Experiment: Tetracycline 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02570 and AO353_02575 are separated by 278 nucleotides AO353_02575 and AO353_02580 are separated by 145 nucleotides
AO353_02570: AO353_02570 - hypothetical protein, at 550,091 to 550,315
_02570
AO353_02575: AO353_02575 - hypothetical protein, at 550,594 to 551,076
_02575
AO353_02580: AO353_02580 - Long-chain fatty acid transport protein, at 551,222 to 552,493
_02580
Position (kb) 550
551 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 549.109 kb on + strand at 549.109 kb on + strand at 549.109 kb on + strand at 549.110 kb on - strand at 549.129 kb on + strand at 549.159 kb on + strand at 549.319 kb on + strand at 549.376 kb on + strand at 549.376 kb on + strand at 549.377 kb on - strand at 549.377 kb on - strand at 549.377 kb on - strand at 549.377 kb on - strand at 549.377 kb on - strand at 549.404 kb on + strand at 549.404 kb on + strand at 549.404 kb on + strand at 549.404 kb on + strand at 549.405 kb on - strand at 549.405 kb on - strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.406 kb on + strand at 549.407 kb on - strand at 549.407 kb on - strand at 549.407 kb on - strand at 549.407 kb on - strand at 549.407 kb on - strand at 549.463 kb on + strand at 549.463 kb on + strand at 549.464 kb on - strand at 549.464 kb on - strand at 549.464 kb on - strand at 549.528 kb on + strand at 549.529 kb on - strand at 549.529 kb on - strand at 549.529 kb on - strand at 549.529 kb on - strand at 549.605 kb on + strand at 549.605 kb on + strand at 549.605 kb on + strand at 549.605 kb on + strand at 549.605 kb on + strand at 549.605 kb on + strand at 549.606 kb on - strand at 549.606 kb on - strand at 549.606 kb on - strand at 549.616 kb on - strand at 549.676 kb on + strand at 549.676 kb on + strand at 549.679 kb on + strand at 549.679 kb on + strand at 549.680 kb on - strand at 549.680 kb on - strand at 549.720 kb on + strand at 549.720 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.722 kb on + strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.723 kb on - strand at 549.785 kb on + strand at 549.785 kb on + strand at 549.786 kb on - strand at 549.786 kb on - strand at 549.843 kb on + strand at 549.843 kb on + strand at 549.843 kb on + strand at 549.843 kb on + strand at 549.844 kb on - strand at 549.844 kb on - strand at 549.844 kb on - strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.928 kb on + strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.929 kb on - strand at 549.932 kb on + strand at 549.932 kb on + strand at 549.932 kb on + strand at 549.932 kb on + strand at 549.932 kb on + strand at 549.932 kb on + strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.933 kb on - strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.936 kb on + strand at 549.937 kb on - strand at 549.937 kb on - strand at 549.937 kb on - strand at 549.937 kb on - strand at 549.937 kb on - strand at 549.937 kb on - strand at 549.966 kb on - strand at 550.041 kb on + strand at 550.041 kb on + strand at 550.041 kb on + strand at 550.042 kb on - strand at 550.059 kb on - strand at 550.073 kb on + strand at 550.073 kb on + strand at 550.073 kb on + strand at 550.073 kb on + strand at 550.073 kb on + strand at 550.074 kb on - strand at 550.074 kb on - strand at 550.074 kb on - strand at 550.074 kb on - strand at 550.074 kb on - strand at 550.086 kb on + strand at 550.096 kb on + strand at 550.096 kb on + strand at 550.096 kb on + strand at 550.096 kb on + strand at 550.096 kb on + strand at 550.097 kb on - strand at 550.097 kb on - strand at 550.241 kb on + strand, within AO353_02570 at 550.253 kb on + strand, within AO353_02570 at 550.253 kb on + strand, within AO353_02570 at 550.253 kb on + strand, within AO353_02570 at 550.253 kb on + strand, within AO353_02570 at 550.254 kb on - strand, within AO353_02570 at 550.352 kb on + strand at 550.352 kb on + strand at 550.353 kb on - strand at 550.370 kb on - strand at 550.379 kb on + strand at 550.380 kb on - strand at 550.380 kb on - strand at 550.404 kb on + strand at 550.405 kb on - strand at 550.408 kb on + strand at 550.408 kb on + strand at 550.409 kb on - strand at 550.421 kb on - strand at 550.421 kb on - strand at 550.429 kb on + strand at 550.430 kb on - strand at 550.484 kb on + strand at 550.485 kb on - strand at 550.485 kb on - strand at 550.594 kb on - strand at 550.594 kb on - strand at 550.648 kb on + strand, within AO353_02575 at 550.754 kb on - strand, within AO353_02575 at 550.795 kb on + strand, within AO353_02575 at 550.796 kb on - strand, within AO353_02575 at 550.796 kb on - strand, within AO353_02575 at 550.796 kb on - strand, within AO353_02575 at 550.897 kb on + strand, within AO353_02575 at 550.898 kb on - strand, within AO353_02575 at 550.919 kb on + strand, within AO353_02575 at 550.920 kb on - strand, within AO353_02575 at 550.922 kb on + strand, within AO353_02575 at 550.922 kb on + strand, within AO353_02575 at 550.922 kb on + strand, within AO353_02575 at 550.922 kb on + strand, within AO353_02575 at 550.923 kb on - strand, within AO353_02575 at 550.923 kb on - strand, within AO353_02575 at 550.925 kb on + strand, within AO353_02575 at 550.925 kb on + strand, within AO353_02575 at 550.925 kb on + strand, within AO353_02575 at 550.925 kb on + strand, within AO353_02575 at 550.925 kb on + strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.926 kb on - strand, within AO353_02575 at 550.938 kb on + strand, within AO353_02575 at 550.938 kb on + strand, within AO353_02575 at 550.939 kb on - strand, within AO353_02575 at 551.049 kb on - strand at 551.049 kb on - strand at 551.074 kb on + strand at 551.101 kb on + strand at 551.101 kb on + strand at 551.101 kb on + strand at 551.102 kb on - strand at 551.103 kb on + strand at 551.103 kb on + strand at 551.103 kb on + strand at 551.103 kb on + strand at 551.104 kb on - strand at 551.104 kb on - strand at 551.104 kb on - strand at 551.104 kb on - strand at 551.104 kb on - strand at 551.142 kb on + strand at 551.142 kb on + strand at 551.154 kb on + strand at 551.154 kb on + strand at 551.154 kb on + strand at 551.154 kb on + strand at 551.155 kb on - strand at 551.155 kb on - strand at 551.155 kb on - strand at 551.161 kb on + strand at 551.162 kb on - strand at 551.162 kb on - strand at 551.164 kb on - strand at 551.186 kb on + strand at 551.217 kb on + strand at 551.217 kb on + strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.218 kb on - strand at 551.221 kb on - strand at 551.221 kb on - strand at 551.221 kb on - strand at 551.233 kb on - strand at 551.233 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0008 mg/ml remove 549,109 + -0.6 549,109 + +0.2 549,109 + -0.8 549,110 - -0.4 549,129 + -0.4 549,159 + -0.2 549,319 + -1.1 549,376 + -1.7 549,376 + -0.4 549,377 - -2.0 549,377 - +0.4 549,377 - +0.1 549,377 - +0.9 549,377 - -1.1 549,404 + +2.0 549,404 + -0.8 549,404 + -0.5 549,404 + -0.3 549,405 - -0.5 549,405 - +0.1 549,406 + +0.1 549,406 + +0.7 549,406 + -0.3 549,406 + -1.6 549,406 + -0.8 549,406 + -0.1 549,406 + +0.6 549,406 + +0.2 549,406 + -0.3 549,407 - +0.2 549,407 - -0.8 549,407 - -0.5 549,407 - +0.0 549,407 - +0.6 549,463 + +0.9 549,463 + -0.1 549,464 - +0.5 549,464 - -0.5 549,464 - -0.9 549,528 + +0.4 549,529 - -0.7 549,529 - +0.9 549,529 - -1.8 549,529 - +0.3 549,605 + -0.9 549,605 + +0.9 549,605 + +0.5 549,605 + +0.8 549,605 + -0.3 549,605 + +0.2 549,606 - -2.3 549,606 - +0.2 549,606 - +1.0 549,616 - -0.1 549,676 + -2.5 549,676 + -0.5 549,679 + -0.8 549,679 + -1.7 549,680 - +0.2 549,680 - +0.9 549,720 + -0.4 549,720 + +1.9 549,722 + +0.5 549,722 + +0.1 549,722 + -2.2 549,722 + +1.3 549,722 + -2.0 549,722 + -0.3 549,722 + +0.7 549,722 + -0.4 549,722 + +0.9 549,723 - +0.2 549,723 - -0.7 549,723 - -1.8 549,723 - +0.2 549,723 - +1.5 549,723 - -0.1 549,723 - -2.2 549,723 - -2.0 549,723 - -1.1 549,723 - -1.3 549,723 - -0.1 549,723 - +0.1 549,785 + -0.6 549,785 + +1.5 549,786 - -1.5 549,786 - -0.8 549,843 + -2.5 549,843 + -1.1 549,843 + -0.1 549,843 + -0.3 549,844 - -0.6 549,844 - -0.2 549,844 - -0.1 549,928 + -0.5 549,928 + -1.8 549,928 + -0.6 549,928 + -0.4 549,928 + -0.7 549,928 + +0.2 549,928 + +0.4 549,928 + +0.5 549,928 + -1.6 549,928 + -1.2 549,928 + -1.0 549,928 + +0.0 549,928 + -1.5 549,928 + -1.0 549,928 + -0.4 549,928 + -1.3 549,928 + +0.2 549,929 - -1.8 549,929 - -1.3 549,929 - -1.0 549,929 - +1.3 549,929 - -1.4 549,929 - -1.0 549,929 - -1.1 549,929 - -1.3 549,929 - +0.8 549,929 - +0.2 549,929 - -0.1 549,932 + -0.8 549,932 + +0.1 549,932 + -0.5 549,932 + -1.4 549,932 + +1.5 549,932 + -0.8 549,933 - -1.1 549,933 - +0.1 549,933 - -1.0 549,933 - +0.5 549,933 - -0.5 549,933 - -0.4 549,933 - -0.6 549,936 + -0.5 549,936 + -1.2 549,936 + -1.5 549,936 + -2.8 549,936 + -0.7 549,936 + +0.8 549,936 + -0.8 549,936 + +0.7 549,937 - +0.0 549,937 - +1.5 549,937 - -1.0 549,937 - -0.1 549,937 - -0.2 549,937 - -1.1 549,966 - -0.2 550,041 + -0.2 550,041 + -0.5 550,041 + +0.4 550,042 - -1.8 550,059 - -0.8 550,073 + -0.9 550,073 + -1.1 550,073 + -0.1 550,073 + -0.3 550,073 + -0.7 550,074 - -0.6 550,074 - +0.5 550,074 - -0.5 550,074 - +0.1 550,074 - -0.1 550,086 + +0.0 550,096 + -1.1 550,096 + -0.6 550,096 + -0.4 550,096 + +1.3 550,096 + -0.0 550,097 - -1.5 550,097 - -1.2 550,241 + AO353_02570 0.67 -2.1 550,253 + AO353_02570 0.72 -1.2 550,253 + AO353_02570 0.72 -1.8 550,253 + AO353_02570 0.72 -2.3 550,253 + AO353_02570 0.72 -1.3 550,254 - AO353_02570 0.72 -1.5 550,352 + +0.2 550,352 + -0.8 550,353 - -1.7 550,370 - -0.2 550,379 + -0.4 550,380 - +1.7 550,380 - +0.2 550,404 + -0.8 550,405 - -0.1 550,408 + -1.2 550,408 + +0.4 550,409 - -0.8 550,421 - +1.5 550,421 - +0.1 550,429 + -1.7 550,430 - +0.0 550,484 + -0.4 550,485 - +0.0 550,485 - +1.1 550,594 - +0.1 550,594 - -0.3 550,648 + AO353_02575 0.11 -1.5 550,754 - AO353_02575 0.33 -1.0 550,795 + AO353_02575 0.42 +0.8 550,796 - AO353_02575 0.42 -0.2 550,796 - AO353_02575 0.42 -0.2 550,796 - AO353_02575 0.42 -2.0 550,897 + AO353_02575 0.63 +0.8 550,898 - AO353_02575 0.63 -0.6 550,919 + AO353_02575 0.67 +0.2 550,920 - AO353_02575 0.67 -0.8 550,922 + AO353_02575 0.68 -0.4 550,922 + AO353_02575 0.68 +0.5 550,922 + AO353_02575 0.68 -1.7 550,922 + AO353_02575 0.68 +2.0 550,923 - AO353_02575 0.68 -0.4 550,923 - AO353_02575 0.68 -0.5 550,925 + AO353_02575 0.69 +0.9 550,925 + AO353_02575 0.69 +0.2 550,925 + AO353_02575 0.69 -0.7 550,925 + AO353_02575 0.69 +0.4 550,925 + AO353_02575 0.69 +0.8 550,926 - AO353_02575 0.69 +0.9 550,926 - AO353_02575 0.69 +1.0 550,926 - AO353_02575 0.69 +0.6 550,926 - AO353_02575 0.69 +0.1 550,926 - AO353_02575 0.69 +0.9 550,926 - AO353_02575 0.69 +0.5 550,926 - AO353_02575 0.69 -0.8 550,926 - AO353_02575 0.69 +0.7 550,926 - AO353_02575 0.69 -1.0 550,926 - AO353_02575 0.69 -0.6 550,926 - AO353_02575 0.69 +0.0 550,926 - AO353_02575 0.69 -0.5 550,926 - AO353_02575 0.69 +0.8 550,938 + AO353_02575 0.71 -1.8 550,938 + AO353_02575 0.71 +1.0 550,939 - AO353_02575 0.71 +1.8 551,049 - -0.9 551,049 - +0.9 551,074 + +1.6 551,101 + -0.4 551,101 + +0.0 551,101 + -0.7 551,102 - -1.3 551,103 + -0.5 551,103 + -1.2 551,103 + -0.1 551,103 + -0.6 551,104 - -0.7 551,104 - -1.1 551,104 - +0.6 551,104 - -0.1 551,104 - +2.3 551,142 + -2.3 551,142 + +0.2 551,154 + +0.8 551,154 + +1.5 551,154 + +1.1 551,154 + +1.2 551,155 - +0.0 551,155 - +0.7 551,155 - +0.9 551,161 + -0.1 551,162 - -0.6 551,162 - -1.7 551,164 - +0.1 551,186 + +1.5 551,217 + +0.3 551,217 + +1.0 551,218 - -2.0 551,218 - +0.8 551,218 - -0.6 551,218 - +0.5 551,218 - +2.5 551,218 - -0.7 551,218 - +0.2 551,218 - -0.1 551,221 - +0.1 551,221 - -0.3 551,221 - -0.8 551,233 - +0.4 551,233 - +1.4
Or see this region's nucleotide sequence