Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2555 and DvMF_2556 are separated by 95 nucleotides DvMF_2556 and DvMF_2557 are separated by 20 nucleotides DvMF_2557 and DvMF_2558 are separated by 632 nucleotides
DvMF_2555: DvMF_2555 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,229,034 to 3,230,371
_2555
DvMF_2556: DvMF_2556 - hypothetical protein (RefSeq), at 3,230,467 to 3,231,126
_2556
DvMF_2557: DvMF_2557 - hypothetical protein (RefSeq), at 3,231,147 to 3,232,502
_2557
DvMF_2558: DvMF_2558 - hypothetical protein (RefSeq), at 3,233,135 to 3,234,550
_2558
Position (kb)
3231
3232
3233 Strain fitness (log2 ratio)
-1
0
1 at 3230.309 kb on - strand at 3230.455 kb on - strand at 3230.510 kb on + strand at 3230.568 kb on - strand, within DvMF_2556 at 3230.880 kb on - strand, within DvMF_2556 at 3230.975 kb on + strand, within DvMF_2556 at 3231.083 kb on + strand at 3231.083 kb on + strand at 3231.161 kb on + strand at 3231.161 kb on + strand at 3231.205 kb on + strand at 3231.366 kb on + strand, within DvMF_2557 at 3231.634 kb on + strand, within DvMF_2557 at 3231.676 kb on + strand, within DvMF_2557 at 3231.746 kb on - strand, within DvMF_2557 at 3231.836 kb on + strand, within DvMF_2557 at 3231.842 kb on + strand, within DvMF_2557 at 3231.852 kb on - strand, within DvMF_2557 at 3231.852 kb on - strand, within DvMF_2557 at 3231.964 kb on - strand, within DvMF_2557 at 3232.858 kb on + strand at 3233.051 kb on + strand at 3233.066 kb on + strand at 3233.074 kb on - strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.076 kb on + strand at 3233.155 kb on + strand at 3233.400 kb on + strand, within DvMF_2558 at 3233.444 kb on - strand, within DvMF_2558
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,230,309 - +0.5 3,230,455 - +0.1 3,230,510 + +0.8 3,230,568 - DvMF_2556 0.15 +0.9 3,230,880 - DvMF_2556 0.63 +0.9 3,230,975 + DvMF_2556 0.77 +0.6 3,231,083 + +0.8 3,231,083 + +0.9 3,231,161 + +0.8 3,231,161 + +1.0 3,231,205 + +0.7 3,231,366 + DvMF_2557 0.16 +0.9 3,231,634 + DvMF_2557 0.36 +0.8 3,231,676 + DvMF_2557 0.39 +0.9 3,231,746 - DvMF_2557 0.44 +1.0 3,231,836 + DvMF_2557 0.51 +1.2 3,231,842 + DvMF_2557 0.51 +0.7 3,231,852 - DvMF_2557 0.52 +0.9 3,231,852 - DvMF_2557 0.52 +1.0 3,231,964 - DvMF_2557 0.60 +0.9 3,232,858 + +0.2 3,233,051 + -0.2 3,233,066 + -0.3 3,233,074 - +0.0 3,233,076 + +0.3 3,233,076 + +0.7 3,233,076 + +0.0 3,233,155 + +0.4 3,233,400 + DvMF_2558 0.19 +0.4 3,233,444 - DvMF_2558 0.22 +0.4
Or see this region's nucleotide sequence