Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2954 and DvMF_2955 overlap by 4 nucleotides DvMF_2955 and DvMF_2956 are separated by 13 nucleotides DvMF_2956 and DvMF_2957 are separated by 346 nucleotides
DvMF_2954: DvMF_2954 - protein of unknown function DUF214 (RefSeq), at 3,726,358 to 3,727,689
_2954
DvMF_2955: DvMF_2955 - ABC transporter related (RefSeq), at 3,727,686 to 3,728,438
_2955
DvMF_2956: DvMF_2956 - efflux transporter, RND family, MFP subunit (RefSeq), at 3,728,452 to 3,729,744
_2956
DvMF_2957: DvMF_2957 - hypothetical protein (RefSeq), at 3,730,091 to 3,731,137
_2957
Position (kb)
3728
3729
3730 Strain fitness (log2 ratio)
-1
0
1 at 3727.562 kb on - strand at 3727.594 kb on + strand at 3727.940 kb on - strand, within DvMF_2955 at 3727.975 kb on - strand, within DvMF_2955 at 3728.153 kb on + strand, within DvMF_2955 at 3728.234 kb on - strand, within DvMF_2955 at 3728.639 kb on - strand, within DvMF_2956 at 3728.801 kb on - strand, within DvMF_2956 at 3728.811 kb on - strand, within DvMF_2956 at 3728.967 kb on - strand, within DvMF_2956 at 3729.001 kb on - strand, within DvMF_2956 at 3729.003 kb on - strand, within DvMF_2956 at 3729.017 kb on - strand, within DvMF_2956 at 3729.190 kb on + strand, within DvMF_2956 at 3729.260 kb on + strand, within DvMF_2956 at 3729.318 kb on - strand, within DvMF_2956 at 3729.390 kb on - strand, within DvMF_2956 at 3729.416 kb on + strand, within DvMF_2956 at 3729.424 kb on - strand, within DvMF_2956 at 3729.965 kb on - strand at 3730.478 kb on + strand, within DvMF_2957
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,727,562 - -0.6 3,727,594 + -0.7 3,727,940 - DvMF_2955 0.34 -0.8 3,727,975 - DvMF_2955 0.38 -0.6 3,728,153 + DvMF_2955 0.62 -1.0 3,728,234 - DvMF_2955 0.73 -0.5 3,728,639 - DvMF_2956 0.14 +0.6 3,728,801 - DvMF_2956 0.27 -1.0 3,728,811 - DvMF_2956 0.28 -0.8 3,728,967 - DvMF_2956 0.40 -0.6 3,729,001 - DvMF_2956 0.42 -0.9 3,729,003 - DvMF_2956 0.43 -0.5 3,729,017 - DvMF_2956 0.44 -0.5 3,729,190 + DvMF_2956 0.57 -1.3 3,729,260 + DvMF_2956 0.62 +0.0 3,729,318 - DvMF_2956 0.67 -0.8 3,729,390 - DvMF_2956 0.73 -0.7 3,729,416 + DvMF_2956 0.75 -0.2 3,729,424 - DvMF_2956 0.75 -1.3 3,729,965 - +0.0 3,730,478 + DvMF_2957 0.37 +0.2
Or see this region's nucleotide sequence