Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2643 and DvMF_2644 are separated by 800 nucleotides DvMF_2644 and DvMF_2645 are separated by 110 nucleotides
DvMF_2643: DvMF_2643 - response regulator receiver modulated CheW protein (RefSeq), at 3,343,209 to 3,344,381
_2643
DvMF_2644: DvMF_2644 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,345,182 to 3,347,155
_2644
DvMF_2645: DvMF_2645 - peptidase U32 (RefSeq), at 3,347,266 to 3,348,558
_2645
Position (kb)
3345
3346
3347
3348 Strain fitness (log2 ratio)
-1
0
1 at 3344.248 kb on - strand, within DvMF_2643 at 3344.344 kb on + strand at 3344.461 kb on - strand at 3344.626 kb on - strand at 3345.458 kb on - strand, within DvMF_2644 at 3345.678 kb on + strand, within DvMF_2644 at 3345.693 kb on + strand, within DvMF_2644 at 3345.712 kb on + strand, within DvMF_2644 at 3345.901 kb on + strand, within DvMF_2644 at 3346.072 kb on - strand, within DvMF_2644 at 3346.283 kb on - strand, within DvMF_2644 at 3346.382 kb on - strand, within DvMF_2644 at 3346.466 kb on - strand, within DvMF_2644 at 3346.748 kb on - strand, within DvMF_2644 at 3346.838 kb on - strand, within DvMF_2644 at 3346.854 kb on + strand, within DvMF_2644 at 3346.902 kb on - strand, within DvMF_2644 at 3347.081 kb on + strand at 3347.311 kb on + strand at 3347.317 kb on - strand at 3347.432 kb on - strand, within DvMF_2645 at 3347.516 kb on - strand, within DvMF_2645 at 3347.924 kb on - strand, within DvMF_2645 at 3348.026 kb on + strand, within DvMF_2645 at 3348.098 kb on + strand, within DvMF_2645
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,344,248 - DvMF_2643 0.89 -0.6 3,344,344 + -0.1 3,344,461 - -0.2 3,344,626 - -0.3 3,345,458 - DvMF_2644 0.14 -0.9 3,345,678 + DvMF_2644 0.25 -0.6 3,345,693 + DvMF_2644 0.26 -1.0 3,345,712 + DvMF_2644 0.27 -0.1 3,345,901 + DvMF_2644 0.36 -0.5 3,346,072 - DvMF_2644 0.45 -0.7 3,346,283 - DvMF_2644 0.56 -1.0 3,346,382 - DvMF_2644 0.61 -1.1 3,346,466 - DvMF_2644 0.65 -1.1 3,346,748 - DvMF_2644 0.79 -0.9 3,346,838 - DvMF_2644 0.84 -0.9 3,346,854 + DvMF_2644 0.85 -0.6 3,346,902 - DvMF_2644 0.87 -0.9 3,347,081 + -1.2 3,347,311 + -0.1 3,347,317 - -0.4 3,347,432 - DvMF_2645 0.13 -0.2 3,347,516 - DvMF_2645 0.19 -0.1 3,347,924 - DvMF_2645 0.51 -0.4 3,348,026 + DvMF_2645 0.59 -0.3 3,348,098 + DvMF_2645 0.64 +0.1
Or see this region's nucleotide sequence