Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05325

Experiment: Tetracycline 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0008 mg/ml
1,170,700	-				-1.2
1,170,700	-				+0.2
1,170,700	-				+0.4
1,170,889	+				-2.3
1,170,889	+				-0.1
1,170,889	+				-0.2
1,170,889	+				+0.6
1,170,889	+				-0.7
1,170,890	-				-0.9
1,170,890	-				-1.9
1,170,890	-				+0.4
1,170,890	-				-0.1
1,170,890	-				+1.2
1,170,891	+				+0.5
1,170,891	+				-1.0
1,170,891	+				+0.9
1,170,891	+				-0.9
1,170,891	+				-1.8
1,170,892	-				-0.1
1,170,948	+				+0.8
1,170,949	-				+0.3
1,170,949	-				+1.0
1,170,949	-				+0.2
1,170,949	-				+0.7
1,170,964	+				+1.2
1,170,964	+				+1.2
1,170,964	+				+0.9
1,170,964	+				-1.2
1,170,964	+				+0.2
1,170,965	-				+0.1
1,170,965	-				-0.8
1,170,965	-				-1.2
1,170,965	-				+0.6
1,170,980	-				-0.0
1,171,098	+				-1.8
1,171,098	+				-1.0
1,171,136	+				+1.2
1,171,136	+				+0.8
1,171,136	+				-1.7
1,171,136	+				+0.2
1,171,136	+				+1.0
1,171,137	-				-0.8
1,171,137	-				+0.8
1,171,140	+				+3.1
1,171,140	+				+0.4
1,171,140	+				-0.4
1,171,140	+				-0.2
1,171,140	+				+0.5
1,171,140	+				-0.5
1,171,141	-				-1.2
1,171,141	-				+0.8
1,171,141	-				-1.0
1,171,141	-				+0.5
1,171,141	-				+0.6
1,171,141	-				-0.5
1,171,141	-				+0.2
1,171,141	-				+0.8
1,171,141	-				+0.1
1,171,141	-				-0.2
1,171,141	-				+1.3
1,171,141	-				+0.8
1,171,194	-				-0.6
1,171,216	+				+1.7
1,171,217	-				-0.6
1,171,295	+		AO353_05320	0.18	+0.8
1,171,296	-		AO353_05320	0.18	-1.0
1,171,296	-		AO353_05320	0.18	-1.1
1,171,296	-		AO353_05320	0.18	-0.7
1,171,296	-		AO353_05320	0.18	-2.1
1,171,308	+		AO353_05320	0.22	-1.2
1,171,308	+		AO353_05320	0.22	+0.5
1,171,308	+		AO353_05320	0.22	+0.8
1,171,308	+		AO353_05320	0.22	+0.5
1,171,308	+		AO353_05320	0.22	-0.1
1,171,309	-		AO353_05320	0.22	-0.2
1,171,309	-		AO353_05320	0.22	-1.1
1,171,309	-		AO353_05320	0.22	-0.3
1,171,309	-		AO353_05320	0.22	-1.4
1,171,309	-		AO353_05320	0.22	+0.6
1,171,357	-		AO353_05320	0.36	+0.5
1,171,357	-		AO353_05320	0.36	+0.8
1,171,365	+		AO353_05320	0.38	+0.9
1,171,365	+		AO353_05320	0.38	+0.6
1,171,366	-		AO353_05320	0.38	+0.4
1,171,366	-		AO353_05320	0.38	-1.0
1,171,376	-		AO353_05320	0.41	+0.5
1,171,408	+		AO353_05320	0.50	+1.0
1,171,408	+		AO353_05320	0.50	-0.0
1,171,408	+		AO353_05320	0.50	-1.7
1,171,409	-		AO353_05320	0.50	-0.7
1,171,409	-		AO353_05320	0.50	+1.3
1,171,409	-		AO353_05320	0.50	+1.0
1,171,425	+		AO353_05320	0.55	-0.4
1,171,425	+		AO353_05320	0.55	+0.1
1,171,425	+		AO353_05320	0.55	-2.2
1,171,425	+		AO353_05320	0.55	-0.7
1,171,426	-		AO353_05320	0.55	+1.3
1,171,426	-		AO353_05320	0.55	-0.4
1,171,426	-		AO353_05320	0.55	+0.1
1,171,426	-		AO353_05320	0.55	+1.0
1,171,506	+		AO353_05320	0.78	-0.5
1,171,506	+		AO353_05320	0.78	-0.4
1,171,506	+		AO353_05320	0.78	+0.6
1,171,506	+		AO353_05320	0.78	+0.6
1,171,506	+		AO353_05320	0.78	-0.2
1,171,506	+		AO353_05320	0.78	-0.2
1,171,507	-		AO353_05320	0.78	+0.5
1,171,507	-		AO353_05320	0.78	-0.7
1,171,507	-		AO353_05320	0.78	-0.6
1,171,507	-		AO353_05320	0.78	-0.1
1,171,507	-		AO353_05320	0.78	+1.0
1,171,507	-		AO353_05320	0.78	-0.6
1,171,507	-		AO353_05320	0.78	-0.3
1,171,514	+		AO353_05320	0.80	+1.4
1,171,514	+		AO353_05320	0.80	-0.1
1,171,514	+		AO353_05320	0.80	-0.6
1,171,514	+		AO353_05320	0.80	+0.1
1,171,514	+		AO353_05320	0.80	-0.9
1,171,514	+		AO353_05320	0.80	-0.5
1,171,515	-		AO353_05320	0.81	+0.5
1,171,515	-		AO353_05320	0.81	-1.5
1,171,548	+				-2.2
1,171,548	+				-0.4
1,171,548	+				-1.4
1,171,548	+				-1.5
1,171,549	-				-1.0
1,171,549	-				+0.2
1,171,549	-				+1.0
1,171,549	-				+0.6
1,171,580	+				+0.0
1,171,745	+		AO353_05325	0.20	-0.4
1,171,745	+		AO353_05325	0.20	-0.5
1,171,745	+		AO353_05325	0.20	-1.5
1,171,745	+		AO353_05325	0.20	-1.1
1,171,745	+		AO353_05325	0.20	-0.7
1,171,745	+		AO353_05325	0.20	-1.5
1,171,745	+		AO353_05325	0.20	+0.2
1,171,745	+		AO353_05325	0.20	+1.4
1,171,745	+		AO353_05325	0.20	-1.3
1,171,745	+		AO353_05325	0.20	-0.5
1,171,745	+		AO353_05325	0.20	-1.2
1,171,745	+		AO353_05325	0.20	-0.1
1,171,746	-		AO353_05325	0.20	+0.5
1,171,746	-		AO353_05325	0.20	-0.8
1,171,746	-		AO353_05325	0.20	+0.6
1,171,746	-		AO353_05325	0.20	-1.8
1,171,746	-		AO353_05325	0.20	-1.3
1,171,746	-		AO353_05325	0.20	-0.4
1,171,746	-		AO353_05325	0.20	+0.2
1,171,746	-		AO353_05325	0.20	-0.2
1,171,746	-		AO353_05325	0.20	-1.5
1,171,791	+		AO353_05325	0.26	+1.5
1,172,381	+				-1.8
1,172,381	+				-1.0
1,172,381	+				+0.2
1,172,381	+				-0.4
1,172,382	-				+0.2
1,172,448	+				+1.0
1,172,449	-				+0.2
1,172,580	+				+0.2
1,172,581	-				-1.7
1,172,581	-				-0.0
1,172,581	-				-0.2
1,172,581	-				+0.5
1,172,581	-				+0.2
1,172,581	-				+0.5
1,172,581	-				+0.8
1,172,631	+		AO353_05330	0.11	-1.0
1,172,631	+		AO353_05330	0.11	-0.5
1,172,631	+		AO353_05330	0.11	-1.7
1,172,631	+		AO353_05330	0.11	+0.4
1,172,631	+		AO353_05330	0.11	-1.0
1,172,631	+		AO353_05330	0.11	-3.3
1,172,632	-		AO353_05330	0.11	-0.4
1,172,632	-		AO353_05330	0.11	+0.3
1,172,632	-		AO353_05330	0.11	-0.2
1,172,632	-		AO353_05330	0.11	+0.3
1,172,632	-		AO353_05330	0.11	-0.1
1,172,632	-		AO353_05330	0.11	-0.2
1,172,632	-		AO353_05330	0.11	-1.1
1,172,632	-		AO353_05330	0.11	+2.2
1,172,632	-		AO353_05330	0.11	+1.5
1,172,649	+		AO353_05330	0.12	-0.0
1,172,775	+		AO353_05330	0.19	+0.5
1,172,790	+		AO353_05330	0.20	-0.6
1,172,790	+		AO353_05330	0.20	+0.8
1,172,790	+		AO353_05330	0.20	-1.0
1,172,790	+		AO353_05330	0.20	+1.5
1,172,790	+		AO353_05330	0.20	-1.4
1,172,790	+		AO353_05330	0.20	-0.9
1,172,790	+		AO353_05330	0.20	+1.4
1,172,790	+		AO353_05330	0.20	-0.3
1,172,790	+		AO353_05330	0.20	-0.7
1,172,791	-		AO353_05330	0.20	+1.0
1,172,791	-		AO353_05330	0.20	-0.4
1,172,791	-		AO353_05330	0.20	-0.8
1,172,791	-		AO353_05330	0.20	-0.2
1,172,791	-		AO353_05330	0.20	-0.5
1,172,791	-		AO353_05330	0.20	+1.6
1,172,791	-		AO353_05330	0.20	+0.6
1,172,791	-		AO353_05330	0.20	-0.5
1,172,791	-		AO353_05330	0.20	-2.0
1,172,812	-		AO353_05330	0.21	-0.4
1,172,993	+		AO353_05330	0.32	-1.0
1,173,010	+		AO353_05330	0.33	+0.3
1,173,181	-		AO353_05330	0.42	-0.7
1,173,273	+		AO353_05330	0.48	+0.8
1,173,274	-		AO353_05330	0.48	-0.5
1,173,304	+		AO353_05330	0.50	-1.8
1,173,304	+		AO353_05330	0.50	-0.7
1,173,305	-		AO353_05330	0.50	-0.0
1,173,305	-		AO353_05330	0.50	-0.3
1,173,305	-		AO353_05330	0.50	-1.0
1,173,305	-		AO353_05330	0.50	-0.4
1,173,305	-		AO353_05330	0.50	+0.2
1,173,305	-		AO353_05330	0.50	-1.1
1,173,331	+		AO353_05330	0.51	+0.8
1,173,331	+		AO353_05330	0.51	+0.7
1,173,331	+		AO353_05330	0.51	+1.0
1,173,332	-		AO353_05330	0.51	+1.4
1,173,332	-		AO353_05330	0.51	+0.7