Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03600 and AO353_03605 are separated by 108 nucleotides AO353_03605 and AO353_03610 are separated by 167 nucleotides
AO353_03600: AO353_03600 - aspartate--tRNA(Asp/Asn) ligase, at 768,265 to 770,040
_03600
AO353_03605: AO353_03605 - FmdB family transcriptional regulator, at 770,149 to 770,370
_03605
AO353_03610: AO353_03610 - arylsulfate sulfotransferase, at 770,538 to 770,873
_03610
Position (kb) 770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 770.062 kb on - strand at 770.108 kb on - strand at 770.108 kb on - strand at 770.151 kb on - strand at 770.151 kb on - strand at 770.211 kb on - strand, within AO353_03605 at 770.355 kb on - strand at 770.355 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.361 kb on - strand at 770.394 kb on - strand at 770.394 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.436 kb on - strand at 770.438 kb on - strand at 770.445 kb on - strand at 770.550 kb on - strand at 770.550 kb on - strand at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.574 kb on + strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.575 kb on - strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.642 kb on + strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.643 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.651 kb on - strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.713 kb on + strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.714 kb on - strand, within AO353_03610 at 770.885 kb on + strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.886 kb on - strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.907 kb on + strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.908 kb on - strand at 770.944 kb on + strand at 770.944 kb on + strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.945 kb on - strand at 770.960 kb on + strand at 770.960 kb on + strand at 770.961 kb on - strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.964 kb on + strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.965 kb on - strand at 770.966 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.980 kb on + strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.981 kb on - strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.994 kb on + strand at 770.995 kb on - strand at 770.995 kb on - strand at 770.995 kb on - strand at 771.025 kb on + strand at 771.026 kb on - strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.036 kb on + strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.037 kb on - strand at 771.046 kb on + strand at 771.047 kb on - strand at 771.049 kb on - strand at 771.049 kb on - strand at 771.093 kb on + strand at 771.094 kb on - strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.207 kb on + strand at 771.208 kb on - strand at 771.208 kb on - strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.209 kb on + strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.210 kb on - strand at 771.288 kb on - strand at 771.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0008 mg/ml remove 770,062 - +0.6 770,108 - +0.5 770,108 - +0.2 770,151 - +0.3 770,151 - -1.6 770,211 - AO353_03605 0.28 -0.1 770,355 - -0.4 770,355 - +0.6 770,361 - +1.0 770,361 - -0.1 770,361 - -0.7 770,361 - +0.6 770,361 - +0.1 770,361 - +1.1 770,361 - -1.2 770,361 - -0.9 770,361 - +1.1 770,361 - -0.7 770,361 - -1.2 770,394 - +0.2 770,394 - -0.7 770,436 - +0.1 770,436 - -0.4 770,436 - -0.8 770,436 - +1.4 770,436 - -0.2 770,436 - -1.5 770,436 - -0.9 770,436 - -2.2 770,438 - +0.7 770,445 - -0.7 770,550 - +0.4 770,550 - +0.2 770,574 + AO353_03610 0.11 -0.9 770,574 + AO353_03610 0.11 +0.2 770,574 + AO353_03610 0.11 +0.4 770,574 + AO353_03610 0.11 +0.4 770,575 - AO353_03610 0.11 -0.0 770,575 - AO353_03610 0.11 -0.2 770,642 + AO353_03610 0.31 -2.2 770,642 + AO353_03610 0.31 +0.4 770,642 + AO353_03610 0.31 +1.4 770,643 - AO353_03610 0.31 +0.2 770,643 - AO353_03610 0.31 +0.8 770,651 - AO353_03610 0.34 -0.9 770,651 - AO353_03610 0.34 -0.5 770,651 - AO353_03610 0.34 +0.3 770,651 - AO353_03610 0.34 -0.2 770,713 + AO353_03610 0.52 +0.7 770,713 + AO353_03610 0.52 -1.7 770,713 + AO353_03610 0.52 -1.7 770,714 - AO353_03610 0.52 -1.2 770,714 - AO353_03610 0.52 -0.1 770,714 - AO353_03610 0.52 -0.4 770,885 + +0.2 770,886 - -0.7 770,886 - +0.2 770,886 - +0.7 770,886 - -0.1 770,886 - +0.0 770,886 - +0.8 770,907 + -0.4 770,907 + -0.6 770,907 + -1.4 770,908 - -1.5 770,908 - +2.6 770,908 - -1.2 770,908 - +0.3 770,908 - +0.3 770,908 - +0.5 770,908 - +0.6 770,944 + +0.3 770,944 + +0.1 770,945 - +0.2 770,945 - -0.8 770,945 - +0.8 770,945 - -0.5 770,945 - +0.7 770,945 - -0.3 770,945 - -0.7 770,960 + -0.1 770,960 + +0.3 770,961 - -0.3 770,964 + -0.4 770,964 + -1.2 770,964 + -0.6 770,964 + -0.2 770,964 + +0.1 770,964 + -1.2 770,964 + +1.0 770,964 + -0.7 770,964 + -0.4 770,965 - +0.1 770,965 - -0.9 770,965 - -0.1 770,965 - -0.2 770,965 - -1.0 770,965 - +0.3 770,965 - -0.5 770,965 - -0.4 770,965 - -1.4 770,966 + -0.8 770,980 + +0.2 770,980 + -2.2 770,980 + +1.2 770,980 + +0.3 770,980 + -0.7 770,980 + -1.9 770,981 - -0.2 770,981 - +1.2 770,981 - -0.9 770,981 - -0.1 770,981 - -1.1 770,981 - -0.9 770,994 + +0.9 770,994 + -0.1 770,994 + -0.1 770,994 + -0.4 770,995 - +1.3 770,995 - -1.1 770,995 - +0.6 771,025 + +1.6 771,026 - -1.4 771,036 + -1.9 771,036 + +0.1 771,036 + -0.6 771,036 + -0.5 771,036 + +1.8 771,036 + -1.2 771,036 + -0.8 771,037 - -2.4 771,037 - +0.2 771,037 - +0.4 771,037 - -2.7 771,037 - -0.5 771,037 - +0.2 771,037 - -1.4 771,037 - +1.0 771,037 - -0.5 771,037 - +2.2 771,037 - +1.1 771,037 - -0.4 771,037 - -0.2 771,046 + -0.5 771,047 - -1.4 771,049 - +0.5 771,049 - -1.9 771,093 + -0.1 771,094 - -1.7 771,207 + -1.9 771,207 + +1.3 771,207 + +0.3 771,208 - -3.2 771,208 - -1.2 771,209 + +0.8 771,209 + +0.1 771,209 + +0.5 771,209 + +0.7 771,209 + +0.4 771,209 + +0.4 771,210 - +0.4 771,210 - +0.6 771,210 - -0.4 771,288 - +0.8 771,288 - -2.3
Or see this region's nucleotide sequence