Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2964 and DvMF_2965 are separated by 203 nucleotides DvMF_2965 and DvMF_2966 are separated by 172 nucleotides DvMF_2966 and DvMF_2967 are separated by 184 nucleotides
DvMF_2964: DvMF_2964 - RNP-1 like RNA-binding protein (RefSeq), at 3,740,246 to 3,740,512
_2964
DvMF_2965: DvMF_2965 - 17 kDa surface antigen (RefSeq), at 3,740,716 to 3,741,174
_2965
DvMF_2966: DvMF_2966 - hypothetical protein (RefSeq), at 3,741,347 to 3,741,901
_2966
DvMF_2967: DvMF_2967 - RarD protein, DMT superfamily transporter (RefSeq), at 3,742,086 to 3,743,000
_2967
Position (kb)
3741
3742 Strain fitness (log2 ratio)
-1
0
1 at 3740.378 kb on + strand, within DvMF_2964 at 3740.398 kb on + strand, within DvMF_2964 at 3740.482 kb on + strand, within DvMF_2964 at 3740.764 kb on - strand, within DvMF_2965 at 3740.846 kb on + strand, within DvMF_2965 at 3741.196 kb on - strand at 3741.601 kb on - strand, within DvMF_2966 at 3741.601 kb on - strand, within DvMF_2966 at 3741.617 kb on - strand, within DvMF_2966 at 3741.634 kb on + strand, within DvMF_2966 at 3741.669 kb on - strand, within DvMF_2966 at 3741.916 kb on - strand at 3741.918 kb on + strand at 3742.027 kb on - strand at 3742.143 kb on - strand at 3742.152 kb on + strand at 3742.615 kb on - strand, within DvMF_2967 at 3742.757 kb on + strand, within DvMF_2967 at 3742.827 kb on - strand, within DvMF_2967
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,740,378 + DvMF_2964 0.49 -0.3 3,740,398 + DvMF_2964 0.57 -0.1 3,740,482 + DvMF_2964 0.88 -0.5 3,740,764 - DvMF_2965 0.10 -0.1 3,740,846 + DvMF_2965 0.28 -0.5 3,741,196 - -0.3 3,741,601 - DvMF_2966 0.46 -0.4 3,741,601 - DvMF_2966 0.46 -1.6 3,741,617 - DvMF_2966 0.49 -0.7 3,741,634 + DvMF_2966 0.52 -0.3 3,741,669 - DvMF_2966 0.58 -1.2 3,741,916 - -0.7 3,741,918 + +0.1 3,742,027 - -0.0 3,742,143 - -0.3 3,742,152 + -0.5 3,742,615 - DvMF_2967 0.58 -0.5 3,742,757 + DvMF_2967 0.73 -0.6 3,742,827 - DvMF_2967 0.81 -0.2
Or see this region's nucleotide sequence