Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06410 and AO353_06415 are separated by 89 nucleotides AO353_06415 and AO353_06420 are separated by 39 nucleotides
AO353_06410: AO353_06410 - leucine--tRNA ligase, at 1,428,473 to 1,431,079
_06410
AO353_06415: AO353_06415 - hypothetical protein, at 1,431,169 to 1,431,774
_06415
AO353_06420: AO353_06420 - DNA polymerase III subunit delta, at 1,431,814 to 1,432,851
_06420
Position (kb)
1431
1432 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.101 kb on + strand at 1431.352 kb on + strand, within AO353_06415 at 1431.352 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.377 kb on + strand, within AO353_06415 at 1431.442 kb on + strand, within AO353_06415 at 1431.442 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.639 kb on + strand, within AO353_06415 at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.813 kb on + strand at 1431.871 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0008 mg/ml remove 1,431,077 + +0.6 1,431,077 + -1.0 1,431,077 + +1.5 1,431,077 + -0.5 1,431,077 + -1.1 1,431,077 + +0.4 1,431,077 + +0.6 1,431,101 + +1.3 1,431,352 + AO353_06415 0.30 -1.6 1,431,352 + AO353_06415 0.30 -1.6 1,431,367 + AO353_06415 0.33 -0.9 1,431,367 + AO353_06415 0.33 -0.1 1,431,367 + AO353_06415 0.33 -0.1 1,431,367 + AO353_06415 0.33 -0.6 1,431,367 + AO353_06415 0.33 -0.7 1,431,367 + AO353_06415 0.33 -1.7 1,431,367 + AO353_06415 0.33 -2.5 1,431,377 + AO353_06415 0.34 -0.7 1,431,442 + AO353_06415 0.45 -0.5 1,431,442 + AO353_06415 0.45 -0.6 1,431,466 + AO353_06415 0.49 -1.8 1,431,466 + AO353_06415 0.49 -0.1 1,431,466 + AO353_06415 0.49 -1.5 1,431,639 + AO353_06415 0.78 -1.0 1,431,753 + +0.5 1,431,753 + +1.0 1,431,753 + +0.9 1,431,753 + +0.7 1,431,753 + +0.1 1,431,753 + +0.7 1,431,753 + -0.4 1,431,753 + +0.3 1,431,753 + +0.9 1,431,753 + +0.4 1,431,753 + -1.1 1,431,753 + +0.3 1,431,753 + -0.9 1,431,753 + -0.5 1,431,753 + -1.1 1,431,761 + +2.3 1,431,761 + -0.0 1,431,761 + -1.5 1,431,761 + +1.1 1,431,813 + -1.5 1,431,871 + +0.1
Or see this region's nucleotide sequence