Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2953 and DvMF_2954 overlap by 1 nucleotides DvMF_2954 and DvMF_2955 overlap by 4 nucleotides DvMF_2955 and DvMF_2956 are separated by 13 nucleotides
DvMF_2953: DvMF_2953 - protein of unknown function DUF214 (RefSeq), at 3,725,138 to 3,726,358
_2953
DvMF_2954: DvMF_2954 - protein of unknown function DUF214 (RefSeq), at 3,726,358 to 3,727,689
_2954
DvMF_2955: DvMF_2955 - ABC transporter related (RefSeq), at 3,727,686 to 3,728,438
_2955
DvMF_2956: DvMF_2956 - efflux transporter, RND family, MFP subunit (RefSeq), at 3,728,452 to 3,729,744
_2956
Position (kb)
3726
3727
3728 Strain fitness (log2 ratio)
-2
-1
0
1 at 3725.525 kb on - strand, within DvMF_2953 at 3725.883 kb on + strand, within DvMF_2953 at 3726.110 kb on + strand, within DvMF_2953 at 3726.117 kb on - strand, within DvMF_2953 at 3726.127 kb on + strand, within DvMF_2953 at 3726.248 kb on + strand at 3726.265 kb on + strand at 3726.452 kb on + strand at 3726.618 kb on - strand, within DvMF_2954 at 3726.736 kb on - strand, within DvMF_2954 at 3726.850 kb on + strand, within DvMF_2954 at 3727.100 kb on + strand, within DvMF_2954 at 3727.266 kb on - strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.347 kb on + strand, within DvMF_2954 at 3727.349 kb on - strand, within DvMF_2954 at 3727.562 kb on - strand at 3727.594 kb on + strand at 3727.940 kb on - strand, within DvMF_2955 at 3727.975 kb on - strand, within DvMF_2955 at 3728.153 kb on + strand, within DvMF_2955 at 3728.234 kb on - strand, within DvMF_2955 at 3728.639 kb on - strand, within DvMF_2956
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,725,525 - DvMF_2953 0.32 -0.7 3,725,883 + DvMF_2953 0.61 -1.1 3,726,110 + DvMF_2953 0.80 -1.3 3,726,117 - DvMF_2953 0.80 -0.4 3,726,127 + DvMF_2953 0.81 -1.8 3,726,248 + -0.6 3,726,265 + -0.6 3,726,452 + -0.3 3,726,618 - DvMF_2954 0.20 -1.2 3,726,736 - DvMF_2954 0.28 -1.0 3,726,850 + DvMF_2954 0.37 -1.0 3,727,100 + DvMF_2954 0.56 -0.8 3,727,266 - DvMF_2954 0.68 -0.4 3,727,341 + DvMF_2954 0.74 -1.0 3,727,341 + DvMF_2954 0.74 -0.6 3,727,341 + DvMF_2954 0.74 -0.3 3,727,341 + DvMF_2954 0.74 +0.2 3,727,341 + DvMF_2954 0.74 +0.1 3,727,347 + DvMF_2954 0.74 -0.5 3,727,349 - DvMF_2954 0.74 -1.2 3,727,562 - -0.6 3,727,594 + -0.7 3,727,940 - DvMF_2955 0.34 -0.8 3,727,975 - DvMF_2955 0.38 -0.6 3,728,153 + DvMF_2955 0.62 -1.0 3,728,234 - DvMF_2955 0.73 -0.5 3,728,639 - DvMF_2956 0.14 +0.6
Or see this region's nucleotide sequence