Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03350 and AO353_03355 are separated by 17 nucleotides AO353_03355 and AO353_03360 overlap by 14 nucleotides AO353_03360 and AO353_03365 are separated by 197 nucleotides
AO353_03350: AO353_03350 - keto-deoxy-phosphogluconate aldolase, at 713,020 to 713,685
_03350
AO353_03355: AO353_03355 - 6-phosphogluconolactonase, at 713,703 to 714,416
_03355
AO353_03360: AO353_03360 - glucose-6-phosphate dehydrogenase, at 714,403 to 715,872
_03360
AO353_03365: AO353_03365 - transcriptional regulator, at 716,070 to 716,939
_03365
Position (kb)
714
715
716 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 714.565 kb on - strand, within AO353_03360 at 714.618 kb on - strand, within AO353_03360 at 714.645 kb on - strand, within AO353_03360 at 714.736 kb on - strand, within AO353_03360 at 714.736 kb on - strand, within AO353_03360 at 714.807 kb on - strand, within AO353_03360 at 714.879 kb on - strand, within AO353_03360 at 715.013 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.017 kb on - strand, within AO353_03360 at 715.206 kb on - strand, within AO353_03360 at 715.266 kb on - strand, within AO353_03360 at 715.266 kb on - strand, within AO353_03360 at 715.347 kb on - strand, within AO353_03360 at 715.347 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.362 kb on - strand, within AO353_03360 at 715.383 kb on - strand, within AO353_03360 at 715.506 kb on - strand, within AO353_03360 at 715.530 kb on - strand, within AO353_03360 at 715.530 kb on - strand, within AO353_03360 at 715.530 kb on - strand, within AO353_03360 at 715.578 kb on - strand, within AO353_03360 at 715.578 kb on - strand, within AO353_03360 at 715.611 kb on - strand, within AO353_03360 at 715.611 kb on - strand, within AO353_03360 at 715.611 kb on - strand, within AO353_03360 at 715.671 kb on - strand, within AO353_03360 at 715.671 kb on - strand, within AO353_03360 at 715.671 kb on - strand, within AO353_03360 at 715.693 kb on - strand, within AO353_03360 at 715.693 kb on - strand, within AO353_03360 at 715.693 kb on - strand, within AO353_03360 at 715.693 kb on - strand, within AO353_03360 at 715.785 kb on - strand at 715.785 kb on - strand at 715.785 kb on - strand at 715.968 kb on + strand at 715.969 kb on - strand at 715.969 kb on - strand at 715.970 kb on + strand at 716.004 kb on + strand at 716.009 kb on + strand at 716.010 kb on - strand at 716.050 kb on - strand at 716.058 kb on + strand at 716.058 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.067 kb on + strand at 716.068 kb on - strand at 716.068 kb on - strand at 716.068 kb on - strand at 716.068 kb on - strand at 716.068 kb on - strand at 716.068 kb on - strand at 716.189 kb on + strand, within AO353_03365 at 716.190 kb on - strand, within AO353_03365 at 716.319 kb on + strand, within AO353_03365 at 716.319 kb on + strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.320 kb on - strand, within AO353_03365 at 716.361 kb on + strand, within AO353_03365 at 716.361 kb on + strand, within AO353_03365 at 716.361 kb on + strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.362 kb on - strand, within AO353_03365 at 716.631 kb on + strand, within AO353_03365 at 716.632 kb on - strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.781 kb on + strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365 at 716.782 kb on - strand, within AO353_03365
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0008 mg/ml remove 714,565 - AO353_03360 0.11 -0.7 714,618 - AO353_03360 0.15 -0.4 714,645 - AO353_03360 0.16 +1.6 714,736 - AO353_03360 0.23 -0.5 714,736 - AO353_03360 0.23 -1.7 714,807 - AO353_03360 0.27 -1.2 714,879 - AO353_03360 0.32 -1.4 715,013 - AO353_03360 0.41 -2.9 715,017 - AO353_03360 0.42 -1.9 715,017 - AO353_03360 0.42 -1.4 715,017 - AO353_03360 0.42 -0.7 715,017 - AO353_03360 0.42 -0.4 715,017 - AO353_03360 0.42 -1.6 715,017 - AO353_03360 0.42 -1.4 715,017 - AO353_03360 0.42 -1.9 715,017 - AO353_03360 0.42 +0.2 715,017 - AO353_03360 0.42 -2.8 715,206 - AO353_03360 0.55 -1.0 715,266 - AO353_03360 0.59 -1.6 715,266 - AO353_03360 0.59 -0.7 715,347 - AO353_03360 0.64 +0.0 715,347 - AO353_03360 0.64 -1.7 715,362 - AO353_03360 0.65 +1.2 715,362 - AO353_03360 0.65 +0.0 715,362 - AO353_03360 0.65 +1.0 715,362 - AO353_03360 0.65 +1.5 715,362 - AO353_03360 0.65 -0.7 715,362 - AO353_03360 0.65 -1.0 715,362 - AO353_03360 0.65 -1.2 715,362 - AO353_03360 0.65 -1.3 715,383 - AO353_03360 0.67 -2.1 715,506 - AO353_03360 0.75 -1.2 715,530 - AO353_03360 0.77 -1.4 715,530 - AO353_03360 0.77 -0.4 715,530 - AO353_03360 0.77 +0.2 715,578 - AO353_03360 0.80 -1.6 715,578 - AO353_03360 0.80 -2.7 715,611 - AO353_03360 0.82 -1.4 715,611 - AO353_03360 0.82 -1.7 715,611 - AO353_03360 0.82 -1.2 715,671 - AO353_03360 0.86 -1.2 715,671 - AO353_03360 0.86 -0.7 715,671 - AO353_03360 0.86 -2.6 715,693 - AO353_03360 0.88 -1.0 715,693 - AO353_03360 0.88 +1.6 715,693 - AO353_03360 0.88 -1.0 715,693 - AO353_03360 0.88 -2.9 715,785 - -1.4 715,785 - -3.3 715,785 - +0.1 715,968 + -1.7 715,969 - +0.9 715,969 - -0.1 715,970 + -1.2 716,004 + -0.1 716,009 + -1.1 716,010 - +0.9 716,050 - +0.6 716,058 + -0.7 716,058 + +0.5 716,067 + -0.6 716,067 + -1.0 716,067 + +2.3 716,067 + +0.8 716,067 + +0.1 716,067 + -0.0 716,067 + -0.1 716,067 + -0.9 716,067 + -1.4 716,067 + -1.0 716,067 + -1.5 716,067 + +0.3 716,067 + -0.0 716,067 + -0.2 716,068 - -0.2 716,068 - -0.5 716,068 - -0.2 716,068 - -1.2 716,068 - +0.5 716,068 - -0.4 716,189 + AO353_03365 0.14 -0.7 716,190 - AO353_03365 0.14 +0.9 716,319 + AO353_03365 0.29 -0.3 716,319 + AO353_03365 0.29 +0.8 716,320 - AO353_03365 0.29 -1.4 716,320 - AO353_03365 0.29 -0.6 716,320 - AO353_03365 0.29 +0.5 716,320 - AO353_03365 0.29 -0.2 716,320 - AO353_03365 0.29 -0.9 716,320 - AO353_03365 0.29 +2.0 716,320 - AO353_03365 0.29 -0.6 716,361 + AO353_03365 0.33 -1.2 716,361 + AO353_03365 0.33 -1.8 716,361 + AO353_03365 0.33 -2.2 716,362 - AO353_03365 0.34 +1.2 716,362 - AO353_03365 0.34 -0.4 716,362 - AO353_03365 0.34 +1.3 716,362 - AO353_03365 0.34 -1.6 716,362 - AO353_03365 0.34 -0.7 716,362 - AO353_03365 0.34 -0.7 716,362 - AO353_03365 0.34 -1.2 716,631 + AO353_03365 0.64 +0.6 716,632 - AO353_03365 0.65 -0.4 716,781 + AO353_03365 0.82 -0.2 716,781 + AO353_03365 0.82 +0.2 716,781 + AO353_03365 0.82 +0.1 716,781 + AO353_03365 0.82 -1.1 716,781 + AO353_03365 0.82 -0.5 716,781 + AO353_03365 0.82 -1.9 716,781 + AO353_03365 0.82 +0.2 716,781 + AO353_03365 0.82 -0.9 716,781 + AO353_03365 0.82 -1.9 716,781 + AO353_03365 0.82 +0.3 716,781 + AO353_03365 0.82 +0.5 716,781 + AO353_03365 0.82 +1.0 716,781 + AO353_03365 0.82 +0.3 716,781 + AO353_03365 0.82 +0.5 716,781 + AO353_03365 0.82 -2.0 716,781 + AO353_03365 0.82 +0.4 716,781 + AO353_03365 0.82 -0.5 716,782 - AO353_03365 0.82 +1.1 716,782 - AO353_03365 0.82 -2.3 716,782 - +0.6 716,782 - AO353_03365 0.82 +0.6 716,782 - AO353_03365 0.82 -0.4 716,782 - AO353_03365 0.82 -1.7 716,782 - AO353_03365 0.82 -0.9 716,782 - AO353_03365 0.82 -0.6 716,782 - AO353_03365 0.82 +0.8 716,782 - AO353_03365 0.82 +0.4 716,782 - AO353_03365 0.82 +0.3 716,782 - AO353_03365 0.82 +0.0 716,782 - AO353_03365 0.82 +0.4 716,782 - AO353_03365 0.82 -0.6 716,782 - AO353_03365 0.82 -0.0
Or see this region's nucleotide sequence