Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2608 and DvMF_2609 are separated by 281 nucleotides DvMF_2609 and DvMF_2610 overlap by 1 nucleotides DvMF_2610 and DvMF_2611 overlap by 8 nucleotides
DvMF_2608: DvMF_2608 - inner-membrane translocator (RefSeq), at 3,295,961 to 3,296,869
_2608
DvMF_2609: DvMF_2609 - inner-membrane translocator (RefSeq), at 3,297,151 to 3,298,398
_2609
DvMF_2610: DvMF_2610 - ABC transporter related (RefSeq), at 3,298,398 to 3,299,210
_2610
DvMF_2611: DvMF_2611 - ABC transporter related (RefSeq), at 3,299,203 to 3,299,907
_2611
Position (kb)
3297
3298
3299 Strain fitness (log2 ratio)
-2
-1
0
1 at 3296.538 kb on - strand, within DvMF_2608 at 3296.848 kb on + strand at 3296.871 kb on - strand at 3296.871 kb on - strand at 3296.999 kb on - strand at 3297.127 kb on - strand at 3297.436 kb on + strand, within DvMF_2609 at 3297.568 kb on + strand, within DvMF_2609 at 3297.754 kb on - strand, within DvMF_2609 at 3298.114 kb on + strand, within DvMF_2609 at 3298.192 kb on - strand, within DvMF_2609 at 3298.714 kb on + strand, within DvMF_2610 at 3298.714 kb on - strand, within DvMF_2610 at 3298.794 kb on + strand, within DvMF_2610 at 3298.802 kb on - strand, within DvMF_2610 at 3298.915 kb on + strand, within DvMF_2610 at 3299.174 kb on + strand at 3299.390 kb on + strand, within DvMF_2611
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,296,538 - DvMF_2608 0.63 -1.2 3,296,848 + -0.9 3,296,871 - -0.2 3,296,871 - -0.4 3,296,999 - -0.2 3,297,127 - -1.0 3,297,436 + DvMF_2609 0.23 -2.4 3,297,568 + DvMF_2609 0.33 -1.1 3,297,754 - DvMF_2609 0.48 -1.1 3,298,114 + DvMF_2609 0.77 -0.8 3,298,192 - DvMF_2609 0.83 -0.8 3,298,714 + DvMF_2610 0.39 -1.5 3,298,714 - DvMF_2610 0.39 -2.5 3,298,794 + DvMF_2610 0.49 -0.8 3,298,802 - DvMF_2610 0.50 -1.6 3,298,915 + DvMF_2610 0.64 -0.9 3,299,174 + -1.6 3,299,390 + DvMF_2611 0.27 -0.5
Or see this region's nucleotide sequence