		AO353_07560	0.22	+1.0
1,665,117	-		AO353_07560	0.26	-1.0
1,665,142	-		AO353_07560	0.28	+0.5
1,665,142	-		AO353_07560	0.28	-0.4
1,665,404	+		AO353_07560	0.40	-1.7
1,665,405	-		AO353_07560	0.40	-1.1
1,665,405	-		AO353_07560	0.40	-2.0
1,665,472	+		AO353_07560	0.43	+0.2
1,665,500	+		AO353_07560	0.44	-0.1
1,665,500	+		AO353_07560	0.44	-1.4
1,665,500	+		AO353_07560	0.44	-0.2
1,665,500	+		AO353_07560	0.44	-0.2
1,665,500	+		AO353_07560	0.44	+0.1
1,665,500	+		AO353_07560	0.44	+0.1
1,665,501	-		AO353_07560	0.44	+0.9
1,665,501	-		AO353_07560	0.44	-0.7
1,665,501	-		AO353_07560	0.44	+0.1
1,665,501	-		AO353_07560	0.44	+0.4
1,665,501	-		AO353_07560	0.44	+0.1
1,665,501	-		AO353_07560	0.44	+0.8
1,665,626	-		AO353_07560	0.50	-0.5
1,665,713	+		AO353_07560	0.54	-1.1
1,665,713	+		AO353_07560	0.54	-0.3
1,665,714	-		AO353_07560	0.54	-0.1
1,665,714	-		AO353_07560	0.54	-1.1
1,665,714	-		AO353_07560	0.54	-0.7
1,665,714	-		AO353_07560	0.54	+0.9
1,665,808	+		AO353_07560	0.58	+0.6
1,665,844	+		AO353_07560	0.60	-1.6
1,665,845	-		AO353_07560	0.60	-0.1
1,665,845	-		AO353_07560	0.60	+0.3
1,665,868	+		AO353_07560	0.61	-2.2
1,665,869	-		AO353_07560	0.61	-2.1
1,665,869	-		AO353_07560	0.61	-1.5
1,665,869	-		AO353_07560	0.61	-0.7
1,665,869	-		AO353_07560	0.61	-1.5
1,666,197	-		AO353_07560	0.76	-0.1
1,666,355	+		AO353_07560	0.83	-1.7
1,666,355	+		AO353_07560	0.83	-1.0
1,666,355	+		AO353_07560	0.83	-0.3
1,666,355	+		AO353_07560	0.83	-0.7
1,666,356	-		AO353_07560	0.83	+0.2
1,666,356	-		AO353_07560	0.83	+0.9
1,666,447	+		AO353_07560	0.88	+0.3
1,666,447	+		AO353_07560	0.88	-1.1
1,666,568	+				-0.2
1,666,568	+				+1.7
1,666,568	+				-0.2
1,666,568	+				-1.9
1,666,569	-				-0.1
1,666,659	-				-0.2
1,666,659	-				-0.2
1,666,803	+				+0.5
1,666,803	+				-1.0
1,666,803	+				-0.8
1,666,803	+				-0.9
1,666,803	+				-0.4
1,666,803	+				+1.2
1,666,803	+				-0.1
1,666,803	+				+0.6
1,666,803	+				+0.9
1,666,803	+				+1.3
1,666,803	+				-1.4
1,666,803	+				-0.8
1,666,803	+				-0.7
1,666,803	+				-0.2
1,666,803	+				-0.5
1,666,803	+				-0.3
1,666,803	+				-0.3
1,666,803	+				+0.0
1,666,803	+				+1.9
1,666,803	+				-0.1
1,666,803	+				-0.3
1,666,803	+				-0.4
1,666,803	+				+0.3
1,666,803	+				-0.7
1,666,803	+				-2.2
1,666,804	-				-0.2
1,666,804	-				+0.7
1,666,804	-				-2.0
1,666,804	-				+0.9
1,666,804	-				-1.0
1,666,804	-				-0.1
1,666,804	-				+0.2
1,666,804	-				-1.1
1,666,804	-				+1.3
1,666,804	-				+0.7
1,666,804	-				+0.4
1,666,804	-				+1.2
1,666,804	-				+0.3
1,666,804	-				+0.3
1,666,804	-				-0.4
1,666,804	-				-1.4
1,666,804	-				+0.2
1,666,804	-				-0.6
1,666,804	-				+0.7
1,666,804	-				-1.0
1,666,804	-				-0.1
1,666,804	-				-0.4
1,666,804	-				+0.5
1,666,804	-				-2.0
1,666,804	-				+0.6
1,666,804	-				+0.3
1,666,804	-				-0.7
1,666,804	-				+0.7
1,667,231	+				+0.1
1,667,232	-				-0.5
1,667,232	-				-1.0
1,667,232	-				-2.0
1,667,246	+				+0.9
1,667,246	+				+0.8
1,667,246	+				+0.3
1,667,246	+				+0.3
1,667,247	-				+0.3
1,667,247	-				-0.7
1,667,247	-				-0.1
1,667,247	-				+0.4
1,667,247	-				+0.2
1,667,247	-				+0.4
1,667,256	+				+0.5
1,667,256	+				+1.9
1,667,256	+				+0.8
1,667,256	+				+0.1
1,667,256	+				-0.7
1,667,256	+				+0.8
1,667,256	+				-0.1
1,667,256	+				+0.1
1,667,256	+				-0.4
1,667,257	-				-0.5
1,667,257	-				-0.2
1,667,257	-				-0.7
1,667,257	-				-0.5
1,667,257	-				-2.0
1,667,257	-				-0.5
1,667,257	-				-0.7
1,667,260	+				+0.7
1,667,260	+				-0.3
1,667,260	+				-1.0
1,667,260	+				+0.3
1,667,260	+				+1.7
1,667,260	+				+0.1
1,667,260	+				+0.3
1,667,260	+				-0.4
1,667,261	-				+0.0
1,667,261	-				+0.9
1,667,261	-				-1.5
1,667,261	-				-0.7
1,667,261	-				-1.1
1,667,261	-				+0.3
1,667,261	-				+0.6
1,667,261	-				+0.1
1,667,261	-				+0.4
1,667,261	-				-0.3
1,667,261	-				+0.6
1,667,261	-				+0.9
1,667,261	-				-0.9
1,667,261	-				+0.0
1,667,261	-				-0.4
1,667,261	-				-0.7
1,667,261	-				-0.6
1,667,310	+				+0.5
1,667,311	-				-0.1
1,667,311	-				-0.5
1,667,311	-				-0.1
1,667,311	-				-1.2
1,667,311	-				-0.1
1,667,331	-				+0.3
1,667,331	-				-0.9
1,667,367	+				-0.3
1,667,367	+				+0.1
1,667,367	+				+0.1
1,667,367	+				-0.5
1,667,367	+				+0.5
1,667,367	+				-2.4
1,667,367	+				+0.9
1,667,367	+				+1.0
1,667,368	-				-0.7
1,667,368	-				-0.3
1,667,370	+				-1.0
1,667,370	+				-0.9
1,667,370	+				-1.3
1,667,370	+				-0.5
1,667,370	+				+0.5
1,667,370	+				-0.5
1,667,371	-				-0.6
1,667,371	-				-0.0
1,667,371	-				-1.0
1,667,376	-				+0.3
1,667,376	-				-0.4
1,667,380	+				-1.7
1,667,380	+				+0.9
1,667,381	-				-0.3
1,667,381	-				-0.7
1,667,381	-				-0.7
1,667,381	-				-1.2
1,667,381	-				+0.6
1,667,381	-				-0.2
1,667,381	-				-0.3
1,667,381	-				-0.2
1,667,381	-				-0.7
1,667,413	+				-0.5
1,667,414	-				-1.1
1,667,414	-				-1.1
1,667,414	-				-0.4
1,667,414	-				+0.9
1,667,414	-				-0.6
1,667,419	+				+0.7
1,667,419	+				+0.8
1,667,419	+				-0.5
1,667,419	+				-1.8
1,667,419	+				+0.1
1,667,419	+				+0.2
1,667,419	+				-0.5
1,667,419	+				-1.8
1,667,419	+				-1.8
1,667,420	-				+0.3
1,667,420	-				+0.1
1,667,420	-				-1.8
1,667,420	-				+0.2
1,667,420	-				-2.9
1,667,420	-				-0.2
1,667,420	-				+0.8
1,667,420	-				-0.1
1,667,420	-				-1.2
1,667,420	-				-0.2
1,667,420	-				-0.9
1,667,420	-				+0.3
1,667,497	+				-0.8
1,667,504	+				-0.1
1,667,504	+				+0.2
1,667,505	-				-0.7
1,667,510	+				-0.1
1,667,510	+				+0.1
1,667,510	+				-1.3
1,667,511	-				+0.2
1,667,511	-				-0.5
1,667,628	+				+0.3
1,667,629	-				-0.1
1,667,629	-				+0.2
1,667,629	-				-0.5
1,667,629	-				+0.9
1,667,658	+				+1.1
1,667,658	+				-0.4
1,667,658	+				+1.1
1,667,712	+		AO353_07570	0.11	-0.7
1,667,712	+		AO353_07570	0.11	+1.3
1,667,712	+		AO353_07570	0.11	+0.4
1,667,712	+		AO353_07570	0.11	+1.1
1,667,713	-		AO353_07570	0.11	+0.7
1,667,713	-		AO353_07570	0.11	-0.1
1,667,713	-		AO353_07570	0.11	-1.5
1,667,713	-		AO353_07570	0.11	-1.9
1,667,713	-		AO353_07570	0.11	-0.3
1,667,713	-		AO353_07570	0.11	-1.7